RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 TRHP20396 242 aaPredicted RBP25.25■■□□□ 1.63
KNOP1-203ENST00000565844 NUP160Q12769 1436 aa25.24■■□□□ 1.63
KNOP1-203ENST00000565844 CSRNP3Q8WYN3 585 aa25.21■■□□□ 1.63
KNOP1-203ENST00000565844 SHROOM2Q13796 1616 aa25.16■■□□□ 1.62
KNOP1-203ENST00000565844 CARMIL1Q5VZK9 1371 aa25.15■■□□□ 1.62
KNOP1-203ENST00000565844 PRXQ9BXM0 1461 aa25.13■■□□□ 1.61
KNOP1-203ENST00000565844 KIF21BO75037 1637 aa25.12■■□□□ 1.61
KNOP1-203ENST00000565844 RAPGEF2Q9Y4G8 1499 aa25.1■■□□□ 1.61
KNOP1-203ENST00000565844 PRG4Q92954 1404 aaPredicted RBP25.02■■□□□ 1.6
KNOP1-203ENST00000565844 JPH4Q96JJ6 628 aa24.99■■□□□ 1.59
KNOP1-203ENST00000565844 GOLGA3Q08378 1498 aa24.98■■□□□ 1.59
KNOP1-203ENST00000565844 EHMT2Q96KQ7 1210 aa24.97■■□□□ 1.59
KNOP1-203ENST00000565844 CTTNBP2Q8WZ74 1663 aa24.94■■□□□ 1.58
KNOP1-203ENST00000565844 KIAA0586Q9BVV6 1533 aa24.87■■□□□ 1.57
KNOP1-203ENST00000565844 UBTFP17480 764 aaKnown RBP24.84■■□□□ 1.57
KNOP1-203ENST00000565844 LOC105371045A0A1W2PR82 267 aa24.81■■□□□ 1.56
KNOP1-203ENST00000565844 IQGAP2Q13576 1575 aa24.81■■□□□ 1.56
KNOP1-203ENST00000565844 KIF13AQ9H1H9 1805 aa24.81■■□□□ 1.56
KNOP1-203ENST00000565844 ADCY10Q96PN6 1610 aa24.78■■□□□ 1.56
KNOP1-203ENST00000565844 TTBK1Q5TCY1 1321 aaPredicted RBP24.78■■□□□ 1.56
KNOP1-203ENST00000565844 TNIKQ9UKE5 1360 aa24.73■■□□□ 1.55
KNOP1-203ENST00000565844 UGGT2Q9NYU1 1516 aa24.65■■□□□ 1.54
KNOP1-203ENST00000565844 NPM1P06748 294 aaKnown RBP eCLIP24.65■■□□□ 1.54
KNOP1-203ENST00000565844 RANGAP1P46060 587 aaPredicted RBP24.63■■□□□ 1.53
KNOP1-203ENST00000565844 PTPRGP23470 1445 aa24.62■■□□□ 1.53
KNOP1-203ENST00000565844 CARMIL2Q6F5E8 1435 aa24.62■■□□□ 1.53
KNOP1-203ENST00000565844 MAPKBP1O60336 1514 aa24.6■■□□□ 1.53
KNOP1-203ENST00000565844 TSPOAP1O95153 1857 aa24.59■■□□□ 1.53
KNOP1-203ENST00000565844 SAMD9Q5K651 1589 aa24.58■■□□□ 1.53
KNOP1-203ENST00000565844 DIP2BQ9P265 1576 aa24.58■■□□□ 1.53
KNOP1-203ENST00000565844 DISP1Q96F81 1524 aa24.58■■□□□ 1.53
KNOP1-203ENST00000565844 EFCAB5A4FU69 1503 aa24.58■■□□□ 1.52
KNOP1-203ENST00000565844 CEP162Q5TB80 1403 aa24.57■■□□□ 1.52
KNOP1-203ENST00000565844 FAM69CQ0P6D2 419 aa24.57■■□□□ 1.52
KNOP1-203ENST00000565844 KIAA0556O60303 1618 aa24.57■■□□□ 1.52
KNOP1-203ENST00000565844 ABCC10Q5T3U5 1492 aa24.57■■□□□ 1.52
KNOP1-203ENST00000565844 CLIP1P30622 1438 aa24.54■■□□□ 1.52
KNOP1-203ENST00000565844 ARHGAP35Q9NRY4 1499 aa24.5■■□□□ 1.51
KNOP1-203ENST00000565844 ABCC2Q92887 1545 aa24.47■■□□□ 1.51
KNOP1-203ENST00000565844 P3H3Q8IVL6 736 aa24.45■■□□□ 1.5
KNOP1-203ENST00000565844 UACAQ9BZF9 1416 aa24.44■■□□□ 1.5
KNOP1-203ENST00000565844 FHOD3Q2V2M9 1422 aa24.43■■□□□ 1.5
KNOP1-203ENST00000565844 UHRF1BP1LA0JNW5 1464 aa24.41■■□□□ 1.5
KNOP1-203ENST00000565844 ZCCHC11Q5TAX3 1644 aaKnown RBP24.4■■□□□ 1.5
KNOP1-203ENST00000565844 ASXL2Q76L83 1435 aa24.4■■□□□ 1.5
KNOP1-203ENST00000565844 KDM6BO15054 1643 aa24.34■■□□□ 1.49
KNOP1-203ENST00000565844 PLB1Q6P1J6 1458 aa24.34■■□□□ 1.49
KNOP1-203ENST00000565844 PPRC1Q5VV67 1664 aaKnown RBP24.32■■□□□ 1.48
KNOP1-203ENST00000565844 KDM5BQ9UGL1 1544 aa24.32■■□□□ 1.48
KNOP1-203ENST00000565844 AEBP2Q6ZN18 517 aaPredicted RBP24.31■■□□□ 1.48
KNOP1-203ENST00000565844 FMN1Q68DA7 1419 aa24.3■■□□□ 1.48
KNOP1-203ENST00000565844 ABCA8O94911 1581 aa24.26■■□□□ 1.47
KNOP1-203ENST00000565844 GLI2P10070 1586 aa24.26■■□□□ 1.47
KNOP1-203ENST00000565844 RAPGEF6Q8TEU7 1601 aa24.26■■□□□ 1.47
KNOP1-203ENST00000565844 PCF11O94913 1555 aaKnown RBP24.25■■□□□ 1.47
KNOP1-203ENST00000565844 EPRSP07814 1512 aaKnown RBP24.24■■□□□ 1.47
KNOP1-203ENST00000565844 VPS8Q8N3P4 1428 aa24.23■■□□□ 1.47
KNOP1-203ENST00000565844 MAP3K4Q9Y6R4 1608 aa24.22■■□□□ 1.47
KNOP1-203ENST00000565844 ARID3CA6NKF2 412 aa24.21■■□□□ 1.47
KNOP1-203ENST00000565844 HECW1Q76N89 1606 aa24.19■■□□□ 1.46
KNOP1-203ENST00000565844 WDR7Q9Y4E6 1490 aa24.18■■□□□ 1.46
KNOP1-203ENST00000565844 CASKIN1Q8WXD9 1431 aa24.18■■□□□ 1.46
KNOP1-203ENST00000565844 FYCO1Q9BQS8 1478 aa24.17■■□□□ 1.46
KNOP1-203ENST00000565844 LRRIQ1Q96JM4 1722 aa24.14■■□□□ 1.45
KNOP1-203ENST00000565844 KCNH8Q96L42 1107 aa24.13■■□□□ 1.45
KNOP1-203ENST00000565844 NUP153P49790 1475 aaKnown RBP24.13■■□□□ 1.45
KNOP1-203ENST00000565844 ATP1B4Q9UN42 357 aaPredicted RBP24.12■■□□□ 1.45
KNOP1-203ENST00000565844 COL17A1Q9UMD9 1497 aaPredicted RBP24.07■■□□□ 1.44
KNOP1-203ENST00000565844 CFAP43Q8NDM7 1665 aa24.07■■□□□ 1.44
KNOP1-203ENST00000565844 TEX14Q8IWB6 1497 aa24.05■■□□□ 1.44
KNOP1-203ENST00000565844 ATP10BO94823 1461 aa24.05■■□□□ 1.44
KNOP1-203ENST00000565844 CDK13Q14004 1512 aaKnown RBP24.04■■□□□ 1.44
KNOP1-203ENST00000565844 CCDC18Q5T9S5 1454 aa24.04■■□□□ 1.44
KNOP1-203ENST00000565844 CD109Q6YHK3 1445 aa24.01■■□□□ 1.43
KNOP1-203ENST00000565844 TIAM1Q13009 1591 aa23.98■■□□□ 1.43
KNOP1-203ENST00000565844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.98■■□□□ 1.43
KNOP1-203ENST00000565844 HNRNPUL2Q1KMD3 747 aaKnown RBP23.98■■□□□ 1.43
KNOP1-203ENST00000565844 KDM4FA0A1W2PPD8 638 aa23.97■■□□□ 1.43
KNOP1-203ENST00000565844 MAP3K1Q13233 1512 aa23.94■■□□□ 1.42
KNOP1-203ENST00000565844 MAGI3Q5TCQ9 1506 aa23.94■■□□□ 1.42
KNOP1-203ENST00000565844 APLP2Q06481 763 aa23.93■■□□□ 1.42
KNOP1-203ENST00000565844 ABCA9Q8IUA7 1624 aa23.9■■□□□ 1.42
KNOP1-203ENST00000565844 CDK11AQ9UQ88 783 aaPredicted RBP23.87■■□□□ 1.41
KNOP1-203ENST00000565844 ADGRL1O94910 1474 aa23.85■■□□□ 1.41
KNOP1-203ENST00000565844 EHBP1L1Q8N3D4 1523 aa23.84■■□□□ 1.41
KNOP1-203ENST00000565844 LRRC9Q6ZRR7 1453 aa23.84■■□□□ 1.41
KNOP1-203ENST00000565844 PLEKHD1A6NEE1 506 aa23.83■■□□□ 1.41
KNOP1-203ENST00000565844 MTUS2Q5JR59 1369 aa23.83■■□□□ 1.4
KNOP1-203ENST00000565844 TROQ12816 1431 aaPredicted RBP23.81■■□□□ 1.4
KNOP1-203ENST00000565844 KANK4Q5T7N3 995 aaPredicted RBP23.79■■□□□ 1.4
KNOP1-203ENST00000565844 KIF14Q15058 1648 aa23.79■■□□□ 1.4
KNOP1-203ENST00000565844 SUPT6HQ7KZ85 1726 aaKnown RBP23.77■■□□□ 1.4
KNOP1-203ENST00000565844 ARAP3Q8WWN8 1544 aa23.75■■□□□ 1.39
KNOP1-203ENST00000565844 TTC37Q6PGP7 1564 aa23.74■■□□□ 1.39
KNOP1-203ENST00000565844 PPARGC1BQ86YN6 1023 aaKnown RBP23.73■■□□□ 1.39
KNOP1-203ENST00000565844 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.72■■□□□ 1.39
KNOP1-203ENST00000565844 RAPGEF3O95398 923 aa23.7■■□□□ 1.38
KNOP1-203ENST00000565844 FRMPD1Q5SYB0 1578 aa23.69■■□□□ 1.38
KNOP1-203ENST00000565844 NEO1Q92859 1461 aa23.69■■□□□ 1.38
KNOP1-203ENST00000565844 NCOA2Q15596 1464 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms