RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 KIAA0586Q9BVV6 1533 aa14.01□□□□□ -0.17
HDGFL3-205ENST00000568129 JPH4Q96JJ6 628 aa14.01□□□□□ -0.17
HDGFL3-205ENST00000568129 PRG4Q92954 1404 aaPredicted RBP13.96□□□□□ -0.18
HDGFL3-205ENST00000568129 RAPGEF2Q9Y4G8 1499 aa13.95□□□□□ -0.18
HDGFL3-205ENST00000568129 PRXQ9BXM0 1461 aa13.92□□□□□ -0.18
HDGFL3-205ENST00000568129 IQGAP2Q13576 1575 aa13.89□□□□□ -0.19
HDGFL3-205ENST00000568129 EEA1Q15075 1411 aa13.87□□□□□ -0.19
HDGFL3-205ENST00000568129 UGGT2Q9NYU1 1516 aa13.86□□□□□ -0.19
HDGFL3-205ENST00000568129 CTTNBP2Q8WZ74 1663 aa13.85□□□□□ -0.19
HDGFL3-205ENST00000568129 CHIC1Q5VXU3 224 aa13.83□□□□□ -0.2
HDGFL3-205ENST00000568129 CSRNP3Q8WYN3 585 aa13.83□□□□□ -0.2
HDGFL3-205ENST00000568129 DISP1Q96F81 1524 aa13.83□□□□□ -0.2
HDGFL3-205ENST00000568129 CARMIL2Q6F5E8 1435 aa13.81□□□□□ -0.2
HDGFL3-205ENST00000568129 ADCY10Q96PN6 1610 aa13.8□□□□□ -0.2
HDGFL3-205ENST00000568129 TNIKQ9UKE5 1360 aa13.8□□□□□ -0.2
HDGFL3-205ENST00000568129 PTPRGP23470 1445 aa13.78□□□□□ -0.2
HDGFL3-205ENST00000568129 KIAA0556O60303 1618 aa13.77□□□□□ -0.21
HDGFL3-205ENST00000568129 KIF13AQ9H1H9 1805 aa13.76□□□□□ -0.21
HDGFL3-205ENST00000568129 MAPKBP1O60336 1514 aa13.75□□□□□ -0.21
HDGFL3-205ENST00000568129 UHRF1BP1LA0JNW5 1464 aa13.75□□□□□ -0.21
HDGFL3-205ENST00000568129 TRHP20396 242 aaPredicted RBP13.74□□□□□ -0.21
HDGFL3-205ENST00000568129 KIF21BO75037 1637 aa13.74□□□□□ -0.21
HDGFL3-205ENST00000568129 GOLGA3Q08378 1498 aa13.73□□□□□ -0.21
HDGFL3-205ENST00000568129 UACAQ9BZF9 1416 aa13.71□□□□□ -0.22
HDGFL3-205ENST00000568129 ABCC2Q92887 1545 aa13.69□□□□□ -0.22
HDGFL3-205ENST00000568129 ABCC10Q5T3U5 1492 aa13.68□□□□□ -0.22
HDGFL3-205ENST00000568129 SAMD9Q5K651 1589 aa13.68□□□□□ -0.22
HDGFL3-205ENST00000568129 NPM1P06748 294 aaKnown RBP eCLIP13.68□□□□□ -0.22
HDGFL3-205ENST00000568129 KDM5BQ9UGL1 1544 aa13.68□□□□□ -0.22
HDGFL3-205ENST00000568129 ABCA8O94911 1581 aa13.65□□□□□ -0.22
HDGFL3-205ENST00000568129 DIP2BQ9P265 1576 aa13.65□□□□□ -0.22
HDGFL3-205ENST00000568129 FAM9AQ8IZU1 332 aaPredicted RBP13.62□□□□□ -0.23
HDGFL3-205ENST00000568129 PLB1Q6P1J6 1458 aa13.61□□□□□ -0.23
HDGFL3-205ENST00000568129 ZCCHC11Q5TAX3 1644 aaKnown RBP13.61□□□□□ -0.23
HDGFL3-205ENST00000568129 GLI2P10070 1586 aa13.61□□□□□ -0.23
HDGFL3-205ENST00000568129 ASXL2Q76L83 1435 aa13.6□□□□□ -0.23
HDGFL3-205ENST00000568129 FAM69CQ0P6D2 419 aa13.58□□□□□ -0.24
HDGFL3-205ENST00000568129 EFCAB5A4FU69 1503 aa13.57□□□□□ -0.24
HDGFL3-205ENST00000568129 TTBK1Q5TCY1 1321 aaPredicted RBP13.57□□□□□ -0.24
HDGFL3-205ENST00000568129 EPRSP07814 1512 aaKnown RBP13.54□□□□□ -0.24
HDGFL3-205ENST00000568129 PPRC1Q5VV67 1664 aaKnown RBP13.54□□□□□ -0.24
HDGFL3-205ENST00000568129 RAPGEF6Q8TEU7 1601 aa13.53□□□□□ -0.24
HDGFL3-205ENST00000568129 TSPOAP1O95153 1857 aa13.53□□□□□ -0.24
HDGFL3-205ENST00000568129 ATP10BO94823 1461 aa13.53□□□□□ -0.24
HDGFL3-205ENST00000568129 MAP3K4Q9Y6R4 1608 aa13.53□□□□□ -0.24
HDGFL3-205ENST00000568129 P3H3Q8IVL6 736 aa13.52□□□□□ -0.25
HDGFL3-205ENST00000568129 WDR7Q9Y4E6 1490 aa13.52□□□□□ -0.25
HDGFL3-205ENST00000568129 UBTFP17480 764 aaKnown RBP13.5□□□□□ -0.25
HDGFL3-205ENST00000568129 FHOD3Q2V2M9 1422 aa13.49□□□□□ -0.25
HDGFL3-205ENST00000568129 ARHGAP35Q9NRY4 1499 aa13.48□□□□□ -0.25
HDGFL3-205ENST00000568129 NUP153P49790 1475 aaKnown RBP13.48□□□□□ -0.25
HDGFL3-205ENST00000568129 CFAP43Q8NDM7 1665 aa13.47□□□□□ -0.25
HDGFL3-205ENST00000568129 MAGI3Q5TCQ9 1506 aa13.44□□□□□ -0.26
HDGFL3-205ENST00000568129 FMN1Q68DA7 1419 aa13.43□□□□□ -0.26
HDGFL3-205ENST00000568129 ABCA9Q8IUA7 1624 aa13.42□□□□□ -0.26
HDGFL3-205ENST00000568129 RANGAP1P46060 587 aaPredicted RBP13.41□□□□□ -0.26
HDGFL3-205ENST00000568129 KDM6BO15054 1643 aa13.41□□□□□ -0.26
HDGFL3-205ENST00000568129 TEX14Q8IWB6 1497 aa13.41□□□□□ -0.26
HDGFL3-205ENST00000568129 CD109Q6YHK3 1445 aa13.39□□□□□ -0.27
HDGFL3-205ENST00000568129 COL17A1Q9UMD9 1497 aaPredicted RBP13.38□□□□□ -0.27
HDGFL3-205ENST00000568129 KCNH8Q96L42 1107 aa13.38□□□□□ -0.27
HDGFL3-205ENST00000568129 LRRIQ1Q96JM4 1722 aa13.37□□□□□ -0.27
HDGFL3-205ENST00000568129 EHMT2Q96KQ7 1210 aa13.37□□□□□ -0.27
HDGFL3-205ENST00000568129 HECW1Q76N89 1606 aa13.37□□□□□ -0.27
HDGFL3-205ENST00000568129 PLEKHD1A6NEE1 506 aa13.35□□□□□ -0.27
HDGFL3-205ENST00000568129 PHLDB1Q86UU1 1377 aa13.34□□□□□ -0.27
HDGFL3-205ENST00000568129 ARID3CA6NKF2 412 aa13.34□□□□□ -0.27
HDGFL3-205ENST00000568129 ARAP3Q8WWN8 1544 aa13.34□□□□□ -0.27
HDGFL3-205ENST00000568129 CASKIN1Q8WXD9 1431 aa13.33□□□□□ -0.28
HDGFL3-205ENST00000568129 CDK13Q14004 1512 aaKnown RBP13.33□□□□□ -0.28
HDGFL3-205ENST00000568129 CLIP1P30622 1438 aa13.32□□□□□ -0.28
HDGFL3-205ENST00000568129 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.32□□□□□ -0.28
HDGFL3-205ENST00000568129 NEO1Q92859 1461 aa13.3□□□□□ -0.28
HDGFL3-205ENST00000568129 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.3□□□□□ -0.28
HDGFL3-205ENST00000568129 HNRNPUL2Q1KMD3 747 aaKnown RBP13.3□□□□□ -0.28
HDGFL3-205ENST00000568129 PCF11O94913 1555 aaKnown RBP13.28□□□□□ -0.28
HDGFL3-205ENST00000568129 FYCO1Q9BQS8 1478 aa13.28□□□□□ -0.28
HDGFL3-205ENST00000568129 CDK11AQ9UQ88 783 aaPredicted RBP13.27□□□□□ -0.29
HDGFL3-205ENST00000568129 CCDC18Q5T9S5 1454 aa13.27□□□□□ -0.29
HDGFL3-205ENST00000568129 TTC37Q6PGP7 1564 aa13.27□□□□□ -0.29
HDGFL3-205ENST00000568129 TROQ12816 1431 aaPredicted RBP13.26□□□□□ -0.29
HDGFL3-205ENST00000568129 CFAP74Q9C0B2 1584 aa13.24□□□□□ -0.29
HDGFL3-205ENST00000568129 PLCH2O75038 1416 aa13.24□□□□□ -0.29
HDGFL3-205ENST00000568129 CEP162Q5TB80 1403 aa13.24□□□□□ -0.29
HDGFL3-205ENST00000568129 MYO5CQ9NQX4 1742 aa13.23□□□□□ -0.29
HDGFL3-205ENST00000568129 KIF14Q15058 1648 aa13.23□□□□□ -0.29
HDGFL3-205ENST00000568129 RICTORQ6R327 1708 aa13.22□□□□□ -0.29
HDGFL3-205ENST00000568129 FRMPD1Q5SYB0 1578 aa13.21□□□□□ -0.29
HDGFL3-205ENST00000568129 LOC105371045A0A1W2PR82 267 aa13.21□□□□□ -0.29
HDGFL3-205ENST00000568129 ATP1B4Q9UN42 357 aaPredicted RBP13.21□□□□□ -0.29
HDGFL3-205ENST00000568129 CDC42BPBQ9Y5S2 1711 aa13.21□□□□□ -0.3
HDGFL3-205ENST00000568129 FANCAO15360 1455 aa13.21□□□□□ -0.3
HDGFL3-205ENST00000568129 AKNAQ7Z591 1439 aa13.21□□□□□ -0.3
HDGFL3-205ENST00000568129 KDM4FA0A1W2PPD8 638 aa13.19□□□□□ -0.3
HDGFL3-205ENST00000568129 CDC42BPAQ5VT25 1732 aa13.17□□□□□ -0.3
HDGFL3-205ENST00000568129 DENND4BO75064 1496 aaPredicted RBP13.16□□□□□ -0.3
HDGFL3-205ENST00000568129 RAPGEF3O95398 923 aa13.16□□□□□ -0.3
HDGFL3-205ENST00000568129 ZMYM4Q5VZL5 1548 aa13.16□□□□□ -0.3
HDGFL3-205ENST00000568129 PREX2Q70Z35 1606 aa13.15□□□□□ -0.3
HDGFL3-205ENST00000568129 EFCAB2Q5VUJ9 269 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms