RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 PRG4Q92954 1404 aaPredicted RBP34.92■■■■□ 3.18
CLN6-207ENST00000566347 JPH4Q96JJ6 628 aa34.92■■■■□ 3.18
CLN6-207ENST00000566347 KIAA0586Q9BVV6 1533 aa34.81■■■■□ 3.16
CLN6-207ENST00000566347 CARMIL1Q5VZK9 1371 aa34.77■■■■□ 3.16
CLN6-207ENST00000566347 IQGAP2Q13576 1575 aa34.51■■■■□ 3.12
CLN6-207ENST00000566347 RAPGEF2Q9Y4G8 1499 aa34.51■■■■□ 3.11
CLN6-207ENST00000566347 NPM1P06748 294 aaKnown RBP eCLIP34.5■■■■□ 3.11
CLN6-207ENST00000566347 ADCY10Q96PN6 1610 aa34.48■■■■□ 3.11
CLN6-207ENST00000566347 CARMIL2Q6F5E8 1435 aa34.47■■■■□ 3.11
CLN6-207ENST00000566347 KIF13AQ9H1H9 1805 aa34.42■■■■□ 3.1
CLN6-207ENST00000566347 MAPKBP1O60336 1514 aa34.42■■■■□ 3.1
CLN6-207ENST00000566347 PTPRGP23470 1445 aa34.42■■■■□ 3.1
CLN6-207ENST00000566347 TNIKQ9UKE5 1360 aa34.39■■■■□ 3.1
CLN6-207ENST00000566347 ABCC10Q5T3U5 1492 aa34.34■■■■□ 3.09
CLN6-207ENST00000566347 UGGT2Q9NYU1 1516 aa34.3■■■■□ 3.08
CLN6-207ENST00000566347 DISP1Q96F81 1524 aa34.3■■■■□ 3.08
CLN6-207ENST00000566347 TTBK1Q5TCY1 1321 aaPredicted RBP34.29■■■■□ 3.08
CLN6-207ENST00000566347 FAM69CQ0P6D2 419 aa34.28■■■■□ 3.08
CLN6-207ENST00000566347 DIP2BQ9P265 1576 aa34.25■■■■□ 3.07
CLN6-207ENST00000566347 CTTNBP2Q8WZ74 1663 aa34.22■■■■□ 3.07
CLN6-207ENST00000566347 ABCC2Q92887 1545 aa34.21■■■■□ 3.07
CLN6-207ENST00000566347 PRXQ9BXM0 1461 aa34.2■■■■□ 3.07
CLN6-207ENST00000566347 UHRF1BP1LA0JNW5 1464 aa34.2■■■■□ 3.06
CLN6-207ENST00000566347 KIAA0556O60303 1618 aa34.19■■■■□ 3.06
CLN6-207ENST00000566347 UACAQ9BZF9 1416 aa34.17■■■■□ 3.06
CLN6-207ENST00000566347 GOLGA3Q08378 1498 aa34.08■■■■□ 3.05
CLN6-207ENST00000566347 PLB1Q6P1J6 1458 aa34.07■■■■□ 3.04
CLN6-207ENST00000566347 ASXL2Q76L83 1435 aa34.05■■■■□ 3.04
CLN6-207ENST00000566347 KDM5BQ9UGL1 1544 aa34.02■■■■□ 3.04
CLN6-207ENST00000566347 CSRNP3Q8WYN3 585 aa34■■■■□ 3.03
CLN6-207ENST00000566347 TSPOAP1O95153 1857 aa33.98■■■■□ 3.03
CLN6-207ENST00000566347 EEA1Q15075 1411 aa33.97■■■■□ 3.03
CLN6-207ENST00000566347 GLI2P10070 1586 aa33.95■■■■□ 3.03
CLN6-207ENST00000566347 ZCCHC11Q5TAX3 1644 aaKnown RBP33.94■■■■□ 3.02
CLN6-207ENST00000566347 KDM6BO15054 1643 aa33.9■■■■□ 3.02
CLN6-207ENST00000566347 AEBP2Q6ZN18 517 aaPredicted RBP33.89■■■■□ 3.02
CLN6-207ENST00000566347 ABCA8O94911 1581 aa33.85■■■■□ 3.01
CLN6-207ENST00000566347 EPRSP07814 1512 aaKnown RBP33.85■■■■□ 3.01
CLN6-207ENST00000566347 FAM9AQ8IZU1 332 aaPredicted RBP33.81■■■■□ 3
CLN6-207ENST00000566347 PPRC1Q5VV67 1664 aaKnown RBP33.79■■■■□ 3
CLN6-207ENST00000566347 WDR7Q9Y4E6 1490 aa33.78■■■■□ 3
CLN6-207ENST00000566347 MAP3K4Q9Y6R4 1608 aa33.76■■■■□ 3
CLN6-207ENST00000566347 SAMD9Q5K651 1589 aa33.73■■■□□ 2.99
CLN6-207ENST00000566347 P3H3Q8IVL6 736 aa33.71■■■□□ 2.99
CLN6-207ENST00000566347 TEX14Q8IWB6 1497 aa33.69■■■□□ 2.98
CLN6-207ENST00000566347 KIF21BO75037 1637 aa33.65■■■□□ 2.98
CLN6-207ENST00000566347 CHIC1Q5VXU3 224 aa33.58■■■□□ 2.97
CLN6-207ENST00000566347 CFAP43Q8NDM7 1665 aa33.58■■■□□ 2.97
CLN6-207ENST00000566347 KCNH8Q96L42 1107 aa33.57■■■□□ 2.96
CLN6-207ENST00000566347 ATP10BO94823 1461 aa33.56■■■□□ 2.96
CLN6-207ENST00000566347 RAPGEF6Q8TEU7 1601 aa33.55■■■□□ 2.96
CLN6-207ENST00000566347 CD109Q6YHK3 1445 aa33.54■■■□□ 2.96
CLN6-207ENST00000566347 RANGAP1P46060 587 aaPredicted RBP33.52■■■□□ 2.96
CLN6-207ENST00000566347 MAGI3Q5TCQ9 1506 aa33.52■■■□□ 2.96
CLN6-207ENST00000566347 ARID3CA6NKF2 412 aa33.51■■■□□ 2.95
CLN6-207ENST00000566347 COL17A1Q9UMD9 1497 aaPredicted RBP33.5■■■□□ 2.95
CLN6-207ENST00000566347 EFCAB5A4FU69 1503 aa33.48■■■□□ 2.95
CLN6-207ENST00000566347 FHOD3Q2V2M9 1422 aa33.48■■■□□ 2.95
CLN6-207ENST00000566347 NUP153P49790 1475 aaKnown RBP33.41■■■□□ 2.94
CLN6-207ENST00000566347 KDM4FA0A1W2PPD8 638 aa33.38■■■□□ 2.93
CLN6-207ENST00000566347 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.38■■■□□ 2.93
CLN6-207ENST00000566347 HNRNPUL2Q1KMD3 747 aaKnown RBP33.38■■■□□ 2.93
CLN6-207ENST00000566347 UBTFP17480 764 aaKnown RBP33.36■■■□□ 2.93
CLN6-207ENST00000566347 ABCA9Q8IUA7 1624 aa33.35■■■□□ 2.93
CLN6-207ENST00000566347 EHMT2Q96KQ7 1210 aa33.29■■■□□ 2.92
CLN6-207ENST00000566347 PHLDB1Q86UU1 1377 aa33.25■■■□□ 2.91
CLN6-207ENST00000566347 ARAP3Q8WWN8 1544 aa33.25■■■□□ 2.91
CLN6-207ENST00000566347 PLEKHD1A6NEE1 506 aa33.23■■■□□ 2.91
CLN6-207ENST00000566347 ADGRL1O94910 1474 aa33.22■■■□□ 2.91
CLN6-207ENST00000566347 FMN1Q68DA7 1419 aa33.19■■■□□ 2.9
CLN6-207ENST00000566347 NEO1Q92859 1461 aa33.18■■■□□ 2.9
CLN6-207ENST00000566347 ARHGAP35Q9NRY4 1499 aa33.17■■■□□ 2.9
CLN6-207ENST00000566347 HECW1Q76N89 1606 aa33.1■■■□□ 2.89
CLN6-207ENST00000566347 CDK13Q14004 1512 aaKnown RBP33.09■■■□□ 2.89
CLN6-207ENST00000566347 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.06■■■□□ 2.882e-6■■■■□ 19.9
CLN6-207ENST00000566347 ATP1B4Q9UN42 357 aaPredicted RBP33.03■■■□□ 2.88
CLN6-207ENST00000566347 CFAP74Q9C0B2 1584 aa33.01■■■□□ 2.88
CLN6-207ENST00000566347 RAPGEF3O95398 923 aa33.01■■■□□ 2.87
CLN6-207ENST00000566347 TTC37Q6PGP7 1564 aa33■■■□□ 2.87
CLN6-207ENST00000566347 FANCAO15360 1455 aa32.98■■■□□ 2.87
CLN6-207ENST00000566347 CDK11AQ9UQ88 783 aaPredicted RBP32.97■■■□□ 2.87
CLN6-207ENST00000566347 FRMPD1Q5SYB0 1578 aa32.96■■■□□ 2.87
CLN6-207ENST00000566347 AKNAQ7Z591 1439 aa32.95■■■□□ 2.87
CLN6-207ENST00000566347 DENND4BO75064 1496 aaPredicted RBP32.93■■■□□ 2.86
CLN6-207ENST00000566347 RICTORQ6R327 1708 aa32.88■■■□□ 2.85
CLN6-207ENST00000566347 PLCH2O75038 1416 aa32.87■■■□□ 2.85
CLN6-207ENST00000566347 TROQ12816 1431 aaPredicted RBP32.85■■■□□ 2.85
CLN6-207ENST00000566347 KIF14Q15058 1648 aa32.84■■■□□ 2.85
CLN6-207ENST00000566347 LRRIQ1Q96JM4 1722 aa32.83■■■□□ 2.85
CLN6-207ENST00000566347 CLIP1P30622 1438 aa32.83■■■□□ 2.85
CLN6-207ENST00000566347 CASKIN1Q8WXD9 1431 aa32.83■■■□□ 2.85
CLN6-207ENST00000566347 MYO5CQ9NQX4 1742 aa32.82■■■□□ 2.84
CLN6-207ENST00000566347 ARHGEF40Q8TER5 1519 aa32.81■■■□□ 2.84
CLN6-207ENST00000566347 PCF11O94913 1555 aaKnown RBP32.8■■■□□ 2.84
CLN6-207ENST00000566347 CCDC18Q5T9S5 1454 aa32.8■■■□□ 2.84
CLN6-207ENST00000566347 ZMYM4Q5VZL5 1548 aa32.78■■■□□ 2.84
CLN6-207ENST00000566347 EFCAB2Q5VUJ9 269 aa32.76■■■□□ 2.83
CLN6-207ENST00000566347 ADAMTSL3P82987 1691 aa32.74■■■□□ 2.83
CLN6-207ENST00000566347 SCAPERQ9BY12 1400 aa32.74■■■□□ 2.83
CLN6-207ENST00000566347 ARID4BQ4LE39 1312 aaPredicted RBP32.73■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms