RNA–Protein interactions for RNA: ENST00000567133.1

CNOT1-210, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-210ENST00000567133 NISCHQ9Y2I1 1504 aa26.81■■□□□ 1.88
CNOT1-210ENST00000567133 CCDC180Q9P1Z9 1646 aa23.89■■□□□ 1.42
CNOT1-210ENST00000567133 ABCC9O60706 1549 aa23.69■■□□□ 1.38
CNOT1-210ENST00000567133 DCAF8L2P0C7V8 631 aa22.69■■□□□ 1.22
CNOT1-210ENST00000567133 RB1CC1Q8TDY2 1594 aa22.61■■□□□ 1.21
CNOT1-210ENST00000567133 NACADO15069 1562 aa22.5■■□□□ 1.19
CNOT1-210ENST00000567133 ZCCHC6Q5VYS8 1495 aaKnown RBP22.29■■□□□ 1.16
CNOT1-210ENST00000567133 MYO15BQ96JP2 1530 aa22.21■■□□□ 1.15
CNOT1-210ENST00000567133 UNC13AQ9UPW8 1703 aa22.14■■□□□ 1.14
CNOT1-210ENST00000567133 PABPN1Q86U42 306 aaKnown RBP eCLIP22.14■■□□□ 1.13
CNOT1-210ENST00000567133 DCAF1Q9Y4B6 1507 aa22.07■■□□□ 1.12
CNOT1-210ENST00000567133 SCRIBQ14160 1630 aa21.93■■□□□ 1.1
CNOT1-210ENST00000567133 BICRAQ9NZM4 1560 aa21.93■■□□□ 1.1
CNOT1-210ENST00000567133 DNAJC5BQ9UF47 199 aa21.88■■□□□ 1.09
CNOT1-210ENST00000567133 SHROOM4Q9ULL8 1493 aa21.56■■□□□ 1.04
CNOT1-210ENST00000567133 CC2D2AQ9P2K1 1620 aa21.37■■□□□ 1.01
CNOT1-210ENST00000567133 EIF4G1Q04637 1599 aaKnown RBP21.37■■□□□ 1.01
CNOT1-210ENST00000567133 CECR2Q9BXF3 1484 aa21.26■□□□□ 0.99
CNOT1-210ENST00000567133 SMARCA4P51532 1647 aa20.87■□□□□ 0.93
CNOT1-210ENST00000567133 BAZ1AQ9NRL2 1556 aaPredicted RBP20.79■□□□□ 0.92
CNOT1-210ENST00000567133 ATAD2BQ9ULI0 1458 aa20.78■□□□□ 0.92
CNOT1-210ENST00000567133 NCAPD3P42695 1498 aa20.75■□□□□ 0.91
CNOT1-210ENST00000567133 SMARCA2P51531 1590 aa20.74■□□□□ 0.91
CNOT1-210ENST00000567133 MROH2BQ7Z745 1585 aa20.72■□□□□ 0.91
CNOT1-210ENST00000567133 HMGXB3Q12766 1538 aa20.64■□□□□ 0.9
CNOT1-210ENST00000567133 BAZ1BQ9UIG0 1483 aaKnown RBP20.64■□□□□ 0.89
CNOT1-210ENST00000567133 PEG3Q9GZU2 1588 aa20.58■□□□□ 0.88
CNOT1-210ENST00000567133 WIZO95785 1651 aa20.52■□□□□ 0.88
CNOT1-210ENST00000567133 NESP48681 1621 aa20.44■□□□□ 0.86
CNOT1-210ENST00000567133 ERCC6Q03468 1493 aa20.43■□□□□ 0.86
CNOT1-210ENST00000567133 RSF1Q96T23 1441 aaPredicted RBP20.38■□□□□ 0.85
CNOT1-210ENST00000567133 LAMC3Q9Y6N6 1575 aa20.25■□□□□ 0.83
CNOT1-210ENST00000567133 TOP2AP11388 1531 aaKnown RBP20.22■□□□□ 0.83
CNOT1-210ENST00000567133 KIF21AQ7Z4S6 1674 aa20.18■□□□□ 0.82
CNOT1-210ENST00000567133 CADPSQ9ULU8 1353 aa20.18■□□□□ 0.82
CNOT1-210ENST00000567133 CUX2O14529 1486 aa20.16■□□□□ 0.82
CNOT1-210ENST00000567133 PDS5BQ9NTI5 1447 aa20.15■□□□□ 0.82
CNOT1-210ENST00000567133 THOC2Q8NI27 1593 aaKnown RBP20.1■□□□□ 0.81
CNOT1-210ENST00000567133 CCDC88BA6NC98 1476 aa20.01■□□□□ 0.79
CNOT1-210ENST00000567133 CFTRP13569 1480 aa20■□□□□ 0.79
CNOT1-210ENST00000567133 FANCD2Q9BXW9 1451 aa19.99■□□□□ 0.79
CNOT1-210ENST00000567133 MRC2Q9UBG0 1479 aa19.98■□□□□ 0.79
CNOT1-210ENST00000567133 CEP164Q9UPV0 1460 aa19.98■□□□□ 0.79
CNOT1-210ENST00000567133 SUPT5HO00267 1087 aaKnown RBP19.91■□□□□ 0.78
CNOT1-210ENST00000567133 WDR62O43379 1518 aa19.88■□□□□ 0.77
CNOT1-210ENST00000567133 PRDM2Q13029 1718 aa19.88■□□□□ 0.77
CNOT1-210ENST00000567133 URB2Q14146 1524 aaKnown RBP19.8■□□□□ 0.76
CNOT1-210ENST00000567133 DNAJC5Q9H3Z4 198 aa19.78■□□□□ 0.76
CNOT1-210ENST00000567133 TOPBP1Q92547 1522 aa19.65■□□□□ 0.74
CNOT1-210ENST00000567133 DNMBPQ6XZF7 1577 aa19.59■□□□□ 0.73
CNOT1-210ENST00000567133 ABCC8Q09428 1581 aa19.56■□□□□ 0.72
CNOT1-210ENST00000567133 IFT140Q96RY7 1462 aa19.53■□□□□ 0.72
CNOT1-210ENST00000567133 ZNF608Q9ULD9 1512 aaPredicted RBP19.52■□□□□ 0.72
CNOT1-210ENST00000567133 POLA1P09884 1462 aaPredicted RBP19.46■□□□□ 0.71
CNOT1-210ENST00000567133 CUX1P39880 1505 aa19.45■□□□□ 0.7
CNOT1-210ENST00000567133 RAD54L2Q9Y4B4 1467 aa19.43■□□□□ 0.7
CNOT1-210ENST00000567133 EIF4G3O43432 1585 aaKnown RBP19.43■□□□□ 0.7
CNOT1-210ENST00000567133 FGD5Q6ZNL6 1462 aa19.41■□□□□ 0.7
CNOT1-210ENST00000567133 TARBP1Q13395 1621 aaKnown RBP19.41■□□□□ 0.7
CNOT1-210ENST00000567133 SOGA1O94964 1423 aa19.4■□□□□ 0.7
CNOT1-210ENST00000567133 AQRO60306 1485 aaKnown RBP eCLIP19.4■□□□□ 0.74e-7■■■■□ 23.1
CNOT1-210ENST00000567133 OSCARQ8IYS5 282 aa19.35■□□□□ 0.69
CNOT1-210ENST00000567133 TDRD9Q8NDG6 1382 aaKnown RBP19.34■□□□□ 0.69
CNOT1-210ENST00000567133 AEBP2Q6ZN18 517 aaPredicted RBP19.3■□□□□ 0.68
CNOT1-210ENST00000567133 FBLN2P98095 1184 aa19.29■□□□□ 0.68
CNOT1-210ENST00000567133 CHD1O14646 1710 aa19.25■□□□□ 0.67
CNOT1-210ENST00000567133 WRNQ14191 1432 aaPredicted RBP eCLIP19.25■□□□□ 0.67
CNOT1-210ENST00000567133 SYNJ1O43426 1573 aa19.23■□□□□ 0.67
CNOT1-210ENST00000567133 WDR97A6NE52 1622 aa19.22■□□□□ 0.67
CNOT1-210ENST00000567133 TRIM41Q8WV44 630 aa19.22■□□□□ 0.67
CNOT1-210ENST00000567133 SNAPC4Q5SXM2 1469 aa19.21■□□□□ 0.67
CNOT1-210ENST00000567133 TOP2BQ02880 1626 aa19.19■□□□□ 0.66
CNOT1-210ENST00000567133 BIVM-ERCC5R4GMW8 1640 aa19.19■□□□□ 0.66
CNOT1-210ENST00000567133 GRIN2BQ13224 1484 aa19.16■□□□□ 0.66
CNOT1-210ENST00000567133 PBRM1Q86U86 1689 aa19.16■□□□□ 0.66
CNOT1-210ENST00000567133 GAPVD1Q14C86 1478 aa19.16■□□□□ 0.66
CNOT1-210ENST00000567133 ABCA10Q8WWZ4 1543 aa19.15■□□□□ 0.66
CNOT1-210ENST00000567133 CHMP7Q8WUX9 453 aaPredicted RBP19.13■□□□□ 0.65
CNOT1-210ENST00000567133 ABCA5Q8WWZ7 1642 aa19.12■□□□□ 0.65
CNOT1-210ENST00000567133 MAGI1Q96QZ7 1491 aaPredicted RBP19.11■□□□□ 0.65
CNOT1-210ENST00000567133 RIMBP3CA6NJZ7 1639 aa19.09■□□□□ 0.65
CNOT1-210ENST00000567133 RIMBP3BA6NNM3 1639 aa19.09■□□□□ 0.65
CNOT1-210ENST00000567133 RIMBP3Q9UFD9 1639 aa19.09■□□□□ 0.65
CNOT1-210ENST00000567133 SYNJ2O15056 1496 aa19.05■□□□□ 0.64
CNOT1-210ENST00000567133 ARHGEF11O15085 1522 aa19.04■□□□□ 0.64
CNOT1-210ENST00000567133 ADAMTS12P58397 1594 aa18.97■□□□□ 0.63
CNOT1-210ENST00000567133 CLASP1Q7Z460 1538 aa18.95■□□□□ 0.62
CNOT1-210ENST00000567133 CYB5RLQ6IPT4 315 aa18.95■□□□□ 0.62
CNOT1-210ENST00000567133 GRIN2AQ12879 1464 aa18.92■□□□□ 0.62
CNOT1-210ENST00000567133 ERICH3Q5RHP9 1530 aa18.92■□□□□ 0.62
CNOT1-210ENST00000567133 FHAD1B1AJZ9 1412 aa18.91■□□□□ 0.62
CNOT1-210ENST00000567133 ARAP1Q96P48 1450 aa18.88■□□□□ 0.61
CNOT1-210ENST00000567133 CEP170Q5SW79 1584 aa18.86■□□□□ 0.61
CNOT1-210ENST00000567133 KIF27Q86VH2 1401 aa18.85■□□□□ 0.61
CNOT1-210ENST00000567133 NUP160Q12769 1436 aa18.81■□□□□ 0.6
CNOT1-210ENST00000567133 IGF1RP08069 1367 aa18.78■□□□□ 0.6
CNOT1-210ENST00000567133 ERCC6L2Q5T890 1561 aa18.76■□□□□ 0.59
CNOT1-210ENST00000567133 CUL7Q14999 1698 aa18.74■□□□□ 0.59
CNOT1-210ENST00000567133 RUSC2Q8N2Y8 1516 aa18.69■□□□□ 0.58
CNOT1-210ENST00000567133 CARMIL1Q5VZK9 1371 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms