RNA–Protein interactions for RNA: ENST00000565931.1

RNF40-207, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-207ENST00000565931 JPH4Q96JJ6 628 aa27.33■■□□□ 1.97
RNF40-207ENST00000565931 EHMT2Q96KQ7 1210 aa27.31■■□□□ 1.96
RNF40-207ENST00000565931 GOLGA3Q08378 1498 aa27.3■■□□□ 1.96
RNF40-207ENST00000565931 UBTFP17480 764 aaKnown RBP27.24■■□□□ 1.95
RNF40-207ENST00000565931 IQGAP2Q13576 1575 aa27.22■■□□□ 1.95
RNF40-207ENST00000565931 SHROOM2Q13796 1616 aa27.21■■□□□ 1.95
RNF40-207ENST00000565931 PRG4Q92954 1404 aaPredicted RBP27.2■■□□□ 1.94
RNF40-207ENST00000565931 ARHGEF11O15085 1522 aa27.2■■□□□ 1.94
RNF40-207ENST00000565931 UGGT2Q9NYU1 1516 aa27.14■■□□□ 1.94
RNF40-207ENST00000565931 CTTNBP2Q8WZ74 1663 aa27.14■■□□□ 1.93
RNF40-207ENST00000565931 ERCC6L2Q5T890 1561 aa27.13■■□□□ 1.93
RNF40-207ENST00000565931 RIMBP3CA6NJZ7 1639 aa27.11■■□□□ 1.93
RNF40-207ENST00000565931 RIMBP3BA6NNM3 1639 aa27.11■■□□□ 1.93
RNF40-207ENST00000565931 RIMBP3Q9UFD9 1639 aa27.11■■□□□ 1.93
RNF40-207ENST00000565931 LOC105371045A0A1W2PR82 267 aa27.1■■□□□ 1.93
RNF40-207ENST00000565931 CARMIL2Q6F5E8 1435 aa27.07■■□□□ 1.92
RNF40-207ENST00000565931 TNIKQ9UKE5 1360 aa27.07■■□□□ 1.92
RNF40-207ENST00000565931 DISP1Q96F81 1524 aa27.06■■□□□ 1.92
RNF40-207ENST00000565931 RANGAP1P46060 587 aaPredicted RBP27.04■■□□□ 1.92
RNF40-207ENST00000565931 ARAP1Q96P48 1450 aa27.03■■□□□ 1.92
RNF40-207ENST00000565931 CYB5RLQ6IPT4 315 aa27■■□□□ 1.91
RNF40-207ENST00000565931 P3H3Q8IVL6 736 aa26.96■■□□□ 1.91
RNF40-207ENST00000565931 KIAA0556O60303 1618 aa26.96■■□□□ 1.91
RNF40-207ENST00000565931 PTPRGP23470 1445 aa26.94■■□□□ 1.9
RNF40-207ENST00000565931 SAMD9Q5K651 1589 aa26.92■■□□□ 1.9
RNF40-207ENST00000565931 TTBK1Q5TCY1 1321 aaPredicted RBP26.9■■□□□ 1.9
RNF40-207ENST00000565931 EFCAB5A4FU69 1503 aa26.88■■□□□ 1.89
RNF40-207ENST00000565931 ARHGAP35Q9NRY4 1499 aa26.87■■□□□ 1.89
RNF40-207ENST00000565931 FHOD3Q2V2M9 1422 aa26.85■■□□□ 1.89
RNF40-207ENST00000565931 CLIP1P30622 1438 aa26.84■■□□□ 1.89
RNF40-207ENST00000565931 CEP162Q5TB80 1403 aa26.81■■□□□ 1.88
RNF40-207ENST00000565931 UACAQ9BZF9 1416 aa26.76■■□□□ 1.87
RNF40-207ENST00000565931 PLB1Q6P1J6 1458 aa26.72■■□□□ 1.87
RNF40-207ENST00000565931 UHRF1BP1LA0JNW5 1464 aa26.7■■□□□ 1.87
RNF40-207ENST00000565931 ABCA8O94911 1581 aa26.68■■□□□ 1.86
RNF40-207ENST00000565931 FMN1Q68DA7 1419 aa26.67■■□□□ 1.86
RNF40-207ENST00000565931 ABCC2Q92887 1545 aa26.66■■□□□ 1.86
RNF40-207ENST00000565931 ADCY10Q96PN6 1610 aa26.65■■□□□ 1.86
RNF40-207ENST00000565931 NPM1P06748 294 aaKnown RBP eCLIP26.62■■□□□ 1.85
RNF40-207ENST00000565931 KDM5BQ9UGL1 1544 aa26.57■■□□□ 1.84
RNF40-207ENST00000565931 RAPGEF6Q8TEU7 1601 aa26.57■■□□□ 1.84
RNF40-207ENST00000565931 NUP153P49790 1475 aaKnown RBP26.55■■□□□ 1.84
RNF40-207ENST00000565931 ARID3CA6NKF2 412 aa26.53■■□□□ 1.84
RNF40-207ENST00000565931 CASKIN1Q8WXD9 1431 aa26.52■■□□□ 1.84
RNF40-207ENST00000565931 ATP1B4Q9UN42 357 aaPredicted RBP26.52■■□□□ 1.84
RNF40-207ENST00000565931 ATP10BO94823 1461 aa26.51■■□□□ 1.83
RNF40-207ENST00000565931 VPS8Q8N3P4 1428 aa26.47■■□□□ 1.83
RNF40-207ENST00000565931 PCF11O94913 1555 aaKnown RBP26.45■■□□□ 1.82
RNF40-207ENST00000565931 MAPKBP1O60336 1514 aa26.44■■□□□ 1.82
RNF40-207ENST00000565931 ZCCHC11Q5TAX3 1644 aaKnown RBP26.43■■□□□ 1.82
RNF40-207ENST00000565931 FYCO1Q9BQS8 1478 aa26.43■■□□□ 1.82
RNF40-207ENST00000565931 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.43■■□□□ 1.82
RNF40-207ENST00000565931 HNRNPUL2Q1KMD3 747 aaKnown RBP26.43■■□□□ 1.82
RNF40-207ENST00000565931 HECW1Q76N89 1606 aa26.43■■□□□ 1.82
RNF40-207ENST00000565931 ASXL2Q76L83 1435 aa26.42■■□□□ 1.82
RNF40-207ENST00000565931 EPRSP07814 1512 aaKnown RBP26.41■■□□□ 1.82
RNF40-207ENST00000565931 CDK13Q14004 1512 aaKnown RBP26.37■■□□□ 1.81
RNF40-207ENST00000565931 PLEKHD1A6NEE1 506 aa26.34■■□□□ 1.81
RNF40-207ENST00000565931 CCDC18Q5T9S5 1454 aa26.33■■□□□ 1.81
RNF40-207ENST00000565931 WDR7Q9Y4E6 1490 aa26.32■■□□□ 1.8
RNF40-207ENST00000565931 CDK11AQ9UQ88 783 aaPredicted RBP26.31■■□□□ 1.8
RNF40-207ENST00000565931 ABCC10Q5T3U5 1492 aa26.3■■□□□ 1.8
RNF40-207ENST00000565931 TRHP20396 242 aaPredicted RBP26.3■■□□□ 1.8
RNF40-207ENST00000565931 KCNH8Q96L42 1107 aa26.28■■□□□ 1.8
RNF40-207ENST00000565931 FAM69CQ0P6D2 419 aa26.27■■□□□ 1.8
RNF40-207ENST00000565931 LRRIQ1Q96JM4 1722 aa26.25■■□□□ 1.79
RNF40-207ENST00000565931 TROQ12816 1431 aaPredicted RBP26.22■■□□□ 1.79
RNF40-207ENST00000565931 DIP2BQ9P265 1576 aa26.21■■□□□ 1.79
RNF40-207ENST00000565931 GLI2P10070 1586 aa26.17■■□□□ 1.78
RNF40-207ENST00000565931 APLP2Q06481 763 aa26.17■■□□□ 1.78
RNF40-207ENST00000565931 MAP3K1Q13233 1512 aa26.17■■□□□ 1.78
RNF40-207ENST00000565931 MAGI3Q5TCQ9 1506 aa26.17■■□□□ 1.78
RNF40-207ENST00000565931 TIAM1Q13009 1591 aa26.15■■□□□ 1.78
RNF40-207ENST00000565931 MTUS2Q5JR59 1369 aa26.14■■□□□ 1.78
RNF40-207ENST00000565931 KANK4Q5T7N3 995 aaPredicted RBP26.11■■□□□ 1.77
RNF40-207ENST00000565931 CFAP43Q8NDM7 1665 aa26.09■■□□□ 1.77
RNF40-207ENST00000565931 KIF13AQ9H1H9 1805 aa26.08■■□□□ 1.77
RNF40-207ENST00000565931 CD109Q6YHK3 1445 aa26.07■■□□□ 1.76
RNF40-207ENST00000565931 LRRC9Q6ZRR7 1453 aa26.07■■□□□ 1.76
RNF40-207ENST00000565931 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.06■■□□□ 1.76
RNF40-207ENST00000565931 EHBP1L1Q8N3D4 1523 aa26.05■■□□□ 1.76
RNF40-207ENST00000565931 ABCA9Q8IUA7 1624 aa26.04■■□□□ 1.76
RNF40-207ENST00000565931 KIF14Q15058 1648 aa26.03■■□□□ 1.76
RNF40-207ENST00000565931 MAP3K4Q9Y6R4 1608 aa26.02■■□□□ 1.76
RNF40-207ENST00000565931 TTC37Q6PGP7 1564 aa25.99■■□□□ 1.75
RNF40-207ENST00000565931 PLCH2O75038 1416 aa25.96■■□□□ 1.75
RNF40-207ENST00000565931 NCOA2Q15596 1464 aa25.94■■□□□ 1.74
RNF40-207ENST00000565931 TEX14Q8IWB6 1497 aa25.92■■□□□ 1.74
RNF40-207ENST00000565931 CCNB3Q8WWL7 1395 aa25.92■■□□□ 1.74
RNF40-207ENST00000565931 GPATCH8Q9UKJ3 1502 aaKnown RBP25.91■■□□□ 1.74
RNF40-207ENST00000565931 PPRC1Q5VV67 1664 aaKnown RBP25.9■■□□□ 1.74
RNF40-207ENST00000565931 EFCAB2Q5VUJ9 269 aa25.89■■□□□ 1.74
RNF40-207ENST00000565931 PPARGC1BQ86YN6 1023 aaKnown RBP25.88■■□□□ 1.73
RNF40-207ENST00000565931 SUPT6HQ7KZ85 1726 aaKnown RBP25.88■■□□□ 1.73
RNF40-207ENST00000565931 ARAP3Q8WWN8 1544 aa25.87■■□□□ 1.73
RNF40-207ENST00000565931 TSPOAP1O95153 1857 aa25.86■■□□□ 1.73
RNF40-207ENST00000565931 FANCAO15360 1455 aa25.85■■□□□ 1.73
RNF40-207ENST00000565931 NEO1Q92859 1461 aa25.85■■□□□ 1.73
RNF40-207ENST00000565931 PHLDB1Q86UU1 1377 aa25.84■■□□□ 1.73
RNF40-207ENST00000565931 CFDP1Q9UEE9 299 aaPredicted RBP25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms