RNA–Protein interactions for RNA: ENST00000567133.1

CNOT1-210, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-210ENST00000567133 SHROOM2Q13796 1616 aa18.69■□□□□ 0.58
CNOT1-210ENST00000567133 TRHP20396 242 aaPredicted RBP18.67■□□□□ 0.58
CNOT1-210ENST00000567133 JPH4Q96JJ6 628 aa18.67■□□□□ 0.58
CNOT1-210ENST00000567133 PRG4Q92954 1404 aaPredicted RBP18.66■□□□□ 0.58
CNOT1-210ENST00000567133 KIAA0586Q9BVV6 1533 aa18.59■□□□□ 0.57
CNOT1-210ENST00000567133 TTBK1Q5TCY1 1321 aaPredicted RBP18.57■□□□□ 0.56
CNOT1-210ENST00000567133 CHIC1Q5VXU3 224 aa18.57■□□□□ 0.56
CNOT1-210ENST00000567133 RAPGEF2Q9Y4G8 1499 aa18.55■□□□□ 0.56
CNOT1-210ENST00000567133 IQGAP2Q13576 1575 aa18.51■□□□□ 0.55
CNOT1-210ENST00000567133 FAM9AQ8IZU1 332 aaPredicted RBP18.46■□□□□ 0.55
CNOT1-210ENST00000567133 CARMIL2Q6F5E8 1435 aa18.43■□□□□ 0.54
CNOT1-210ENST00000567133 CTTNBP2Q8WZ74 1663 aa18.41■□□□□ 0.54
CNOT1-210ENST00000567133 PTPRGP23470 1445 aa18.4■□□□□ 0.54
CNOT1-210ENST00000567133 PRXQ9BXM0 1461 aa18.4■□□□□ 0.54
CNOT1-210ENST00000567133 NPM1P06748 294 aaKnown RBP eCLIP18.4■□□□□ 0.54
CNOT1-210ENST00000567133 ADCY10Q96PN6 1610 aa18.4■□□□□ 0.54
CNOT1-210ENST00000567133 CSRNP3Q8WYN3 585 aa18.39■□□□□ 0.53
CNOT1-210ENST00000567133 TNIKQ9UKE5 1360 aa18.39■□□□□ 0.53
CNOT1-210ENST00000567133 DISP1Q96F81 1524 aa18.37■□□□□ 0.53
CNOT1-210ENST00000567133 UGGT2Q9NYU1 1516 aa18.36■□□□□ 0.53
CNOT1-210ENST00000567133 EHMT2Q96KQ7 1210 aa18.33■□□□□ 0.52
CNOT1-210ENST00000567133 KIAA0556O60303 1618 aa18.33■□□□□ 0.52
CNOT1-210ENST00000567133 RANGAP1P46060 587 aaPredicted RBP18.31■□□□□ 0.52
CNOT1-210ENST00000567133 EEA1Q15075 1411 aa18.31■□□□□ 0.52
CNOT1-210ENST00000567133 KIF13AQ9H1H9 1805 aa18.28■□□□□ 0.52
CNOT1-210ENST00000567133 P3H3Q8IVL6 736 aa18.28■□□□□ 0.52
CNOT1-210ENST00000567133 FAM69CQ0P6D2 419 aa18.27■□□□□ 0.52
CNOT1-210ENST00000567133 UACAQ9BZF9 1416 aa18.26■□□□□ 0.51
CNOT1-210ENST00000567133 GOLGA3Q08378 1498 aa18.26■□□□□ 0.51
CNOT1-210ENST00000567133 MAPKBP1O60336 1514 aa18.25■□□□□ 0.51
CNOT1-210ENST00000567133 ABCC2Q92887 1545 aa18.23■□□□□ 0.51
CNOT1-210ENST00000567133 ABCC10Q5T3U5 1492 aa18.22■□□□□ 0.51
CNOT1-210ENST00000567133 PLB1Q6P1J6 1458 aa18.2■□□□□ 0.5
CNOT1-210ENST00000567133 DIP2BQ9P265 1576 aa18.2■□□□□ 0.5
CNOT1-210ENST00000567133 UHRF1BP1LA0JNW5 1464 aa18.2■□□□□ 0.5
CNOT1-210ENST00000567133 TSPOAP1O95153 1857 aa18.18■□□□□ 0.5
CNOT1-210ENST00000567133 ARID3CA6NKF2 412 aa18.18■□□□□ 0.5
CNOT1-210ENST00000567133 KIF21BO75037 1637 aa18.18■□□□□ 0.5
CNOT1-210ENST00000567133 ASXL2Q76L83 1435 aa18.17■□□□□ 0.5
CNOT1-210ENST00000567133 ZCCHC11Q5TAX3 1644 aaKnown RBP18.16■□□□□ 0.5
CNOT1-210ENST00000567133 UBTFP17480 764 aaKnown RBP18.15■□□□□ 0.5
CNOT1-210ENST00000567133 KDM5BQ9UGL1 1544 aa18.13■□□□□ 0.49
CNOT1-210ENST00000567133 ABCA8O94911 1581 aa18.13■□□□□ 0.49
CNOT1-210ENST00000567133 SAMD9Q5K651 1589 aa18.12■□□□□ 0.49
CNOT1-210ENST00000567133 FHOD3Q2V2M9 1422 aa18.09■□□□□ 0.49
CNOT1-210ENST00000567133 KCNH8Q96L42 1107 aa18.05■□□□□ 0.48
CNOT1-210ENST00000567133 EPRSP07814 1512 aaKnown RBP18.04■□□□□ 0.48
CNOT1-210ENST00000567133 WDR7Q9Y4E6 1490 aa18.03■□□□□ 0.48
CNOT1-210ENST00000567133 RAPGEF6Q8TEU7 1601 aa18.03■□□□□ 0.48
CNOT1-210ENST00000567133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.03■□□□□ 0.48
CNOT1-210ENST00000567133 HNRNPUL2Q1KMD3 747 aaKnown RBP18.03■□□□□ 0.48
CNOT1-210ENST00000567133 GLI2P10070 1586 aa18.02■□□□□ 0.48
CNOT1-210ENST00000567133 KDM6BO15054 1643 aa18.01■□□□□ 0.47
CNOT1-210ENST00000567133 EFCAB5A4FU69 1503 aa17.99■□□□□ 0.47
CNOT1-210ENST00000567133 ATP10BO94823 1461 aa17.99■□□□□ 0.47
CNOT1-210ENST00000567133 PPRC1Q5VV67 1664 aaKnown RBP17.99■□□□□ 0.47
CNOT1-210ENST00000567133 MAP3K4Q9Y6R4 1608 aa17.98■□□□□ 0.47
CNOT1-210ENST00000567133 ATP1B4Q9UN42 357 aaPredicted RBP17.96■□□□□ 0.47
CNOT1-210ENST00000567133 NUP153P49790 1475 aaKnown RBP17.94■□□□□ 0.46
CNOT1-210ENST00000567133 ARHGAP35Q9NRY4 1499 aa17.92■□□□□ 0.46
CNOT1-210ENST00000567133 CD109Q6YHK3 1445 aa17.9■□□□□ 0.46
CNOT1-210ENST00000567133 TEX14Q8IWB6 1497 aa17.9■□□□□ 0.46
CNOT1-210ENST00000567133 CFAP43Q8NDM7 1665 aa17.89■□□□□ 0.45
CNOT1-210ENST00000567133 CDK13Q14004 1512 aaKnown RBP17.86■□□□□ 0.45
CNOT1-210ENST00000567133 FMN1Q68DA7 1419 aa17.84■□□□□ 0.45
CNOT1-210ENST00000567133 PLEKHD1A6NEE1 506 aa17.84■□□□□ 0.45
CNOT1-210ENST00000567133 COL17A1Q9UMD9 1497 aaPredicted RBP17.83■□□□□ 0.45
CNOT1-210ENST00000567133 HECW1Q76N89 1606 aa17.82■□□□□ 0.44
CNOT1-210ENST00000567133 MAGI3Q5TCQ9 1506 aa17.82■□□□□ 0.44
CNOT1-210ENST00000567133 ABCA9Q8IUA7 1624 aa17.8■□□□□ 0.44
CNOT1-210ENST00000567133 CLIP1P30622 1438 aa17.78■□□□□ 0.44
CNOT1-210ENST00000567133 PCF11O94913 1555 aaKnown RBP17.75■□□□□ 0.43
CNOT1-210ENST00000567133 LRRIQ1Q96JM4 1722 aa17.74■□□□□ 0.43
CNOT1-210ENST00000567133 TTC37Q6PGP7 1564 aa17.73■□□□□ 0.43
CNOT1-210ENST00000567133 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.72■□□□□ 0.43
CNOT1-210ENST00000567133 LOC105371045A0A1W2PR82 267 aa17.71■□□□□ 0.43
CNOT1-210ENST00000567133 CDK11AQ9UQ88 783 aaPredicted RBP17.7■□□□□ 0.42
CNOT1-210ENST00000567133 CASKIN1Q8WXD9 1431 aa17.69■□□□□ 0.42
CNOT1-210ENST00000567133 RAPGEF3O95398 923 aa17.68■□□□□ 0.42
CNOT1-210ENST00000567133 KIF14Q15058 1648 aa17.67■□□□□ 0.42
CNOT1-210ENST00000567133 ARAP3Q8WWN8 1544 aa17.67■□□□□ 0.42
CNOT1-210ENST00000567133 KDM4FA0A1W2PPD8 638 aa17.66■□□□□ 0.42
CNOT1-210ENST00000567133 FANCAO15360 1455 aa17.66■□□□□ 0.42
CNOT1-210ENST00000567133 NEO1Q92859 1461 aa17.66■□□□□ 0.42
CNOT1-210ENST00000567133 CEP162Q5TB80 1403 aa17.65■□□□□ 0.42
CNOT1-210ENST00000567133 TROQ12816 1431 aaPredicted RBP17.64■□□□□ 0.42
CNOT1-210ENST00000567133 CCDC18Q5T9S5 1454 aa17.63■□□□□ 0.41
CNOT1-210ENST00000567133 FYCO1Q9BQS8 1478 aa17.63■□□□□ 0.41
CNOT1-210ENST00000567133 PHLDB1Q86UU1 1377 aa17.63■□□□□ 0.41
CNOT1-210ENST00000567133 AKNAQ7Z591 1439 aa17.63■□□□□ 0.41
CNOT1-210ENST00000567133 ADGRL1O94910 1474 aa17.63■□□□□ 0.41
CNOT1-210ENST00000567133 CFAP74Q9C0B2 1584 aa17.62■□□□□ 0.41
CNOT1-210ENST00000567133 MYO5CQ9NQX4 1742 aa17.62■□□□□ 0.41
CNOT1-210ENST00000567133 FRMPD1Q5SYB0 1578 aa17.6■□□□□ 0.41
CNOT1-210ENST00000567133 DENND4BO75064 1496 aaPredicted RBP17.59■□□□□ 0.41
CNOT1-210ENST00000567133 PLCH2O75038 1416 aa17.59■□□□□ 0.41
CNOT1-210ENST00000567133 ARHGAP5Q13017 1502 aa17.57■□□□□ 0.4
CNOT1-210ENST00000567133 RICTORQ6R327 1708 aa17.55■□□□□ 0.4
CNOT1-210ENST00000567133 EFCAB2Q5VUJ9 269 aa17.55■□□□□ 0.4
CNOT1-210ENST00000567133 SCAPERQ9BY12 1400 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms