RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 PRG4Q92954 1404 aaPredicted RBP25.28■■□□□ 1.64
FANCA-220ENST00000566409 TRHP20396 242 aaPredicted RBP25.26■■□□□ 1.63
FANCA-220ENST00000566409 CARMIL1Q5VZK9 1371 aa25.25■■□□□ 1.63
FANCA-220ENST00000566409 KIAA0586Q9BVV6 1533 aa25.21■■□□□ 1.63
FANCA-220ENST00000566409 RAPGEF2Q9Y4G8 1499 aa25.04■■□□□ 1.6
FANCA-220ENST00000566409 IQGAP2Q13576 1575 aa25.01■■□□□ 1.59
FANCA-220ENST00000566409 ADCY10Q96PN6 1610 aa24.97■■□□□ 1.59
FANCA-220ENST00000566409 DISP1Q96F81 1524 aa24.91■■□□□ 1.58
FANCA-220ENST00000566409 PTPRGP23470 1445 aa24.91■■□□□ 1.58
FANCA-220ENST00000566409 CARMIL2Q6F5E8 1435 aa24.91■■□□□ 1.58
FANCA-220ENST00000566409 KIF13AQ9H1H9 1805 aa24.91■■□□□ 1.58
FANCA-220ENST00000566409 PRXQ9BXM0 1461 aa24.89■■□□□ 1.58
FANCA-220ENST00000566409 TNIKQ9UKE5 1360 aa24.89■■□□□ 1.57
FANCA-220ENST00000566409 UGGT2Q9NYU1 1516 aa24.88■■□□□ 1.57
FANCA-220ENST00000566409 TTBK1Q5TCY1 1321 aaPredicted RBP24.86■■□□□ 1.57
FANCA-220ENST00000566409 MAPKBP1O60336 1514 aa24.85■■□□□ 1.57
FANCA-220ENST00000566409 CTTNBP2Q8WZ74 1663 aa24.85■■□□□ 1.57
FANCA-220ENST00000566409 NPM1P06748 294 aaKnown RBP eCLIP24.84■■□□□ 1.57
FANCA-220ENST00000566409 KIAA0556O60303 1618 aa24.79■■□□□ 1.56
FANCA-220ENST00000566409 ABCC10Q5T3U5 1492 aa24.79■■□□□ 1.56
FANCA-220ENST00000566409 CSRNP3Q8WYN3 585 aa24.76■■□□□ 1.55
FANCA-220ENST00000566409 DIP2BQ9P265 1576 aa24.76■■□□□ 1.55
FANCA-220ENST00000566409 FAM69CQ0P6D2 419 aa24.75■■□□□ 1.55
FANCA-220ENST00000566409 ABCC2Q92887 1545 aa24.75■■□□□ 1.55
FANCA-220ENST00000566409 UHRF1BP1LA0JNW5 1464 aa24.74■■□□□ 1.55
FANCA-220ENST00000566409 UACAQ9BZF9 1416 aa24.73■■□□□ 1.55
FANCA-220ENST00000566409 EEA1Q15075 1411 aa24.67■■□□□ 1.54
FANCA-220ENST00000566409 GOLGA3Q08378 1498 aa24.65■■□□□ 1.54
FANCA-220ENST00000566409 KDM5BQ9UGL1 1544 aa24.64■■□□□ 1.53
FANCA-220ENST00000566409 ASXL2Q76L83 1435 aa24.63■■□□□ 1.53
FANCA-220ENST00000566409 CHIC1Q5VXU3 224 aa24.62■■□□□ 1.53
FANCA-220ENST00000566409 FAM9AQ8IZU1 332 aaPredicted RBP24.62■■□□□ 1.53
FANCA-220ENST00000566409 PLB1Q6P1J6 1458 aa24.61■■□□□ 1.53
FANCA-220ENST00000566409 ZCCHC11Q5TAX3 1644 aaKnown RBP24.6■■□□□ 1.53
FANCA-220ENST00000566409 TSPOAP1O95153 1857 aa24.6■■□□□ 1.53
FANCA-220ENST00000566409 ABCA8O94911 1581 aa24.56■■□□□ 1.52
FANCA-220ENST00000566409 GLI2P10070 1586 aa24.54■■□□□ 1.52
FANCA-220ENST00000566409 P3H3Q8IVL6 736 aa24.53■■□□□ 1.52
FANCA-220ENST00000566409 SAMD9Q5K651 1589 aa24.52■■□□□ 1.52
FANCA-220ENST00000566409 EPRSP07814 1512 aaKnown RBP24.5■■□□□ 1.51
FANCA-220ENST00000566409 KIF21BO75037 1637 aa24.5■■□□□ 1.51
FANCA-220ENST00000566409 PPRC1Q5VV67 1664 aaKnown RBP24.49■■□□□ 1.51
FANCA-220ENST00000566409 WDR7Q9Y4E6 1490 aa24.43■■□□□ 1.5
FANCA-220ENST00000566409 KDM6BO15054 1643 aa24.43■■□□□ 1.5
FANCA-220ENST00000566409 MAP3K4Q9Y6R4 1608 aa24.43■■□□□ 1.5
FANCA-220ENST00000566409 RANGAP1P46060 587 aaPredicted RBP24.41■■□□□ 1.5
FANCA-220ENST00000566409 ATP10BO94823 1461 aa24.37■■□□□ 1.49
FANCA-220ENST00000566409 ARID3CA6NKF2 412 aa24.35■■□□□ 1.49
FANCA-220ENST00000566409 FHOD3Q2V2M9 1422 aa24.35■■□□□ 1.49
FANCA-220ENST00000566409 EHMT2Q96KQ7 1210 aa24.34■■□□□ 1.49
FANCA-220ENST00000566409 RAPGEF6Q8TEU7 1601 aa24.34■■□□□ 1.49
FANCA-220ENST00000566409 KCNH8Q96L42 1107 aa24.32■■□□□ 1.48
FANCA-220ENST00000566409 COL17A1Q9UMD9 1497 aaPredicted RBP24.31■■□□□ 1.48
FANCA-220ENST00000566409 EFCAB5A4FU69 1503 aa24.29■■□□□ 1.48
FANCA-220ENST00000566409 CFAP43Q8NDM7 1665 aa24.27■■□□□ 1.48
FANCA-220ENST00000566409 NUP153P49790 1475 aaKnown RBP24.27■■□□□ 1.48
FANCA-220ENST00000566409 UBTFP17480 764 aaKnown RBP24.27■■□□□ 1.48
FANCA-220ENST00000566409 TEX14Q8IWB6 1497 aa24.26■■□□□ 1.47
FANCA-220ENST00000566409 CD109Q6YHK3 1445 aa24.25■■□□□ 1.47
FANCA-220ENST00000566409 MAGI3Q5TCQ9 1506 aa24.23■■□□□ 1.47
FANCA-220ENST00000566409 AEBP2Q6ZN18 517 aaPredicted RBP24.22■■□□□ 1.47
FANCA-220ENST00000566409 ARHGAP35Q9NRY4 1499 aa24.17■■□□□ 1.46
FANCA-220ENST00000566409 ABCA9Q8IUA7 1624 aa24.17■■□□□ 1.46
FANCA-220ENST00000566409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.16■■□□□ 1.46
FANCA-220ENST00000566409 HNRNPUL2Q1KMD3 747 aaKnown RBP24.16■■□□□ 1.46
FANCA-220ENST00000566409 KDM4FA0A1W2PPD8 638 aa24.11■■□□□ 1.45
FANCA-220ENST00000566409 CDK13Q14004 1512 aaKnown RBP24.06■■□□□ 1.44
FANCA-220ENST00000566409 PLEKHD1A6NEE1 506 aa24.06■■□□□ 1.44
FANCA-220ENST00000566409 FMN1Q68DA7 1419 aa24.05■■□□□ 1.44
FANCA-220ENST00000566409 ARAP3Q8WWN8 1544 aa24.04■■□□□ 1.44
FANCA-220ENST00000566409 HECW1Q76N89 1606 aa24■■□□□ 1.43
FANCA-220ENST00000566409 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24■■□□□ 1.43
FANCA-220ENST00000566409 ATP1B4Q9UN42 357 aaPredicted RBP23.98■■□□□ 1.43
FANCA-220ENST00000566409 LRRIQ1Q96JM4 1722 aa23.98■■□□□ 1.43
FANCA-220ENST00000566409 PHLDB1Q86UU1 1377 aa23.97■■□□□ 1.43
FANCA-220ENST00000566409 NEO1Q92859 1461 aa23.97■■□□□ 1.43
FANCA-220ENST00000566409 TTC37Q6PGP7 1564 aa23.96■■□□□ 1.43
FANCA-220ENST00000566409 ADGRL1O94910 1474 aa23.94■■□□□ 1.42
FANCA-220ENST00000566409 RAPGEF3O95398 923 aa23.92■■□□□ 1.42
FANCA-220ENST00000566409 FRMPD1Q5SYB0 1578 aa23.89■■□□□ 1.41
FANCA-220ENST00000566409 PCF11O94913 1555 aaKnown RBP23.88■■□□□ 1.41
FANCA-220ENST00000566409 CASKIN1Q8WXD9 1431 aa23.87■■□□□ 1.41
FANCA-220ENST00000566409 FANCAO15360 1455 aa23.87■■□□□ 1.41
FANCA-220ENST00000566409 CLIP1P30622 1438 aa23.86■■□□□ 1.41
FANCA-220ENST00000566409 AKNAQ7Z591 1439 aa23.86■■□□□ 1.41
FANCA-220ENST00000566409 KIF14Q15058 1648 aa23.86■■□□□ 1.41
FANCA-220ENST00000566409 CDK11AQ9UQ88 783 aaPredicted RBP23.84■■□□□ 1.41
FANCA-220ENST00000566409 RICTORQ6R327 1708 aa23.83■■□□□ 1.41
FANCA-220ENST00000566409 PLCH2O75038 1416 aa23.83■■□□□ 1.4
FANCA-220ENST00000566409 TROQ12816 1431 aaPredicted RBP23.83■■□□□ 1.4
FANCA-220ENST00000566409 CFAP74Q9C0B2 1584 aa23.82■■□□□ 1.4
FANCA-220ENST00000566409 DENND4BO75064 1496 aaPredicted RBP23.8■■□□□ 1.4
FANCA-220ENST00000566409 MYO5CQ9NQX4 1742 aa23.79■■□□□ 1.4
FANCA-220ENST00000566409 CCDC18Q5T9S5 1454 aa23.76■■□□□ 1.39
FANCA-220ENST00000566409 FYCO1Q9BQS8 1478 aa23.76■■□□□ 1.39
FANCA-220ENST00000566409 ZMYM4Q5VZL5 1548 aa23.71■■□□□ 1.39
FANCA-220ENST00000566409 SCAPERQ9BY12 1400 aa23.71■■□□□ 1.39
FANCA-220ENST00000566409 CDC42BPBQ9Y5S2 1711 aa23.7■■□□□ 1.39
FANCA-220ENST00000566409 EFCAB2Q5VUJ9 269 aa23.7■■□□□ 1.38
FANCA-220ENST00000566409 ARHGEF40Q8TER5 1519 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms