RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 TRHP20396 242 aaPredicted RBP25.6■■□□□ 1.69
USB1-210ENST00000565151 JPH4Q96JJ6 628 aa25.59■■□□□ 1.69
USB1-210ENST00000565151 PRG4Q92954 1404 aaPredicted RBP25.59■■□□□ 1.69
USB1-210ENST00000565151 CARMIL1Q5VZK9 1371 aa25.5■■□□□ 1.67
USB1-210ENST00000565151 KIAA0586Q9BVV6 1533 aa25.5■■□□□ 1.67
USB1-210ENST00000565151 KIF13AQ9H1H9 1805 aa25.4■■□□□ 1.66
USB1-210ENST00000565151 ADCY10Q96PN6 1610 aa25.37■■□□□ 1.65
USB1-210ENST00000565151 IQGAP2Q13576 1575 aa25.32■■□□□ 1.64
USB1-210ENST00000565151 RAPGEF2Q9Y4G8 1499 aa25.3■■□□□ 1.64
USB1-210ENST00000565151 DISP1Q96F81 1524 aa25.24■■□□□ 1.63
USB1-210ENST00000565151 CTTNBP2Q8WZ74 1663 aa25.21■■□□□ 1.63
USB1-210ENST00000565151 MAPKBP1O60336 1514 aa25.21■■□□□ 1.63
USB1-210ENST00000565151 UGGT2Q9NYU1 1516 aa25.19■■□□□ 1.62
USB1-210ENST00000565151 PTPRGP23470 1445 aa25.19■■□□□ 1.62
USB1-210ENST00000565151 PRXQ9BXM0 1461 aa25.16■■□□□ 1.62
USB1-210ENST00000565151 TNIKQ9UKE5 1360 aa25.16■■□□□ 1.62
USB1-210ENST00000565151 DIP2BQ9P265 1576 aa25.15■■□□□ 1.62
USB1-210ENST00000565151 CARMIL2Q6F5E8 1435 aa25.15■■□□□ 1.62
USB1-210ENST00000565151 TTBK1Q5TCY1 1321 aaPredicted RBP25.14■■□□□ 1.62
USB1-210ENST00000565151 ABCC10Q5T3U5 1492 aa25.14■■□□□ 1.61
USB1-210ENST00000565151 KIAA0556O60303 1618 aa25.12■■□□□ 1.61
USB1-210ENST00000565151 NPM1P06748 294 aaKnown RBP eCLIP25.08■■□□□ 1.61
USB1-210ENST00000565151 TSPOAP1O95153 1857 aa25.06■■□□□ 1.6
USB1-210ENST00000565151 FAM69CQ0P6D2 419 aa25.05■■□□□ 1.6
USB1-210ENST00000565151 ABCC2Q92887 1545 aa25.05■■□□□ 1.6
USB1-210ENST00000565151 UHRF1BP1LA0JNW5 1464 aa25.04■■□□□ 1.6
USB1-210ENST00000565151 UACAQ9BZF9 1416 aa25.02■■□□□ 1.6
USB1-210ENST00000565151 ZCCHC11Q5TAX3 1644 aaKnown RBP24.97■■□□□ 1.59
USB1-210ENST00000565151 KDM5BQ9UGL1 1544 aa24.96■■□□□ 1.59
USB1-210ENST00000565151 ASXL2Q76L83 1435 aa24.95■■□□□ 1.59
USB1-210ENST00000565151 CSRNP3Q8WYN3 585 aa24.95■■□□□ 1.58
USB1-210ENST00000565151 PPRC1Q5VV67 1664 aaKnown RBP24.94■■□□□ 1.58
USB1-210ENST00000565151 PLB1Q6P1J6 1458 aa24.92■■□□□ 1.58
USB1-210ENST00000565151 ABCA8O94911 1581 aa24.9■■□□□ 1.58
USB1-210ENST00000565151 GOLGA3Q08378 1498 aa24.89■■□□□ 1.57
USB1-210ENST00000565151 GLI2P10070 1586 aa24.88■■□□□ 1.57
USB1-210ENST00000565151 EEA1Q15075 1411 aa24.84■■□□□ 1.57
USB1-210ENST00000565151 SAMD9Q5K651 1589 aa24.84■■□□□ 1.57
USB1-210ENST00000565151 EPRSP07814 1512 aaKnown RBP24.82■■□□□ 1.56
USB1-210ENST00000565151 FAM9AQ8IZU1 332 aaPredicted RBP24.82■■□□□ 1.56
USB1-210ENST00000565151 KDM6BO15054 1643 aa24.82■■□□□ 1.56
USB1-210ENST00000565151 MAP3K4Q9Y6R4 1608 aa24.82■■□□□ 1.56
USB1-210ENST00000565151 P3H3Q8IVL6 736 aa24.79■■□□□ 1.56
USB1-210ENST00000565151 CHIC1Q5VXU3 224 aa24.78■■□□□ 1.56
USB1-210ENST00000565151 KIF21BO75037 1637 aa24.76■■□□□ 1.55
USB1-210ENST00000565151 WDR7Q9Y4E6 1490 aa24.73■■□□□ 1.55
USB1-210ENST00000565151 COL17A1Q9UMD9 1497 aaPredicted RBP24.7■■□□□ 1.54
USB1-210ENST00000565151 ATP10BO94823 1461 aa24.67■■□□□ 1.54
USB1-210ENST00000565151 RAPGEF6Q8TEU7 1601 aa24.66■■□□□ 1.54
USB1-210ENST00000565151 ARID3CA6NKF2 412 aa24.64■■□□□ 1.54
USB1-210ENST00000565151 CFAP43Q8NDM7 1665 aa24.63■■□□□ 1.53
USB1-210ENST00000565151 RANGAP1P46060 587 aaPredicted RBP24.63■■□□□ 1.53
USB1-210ENST00000565151 FHOD3Q2V2M9 1422 aa24.62■■□□□ 1.53
USB1-210ENST00000565151 KCNH8Q96L42 1107 aa24.59■■□□□ 1.53
USB1-210ENST00000565151 NUP153P49790 1475 aaKnown RBP24.57■■□□□ 1.52
USB1-210ENST00000565151 EHMT2Q96KQ7 1210 aa24.56■■□□□ 1.52
USB1-210ENST00000565151 TEX14Q8IWB6 1497 aa24.55■■□□□ 1.52
USB1-210ENST00000565151 MAGI3Q5TCQ9 1506 aa24.54■■□□□ 1.52
USB1-210ENST00000565151 CD109Q6YHK3 1445 aa24.53■■□□□ 1.52
USB1-210ENST00000565151 EFCAB5A4FU69 1503 aa24.53■■□□□ 1.52
USB1-210ENST00000565151 KDM4FA0A1W2PPD8 638 aa24.51■■□□□ 1.51
USB1-210ENST00000565151 ABCA9Q8IUA7 1624 aa24.5■■□□□ 1.51
USB1-210ENST00000565151 UBTFP17480 764 aaKnown RBP24.43■■□□□ 1.5
USB1-210ENST00000565151 ARHGAP35Q9NRY4 1499 aa24.43■■□□□ 1.5
USB1-210ENST00000565151 CDK13Q14004 1512 aaKnown RBP24.38■■□□□ 1.49
USB1-210ENST00000565151 LRRIQ1Q96JM4 1722 aa24.38■■□□□ 1.49
USB1-210ENST00000565151 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.36■■□□□ 1.49
USB1-210ENST00000565151 HNRNPUL2Q1KMD3 747 aaKnown RBP24.36■■□□□ 1.49
USB1-210ENST00000565151 ARAP3Q8WWN8 1544 aa24.35■■□□□ 1.49
USB1-210ENST00000565151 ADGRL1O94910 1474 aa24.32■■□□□ 1.48
USB1-210ENST00000565151 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.31■■□□□ 1.48
USB1-210ENST00000565151 TTC37Q6PGP7 1564 aa24.31■■□□□ 1.48
USB1-210ENST00000565151 FRMPD1Q5SYB0 1578 aa24.29■■□□□ 1.48
USB1-210ENST00000565151 PLEKHD1A6NEE1 506 aa24.27■■□□□ 1.48
USB1-210ENST00000565151 HECW1Q76N89 1606 aa24.26■■□□□ 1.47
USB1-210ENST00000565151 NEO1Q92859 1461 aa24.26■■□□□ 1.47
USB1-210ENST00000565151 FMN1Q68DA7 1419 aa24.25■■□□□ 1.47
USB1-210ENST00000565151 RICTORQ6R327 1708 aa24.22■■□□□ 1.47
USB1-210ENST00000565151 RAPGEF3O95398 923 aa24.22■■□□□ 1.47
USB1-210ENST00000565151 PHLDB1Q86UU1 1377 aa24.2■■□□□ 1.46
USB1-210ENST00000565151 KIF14Q15058 1648 aa24.2■■□□□ 1.46
USB1-210ENST00000565151 PCF11O94913 1555 aaKnown RBP24.17■■□□□ 1.46
USB1-210ENST00000565151 ATP1B4Q9UN42 357 aaPredicted RBP24.16■■□□□ 1.46
USB1-210ENST00000565151 FANCAO15360 1455 aa24.15■■□□□ 1.46
USB1-210ENST00000565151 AKNAQ7Z591 1439 aa24.14■■□□□ 1.45
USB1-210ENST00000565151 MYO5CQ9NQX4 1742 aa24.13■■□□□ 1.45
USB1-210ENST00000565151 CFAP74Q9C0B2 1584 aa24.13■■□□□ 1.45
USB1-210ENST00000565151 SIGLEC1Q9BZZ2 1709 aa24.1■■□□□ 1.45
USB1-210ENST00000565151 PLCH2O75038 1416 aa24.09■■□□□ 1.45
USB1-210ENST00000565151 CASKIN1Q8WXD9 1431 aa24.09■■□□□ 1.45
USB1-210ENST00000565151 TROQ12816 1431 aaPredicted RBP24.08■■□□□ 1.44
USB1-210ENST00000565151 DENND4BO75064 1496 aaPredicted RBP24.07■■□□□ 1.44
USB1-210ENST00000565151 ADAMTSL3P82987 1691 aa24.07■■□□□ 1.44
USB1-210ENST00000565151 CDC42BPBQ9Y5S2 1711 aa24.06■■□□□ 1.44
USB1-210ENST00000565151 CLIP1P30622 1438 aa24.05■■□□□ 1.44
USB1-210ENST00000565151 ARHGEF40Q8TER5 1519 aa24.05■■□□□ 1.44
USB1-210ENST00000565151 ZMYM4Q5VZL5 1548 aa24.04■■□□□ 1.44
USB1-210ENST00000565151 BCORL1Q5H9F3 1711 aa24.03■■□□□ 1.44
USB1-210ENST00000565151 FYCO1Q9BQS8 1478 aa24■■□□□ 1.43
USB1-210ENST00000565151 YEATS2Q9ULM3 1422 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms