RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 NISCHQ9Y2I1 1504 aa36.36■■■■□ 3.41
FANCA-220ENST00000566409 CCDC180Q9P1Z9 1646 aa32.45■■■□□ 2.79
FANCA-220ENST00000566409 ABCC9O60706 1549 aa32.14■■■□□ 2.74
FANCA-220ENST00000566409 RB1CC1Q8TDY2 1594 aa30.71■■■□□ 2.51
FANCA-220ENST00000566409 NACADO15069 1562 aa30.58■■■□□ 2.49
FANCA-220ENST00000566409 DCAF8L2P0C7V8 631 aa30.5■■■□□ 2.47
FANCA-220ENST00000566409 MYO15BQ96JP2 1530 aa30.28■■■□□ 2.44
FANCA-220ENST00000566409 ZCCHC6Q5VYS8 1495 aaKnown RBP30.19■■■□□ 2.42
FANCA-220ENST00000566409 UNC13AQ9UPW8 1703 aa30.12■■■□□ 2.41
FANCA-220ENST00000566409 DCAF1Q9Y4B6 1507 aa30.03■■■□□ 2.4
FANCA-220ENST00000566409 PABPN1Q86U42 306 aaKnown RBP eCLIP29.99■■■□□ 2.39
FANCA-220ENST00000566409 DNAJC5BQ9UF47 199 aa29.92■■■□□ 2.38
FANCA-220ENST00000566409 BICRAQ9NZM4 1560 aa29.89■■■□□ 2.38
FANCA-220ENST00000566409 SCRIBQ14160 1630 aa29.61■■■□□ 2.33
FANCA-220ENST00000566409 SHROOM4Q9ULL8 1493 aa29.4■■■□□ 2.3
FANCA-220ENST00000566409 EIF4G1Q04637 1599 aaKnown RBP29.07■■■□□ 2.24
FANCA-220ENST00000566409 CC2D2AQ9P2K1 1620 aa29.05■■■□□ 2.24
FANCA-220ENST00000566409 CECR2Q9BXF3 1484 aa28.9■■■□□ 2.22
FANCA-220ENST00000566409 SMARCA4P51532 1647 aa28.29■■■□□ 2.12
FANCA-220ENST00000566409 NCAPD3P42695 1498 aa28.26■■■□□ 2.11
FANCA-220ENST00000566409 ATAD2BQ9ULI0 1458 aa28.22■■■□□ 2.11
FANCA-220ENST00000566409 BAZ1AQ9NRL2 1556 aaPredicted RBP28.16■■■□□ 2.1
FANCA-220ENST00000566409 SMARCA2P51531 1590 aa28.12■■■□□ 2.09
FANCA-220ENST00000566409 HMGXB3Q12766 1538 aa28.06■■■□□ 2.08
FANCA-220ENST00000566409 MROH2BQ7Z745 1585 aa28.04■■■□□ 2.08
FANCA-220ENST00000566409 PEG3Q9GZU2 1588 aa28.02■■■□□ 2.08
FANCA-220ENST00000566409 BAZ1BQ9UIG0 1483 aaKnown RBP27.94■■■□□ 2.06
FANCA-220ENST00000566409 NESP48681 1621 aa27.74■■■□□ 2.03
FANCA-220ENST00000566409 WIZO95785 1651 aa27.73■■■□□ 2.03
FANCA-220ENST00000566409 ERCC6Q03468 1493 aa27.66■■■□□ 2.02
FANCA-220ENST00000566409 RSF1Q96T23 1441 aaPredicted RBP27.58■■■□□ 2
FANCA-220ENST00000566409 LAMC3Q9Y6N6 1575 aa27.54■■■□□ 2
FANCA-220ENST00000566409 CUX2O14529 1486 aa27.51■■□□□ 1.99
FANCA-220ENST00000566409 CADPSQ9ULU8 1353 aa27.4■■□□□ 1.98
FANCA-220ENST00000566409 KIF21AQ7Z4S6 1674 aa27.4■■□□□ 1.98
FANCA-220ENST00000566409 THOC2Q8NI27 1593 aaKnown RBP27.37■■□□□ 1.97
FANCA-220ENST00000566409 TOP2AP11388 1531 aaKnown RBP27.36■■□□□ 1.97
FANCA-220ENST00000566409 PDS5BQ9NTI5 1447 aa27.34■■□□□ 1.97
FANCA-220ENST00000566409 CFTRP13569 1480 aa27.18■■□□□ 1.94
FANCA-220ENST00000566409 DNAJC5Q9H3Z4 198 aa27.15■■□□□ 1.94
FANCA-220ENST00000566409 MRC2Q9UBG0 1479 aa27.11■■□□□ 1.93
FANCA-220ENST00000566409 CCDC88BA6NC98 1476 aa27.08■■□□□ 1.93
FANCA-220ENST00000566409 FANCD2Q9BXW9 1451 aa27.08■■□□□ 1.93
FANCA-220ENST00000566409 CEP164Q9UPV0 1460 aa27.06■■□□□ 1.92
FANCA-220ENST00000566409 WDR62O43379 1518 aa27.06■■□□□ 1.92
FANCA-220ENST00000566409 PRDM2Q13029 1718 aa26.95■■□□□ 1.9
FANCA-220ENST00000566409 URB2Q14146 1524 aaKnown RBP26.88■■□□□ 1.89
FANCA-220ENST00000566409 TOPBP1Q92547 1522 aa26.63■■□□□ 1.85
FANCA-220ENST00000566409 SUPT5HO00267 1087 aaKnown RBP26.58■■□□□ 1.85
FANCA-220ENST00000566409 DNMBPQ6XZF7 1577 aa26.55■■□□□ 1.84
FANCA-220ENST00000566409 ABCC8Q09428 1581 aa26.54■■□□□ 1.84
FANCA-220ENST00000566409 IFT140Q96RY7 1462 aa26.51■■□□□ 1.83
FANCA-220ENST00000566409 ZNF608Q9ULD9 1512 aaPredicted RBP26.49■■□□□ 1.83
FANCA-220ENST00000566409 TARBP1Q13395 1621 aaKnown RBP26.39■■□□□ 1.82
FANCA-220ENST00000566409 POLA1P09884 1462 aaPredicted RBP26.38■■□□□ 1.81
FANCA-220ENST00000566409 EIF4G3O43432 1585 aaKnown RBP26.34■■□□□ 1.81
FANCA-220ENST00000566409 OSCARQ8IYS5 282 aa26.32■■□□□ 1.8
FANCA-220ENST00000566409 CUX1P39880 1505 aa26.32■■□□□ 1.8
FANCA-220ENST00000566409 AQRO60306 1485 aaKnown RBP eCLIP26.3■■□□□ 1.82e-9■■■□□ 18.8
FANCA-220ENST00000566409 RAD54L2Q9Y4B4 1467 aa26.3■■□□□ 1.8
FANCA-220ENST00000566409 FGD5Q6ZNL6 1462 aa26.26■■□□□ 1.79
FANCA-220ENST00000566409 SOGA1O94964 1423 aa26.25■■□□□ 1.79
FANCA-220ENST00000566409 TDRD9Q8NDG6 1382 aaKnown RBP26.18■■□□□ 1.78
FANCA-220ENST00000566409 CHD1O14646 1710 aa26.11■■□□□ 1.77
FANCA-220ENST00000566409 WDR97A6NE52 1622 aa26.09■■□□□ 1.77
FANCA-220ENST00000566409 TRIM41Q8WV44 630 aa26.07■■□□□ 1.76
FANCA-220ENST00000566409 SNAPC4Q5SXM2 1469 aa26■■□□□ 1.75
FANCA-220ENST00000566409 FBLN2P98095 1184 aa25.99■■□□□ 1.75
FANCA-220ENST00000566409 RIMBP3CA6NJZ7 1639 aa25.98■■□□□ 1.75
FANCA-220ENST00000566409 RIMBP3BA6NNM3 1639 aa25.98■■□□□ 1.75
FANCA-220ENST00000566409 RIMBP3Q9UFD9 1639 aa25.98■■□□□ 1.75
FANCA-220ENST00000566409 BIVM-ERCC5R4GMW8 1640 aa25.98■■□□□ 1.75
FANCA-220ENST00000566409 SYNJ1O43426 1573 aa25.98■■□□□ 1.75
FANCA-220ENST00000566409 ABCA10Q8WWZ4 1543 aa25.98■■□□□ 1.75
FANCA-220ENST00000566409 TOP2BQ02880 1626 aa25.97■■□□□ 1.75
FANCA-220ENST00000566409 GRIN2BQ13224 1484 aa25.97■■□□□ 1.75
FANCA-220ENST00000566409 WRNQ14191 1432 aaPredicted RBP eCLIP25.97■■□□□ 1.75
FANCA-220ENST00000566409 GAPVD1Q14C86 1478 aa25.93■■□□□ 1.74
FANCA-220ENST00000566409 MAGI1Q96QZ7 1491 aaPredicted RBP25.93■■□□□ 1.74
FANCA-220ENST00000566409 PBRM1Q86U86 1689 aa25.93■■□□□ 1.74
FANCA-220ENST00000566409 ABCA5Q8WWZ7 1642 aa25.92■■□□□ 1.74
FANCA-220ENST00000566409 ARHGEF11O15085 1522 aa25.92■■□□□ 1.74
FANCA-220ENST00000566409 CHMP7Q8WUX9 453 aaPredicted RBP25.86■■□□□ 1.73
FANCA-220ENST00000566409 SYNJ2O15056 1496 aa25.85■■□□□ 1.73
FANCA-220ENST00000566409 CLASP1Q7Z460 1538 aa25.8■■□□□ 1.72
FANCA-220ENST00000566409 CYB5RLQ6IPT4 315 aa25.7■■□□□ 1.7
FANCA-220ENST00000566409 ARAP1Q96P48 1450 aa25.7■■□□□ 1.7
FANCA-220ENST00000566409 ADAMTS12P58397 1594 aa25.69■■□□□ 1.7
FANCA-220ENST00000566409 GRIN2AQ12879 1464 aa25.66■■□□□ 1.7
FANCA-220ENST00000566409 ERICH3Q5RHP9 1530 aa25.65■■□□□ 1.7
FANCA-220ENST00000566409 FHAD1B1AJZ9 1412 aa25.61■■□□□ 1.69
FANCA-220ENST00000566409 CEP170Q5SW79 1584 aa25.57■■□□□ 1.68
FANCA-220ENST00000566409 NUP160Q12769 1436 aa25.56■■□□□ 1.68
FANCA-220ENST00000566409 ERCC6L2Q5T890 1561 aa25.48■■□□□ 1.67
FANCA-220ENST00000566409 IGF1RP08069 1367 aa25.44■■□□□ 1.66
FANCA-220ENST00000566409 SHROOM2Q13796 1616 aa25.43■■□□□ 1.66
FANCA-220ENST00000566409 KIF27Q86VH2 1401 aa25.43■■□□□ 1.66
FANCA-220ENST00000566409 CUL7Q14999 1698 aa25.33■■□□□ 1.65
FANCA-220ENST00000566409 RUSC2Q8N2Y8 1516 aa25.32■■□□□ 1.64
FANCA-220ENST00000566409 JPH4Q96JJ6 628 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms