RNA–Protein interactions for RNA: ENST00000565931.1

RNF40-207, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-207ENST00000565931 NISCHQ9Y2I1 1504 aa39.68■■■■□ 3.94
RNF40-207ENST00000565931 CCDC180Q9P1Z9 1646 aa34.98■■■■□ 3.19
RNF40-207ENST00000565931 ABCC9O60706 1549 aa33.97■■■■□ 3.03
RNF40-207ENST00000565931 ZCCHC6Q5VYS8 1495 aaKnown RBP33.13■■■□□ 2.89
RNF40-207ENST00000565931 DCAF8L2P0C7V8 631 aa33.06■■■□□ 2.88
RNF40-207ENST00000565931 NACADO15069 1562 aa32.87■■■□□ 2.85
RNF40-207ENST00000565931 DCAF1Q9Y4B6 1507 aa32.84■■■□□ 2.85
RNF40-207ENST00000565931 MYO15BQ96JP2 1530 aa32.83■■■□□ 2.85
RNF40-207ENST00000565931 RB1CC1Q8TDY2 1594 aa32.79■■■□□ 2.84
RNF40-207ENST00000565931 SCRIBQ14160 1630 aa32■■■□□ 2.71
RNF40-207ENST00000565931 UNC13AQ9UPW8 1703 aa31.91■■■□□ 2.7
RNF40-207ENST00000565931 PABPN1Q86U42 306 aaKnown RBP eCLIP31.88■■■□□ 2.69
RNF40-207ENST00000565931 BICRAQ9NZM4 1560 aa31.81■■■□□ 2.68
RNF40-207ENST00000565931 SHROOM4Q9ULL8 1493 aa31.64■■■□□ 2.66
RNF40-207ENST00000565931 EIF4G1Q04637 1599 aaKnown RBP30.93■■■□□ 2.54
RNF40-207ENST00000565931 CECR2Q9BXF3 1484 aa30.91■■■□□ 2.54
RNF40-207ENST00000565931 DNAJC5BQ9UF47 199 aa30.9■■■□□ 2.54
RNF40-207ENST00000565931 BAZ1AQ9NRL2 1556 aaPredicted RBP30.7■■■□□ 2.5
RNF40-207ENST00000565931 CC2D2AQ9P2K1 1620 aa30.69■■■□□ 2.5
RNF40-207ENST00000565931 SMARCA4P51532 1647 aa30.65■■■□□ 2.5
RNF40-207ENST00000565931 MROH2BQ7Z745 1585 aa30.6■■■□□ 2.49
RNF40-207ENST00000565931 ATAD2BQ9ULI0 1458 aa30.46■■■□□ 2.47
RNF40-207ENST00000565931 RSF1Q96T23 1441 aaPredicted RBP30.43■■■□□ 2.46
RNF40-207ENST00000565931 NCAPD3P42695 1498 aa30.39■■■□□ 2.46
RNF40-207ENST00000565931 SMARCA2P51531 1590 aa30.38■■■□□ 2.45
RNF40-207ENST00000565931 PEG3Q9GZU2 1588 aa30.36■■■□□ 2.45
RNF40-207ENST00000565931 WIZO95785 1651 aa30.22■■■□□ 2.43
RNF40-207ENST00000565931 HMGXB3Q12766 1538 aa30.21■■■□□ 2.43
RNF40-207ENST00000565931 BAZ1BQ9UIG0 1483 aaKnown RBP30.19■■■□□ 2.42
RNF40-207ENST00000565931 SUPT5HO00267 1087 aaKnown RBP29.99■■■□□ 2.39
RNF40-207ENST00000565931 TOP2AP11388 1531 aaKnown RBP29.96■■■□□ 2.39
RNF40-207ENST00000565931 CCDC88BA6NC98 1476 aa29.66■■■□□ 2.34
RNF40-207ENST00000565931 CADPSQ9ULU8 1353 aa29.55■■■□□ 2.32
RNF40-207ENST00000565931 NESP48681 1621 aa29.51■■■□□ 2.31
RNF40-207ENST00000565931 LAMC3Q9Y6N6 1575 aa29.44■■■□□ 2.3
RNF40-207ENST00000565931 CFTRP13569 1480 aa29.42■■■□□ 2.3
RNF40-207ENST00000565931 PDS5BQ9NTI5 1447 aa29.3■■■□□ 2.28
RNF40-207ENST00000565931 ERCC6Q03468 1493 aa29.22■■■□□ 2.27
RNF40-207ENST00000565931 FANCD2Q9BXW9 1451 aa29.17■■■□□ 2.26
RNF40-207ENST00000565931 CEP164Q9UPV0 1460 aa29.07■■■□□ 2.24
RNF40-207ENST00000565931 KIF21AQ7Z4S6 1674 aa29.04■■■□□ 2.24
RNF40-207ENST00000565931 PRDM2Q13029 1718 aa29■■■□□ 2.23
RNF40-207ENST00000565931 MRC2Q9UBG0 1479 aa28.95■■■□□ 2.22
RNF40-207ENST00000565931 THOC2Q8NI27 1593 aaKnown RBP28.9■■■□□ 2.22
RNF40-207ENST00000565931 URB2Q14146 1524 aaKnown RBP28.84■■■□□ 2.21
RNF40-207ENST00000565931 WDR62O43379 1518 aa28.82■■■□□ 2.2
RNF40-207ENST00000565931 CUX2O14529 1486 aa28.77■■■□□ 2.2
RNF40-207ENST00000565931 ABCC8Q09428 1581 aa28.75■■■□□ 2.19
RNF40-207ENST00000565931 TOPBP1Q92547 1522 aa28.74■■■□□ 2.19
RNF40-207ENST00000565931 DNMBPQ6XZF7 1577 aa28.7■■■□□ 2.18
RNF40-207ENST00000565931 CUX1P39880 1505 aa28.67■■■□□ 2.18
RNF40-207ENST00000565931 WRNQ14191 1432 aaPredicted RBP eCLIP28.66■■■□□ 2.18
RNF40-207ENST00000565931 POLA1P09884 1462 aaPredicted RBP28.53■■■□□ 2.16
RNF40-207ENST00000565931 SYNJ1O43426 1573 aa28.51■■■□□ 2.15
RNF40-207ENST00000565931 FGD5Q6ZNL6 1462 aa28.51■■■□□ 2.15
RNF40-207ENST00000565931 TOP2BQ02880 1626 aa28.48■■■□□ 2.15
RNF40-207ENST00000565931 IFT140Q96RY7 1462 aa28.46■■■□□ 2.15
RNF40-207ENST00000565931 SOGA1O94964 1423 aa28.45■■■□□ 2.15
RNF40-207ENST00000565931 BIVM-ERCC5R4GMW8 1640 aa28.45■■■□□ 2.14
RNF40-207ENST00000565931 RAD54L2Q9Y4B4 1467 aa28.42■■■□□ 2.14
RNF40-207ENST00000565931 TARBP1Q13395 1621 aaKnown RBP28.35■■■□□ 2.13
RNF40-207ENST00000565931 TRIM41Q8WV44 630 aa28.31■■■□□ 2.12
RNF40-207ENST00000565931 ZNF608Q9ULD9 1512 aaPredicted RBP28.31■■■□□ 2.12
RNF40-207ENST00000565931 CHIC1Q5VXU3 224 aa28.26■■■□□ 2.11
RNF40-207ENST00000565931 ABCA10Q8WWZ4 1543 aa28.26■■■□□ 2.11
RNF40-207ENST00000565931 TDRD9Q8NDG6 1382 aaKnown RBP28.25■■■□□ 2.11
RNF40-207ENST00000565931 AQRO60306 1485 aaKnown RBP eCLIP28.22■■■□□ 2.113e-8■■■■□ 19.7
RNF40-207ENST00000565931 WDR97A6NE52 1622 aa28.14■■■□□ 2.1
RNF40-207ENST00000565931 EIF4G3O43432 1585 aaKnown RBP28.13■■■□□ 2.09
RNF40-207ENST00000565931 GAPVD1Q14C86 1478 aa28.1■■■□□ 2.09
RNF40-207ENST00000565931 ABCA5Q8WWZ7 1642 aa28.05■■■□□ 2.08
RNF40-207ENST00000565931 GRIN2BQ13224 1484 aa28.04■■■□□ 2.08
RNF40-207ENST00000565931 KIF27Q86VH2 1401 aa28.04■■■□□ 2.08
RNF40-207ENST00000565931 SNAPC4Q5SXM2 1469 aa27.94■■■□□ 2.06
RNF40-207ENST00000565931 RUSC2Q8N2Y8 1516 aa27.92■■■□□ 2.06
RNF40-207ENST00000565931 IGF1RP08069 1367 aa27.92■■■□□ 2.06
RNF40-207ENST00000565931 MAGI1Q96QZ7 1491 aaPredicted RBP27.9■■■□□ 2.06
RNF40-207ENST00000565931 ERICH3Q5RHP9 1530 aa27.9■■■□□ 2.06
RNF40-207ENST00000565931 PBRM1Q86U86 1689 aa27.87■■■□□ 2.05
RNF40-207ENST00000565931 FBLN2P98095 1184 aa27.81■■■□□ 2.04
RNF40-207ENST00000565931 CHMP7Q8WUX9 453 aaPredicted RBP27.81■■■□□ 2.04
RNF40-207ENST00000565931 FHAD1B1AJZ9 1412 aa27.81■■■□□ 2.04
RNF40-207ENST00000565931 SYNJ2O15056 1496 aa27.8■■■□□ 2.04
RNF40-207ENST00000565931 EEA1Q15075 1411 aa27.76■■■□□ 2.04
RNF40-207ENST00000565931 ADAMTS12P58397 1594 aa27.76■■■□□ 2.03
RNF40-207ENST00000565931 CARMIL1Q5VZK9 1371 aa27.74■■■□□ 2.03
RNF40-207ENST00000565931 CSRNP3Q8WYN3 585 aa27.73■■■□□ 2.03
RNF40-207ENST00000565931 OSCARQ8IYS5 282 aa27.72■■■□□ 2.03
RNF40-207ENST00000565931 FAM9AQ8IZU1 332 aaPredicted RBP27.72■■■□□ 2.03
RNF40-207ENST00000565931 GRIN2AQ12879 1464 aa27.67■■■□□ 2.02
RNF40-207ENST00000565931 CUL7Q14999 1698 aa27.66■■■□□ 2.02
RNF40-207ENST00000565931 CHD1O14646 1710 aa27.64■■■□□ 2.01
RNF40-207ENST00000565931 PRXQ9BXM0 1461 aa27.61■■■□□ 2.01
RNF40-207ENST00000565931 RAPGEF2Q9Y4G8 1499 aa27.58■■■□□ 2.01
RNF40-207ENST00000565931 NUP160Q12769 1436 aa27.56■■■□□ 2
RNF40-207ENST00000565931 DNAJC5Q9H3Z4 198 aa27.5■■□□□ 1.99
RNF40-207ENST00000565931 CEP170Q5SW79 1584 aa27.48■■□□□ 1.99
RNF40-207ENST00000565931 CLASP1Q7Z460 1538 aa27.45■■□□□ 1.98
RNF40-207ENST00000565931 KIAA0586Q9BVV6 1533 aa27.39■■□□□ 1.98
RNF40-207ENST00000565931 KIF21BO75037 1637 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms