RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 CEP170Q5SW79 1584 aa23.12■■□□□ 1.29
CNOT1-206ENST00000564557 CUL7Q14999 1698 aa23.12■■□□□ 1.29
CNOT1-206ENST00000564557 ADRA2BP18089 450 aa23.11■■□□□ 1.29
CNOT1-206ENST00000564557 CARMIL1Q5VZK9 1371 aa23.09■■□□□ 1.29
CNOT1-206ENST00000564557 ARAP1Q96P48 1450 aa23.09■■□□□ 1.29
CNOT1-206ENST00000564557 JPH4Q96JJ6 628 aa23.02■■□□□ 1.28
CNOT1-206ENST00000564557 RUSC2Q8N2Y8 1516 aa22.98■■□□□ 1.27
CNOT1-206ENST00000564557 SHROOM2Q13796 1616 aa22.95■■□□□ 1.26
CNOT1-206ENST00000564557 PRG4Q92954 1404 aaPredicted RBP22.95■■□□□ 1.26
CNOT1-206ENST00000564557 KIAA0586Q9BVV6 1533 aa22.94■■□□□ 1.26
CNOT1-206ENST00000564557 RAPGEF2Q9Y4G8 1499 aa22.92■■□□□ 1.26
CNOT1-206ENST00000564557 ERCC6L2Q5T890 1561 aa22.91■■□□□ 1.26
CNOT1-206ENST00000564557 TRHP20396 242 aaPredicted RBP22.85■■□□□ 1.25
CNOT1-206ENST00000564557 CSRNP3Q8WYN3 585 aa22.81■■□□□ 1.24
CNOT1-206ENST00000564557 PIAS4Q8N2W9 510 aaPredicted RBP22.8■■□□□ 1.24
CNOT1-206ENST00000564557 IQGAP2Q13576 1575 aa22.79■■□□□ 1.24
CNOT1-206ENST00000564557 CARMIL2Q6F5E8 1435 aa22.78■■□□□ 1.24
CNOT1-206ENST00000564557 EEA1Q15075 1411 aa22.77■■□□□ 1.24
CNOT1-206ENST00000564557 FAM9AQ8IZU1 332 aaPredicted RBP22.76■■□□□ 1.23
CNOT1-206ENST00000564557 TTBK1Q5TCY1 1321 aaPredicted RBP22.75■■□□□ 1.23
CNOT1-206ENST00000564557 PRXQ9BXM0 1461 aa22.74■■□□□ 1.23
CNOT1-206ENST00000564557 NPM1P06748 294 aaKnown RBP eCLIP22.73■■□□□ 1.23
CNOT1-206ENST00000564557 PTPRGP23470 1445 aa22.69■■□□□ 1.22
CNOT1-206ENST00000564557 TNIKQ9UKE5 1360 aa22.67■■□□□ 1.22
CNOT1-206ENST00000564557 CTTNBP2Q8WZ74 1663 aa22.65■■□□□ 1.22
CNOT1-206ENST00000564557 UGGT2Q9NYU1 1516 aa22.63■■□□□ 1.21
CNOT1-206ENST00000564557 DISP1Q96F81 1524 aa22.59■■□□□ 1.21
CNOT1-206ENST00000564557 GOLGA3Q08378 1498 aa22.59■■□□□ 1.21
CNOT1-206ENST00000564557 KIAA0556O60303 1618 aa22.55■■□□□ 1.2
CNOT1-206ENST00000564557 ADCY10Q96PN6 1610 aa22.53■■□□□ 1.2
CNOT1-206ENST00000564557 UACAQ9BZF9 1416 aa22.5■■□□□ 1.19
CNOT1-206ENST00000564557 RANGAP1P46060 587 aaPredicted RBP22.5■■□□□ 1.19
CNOT1-206ENST00000564557 EHMT2Q96KQ7 1210 aa22.5■■□□□ 1.19
CNOT1-206ENST00000564557 UBTFP17480 764 aaKnown RBP22.48■■□□□ 1.19
CNOT1-206ENST00000564557 KIF21BO75037 1637 aa22.48■■□□□ 1.19
CNOT1-206ENST00000564557 P3H3Q8IVL6 736 aa22.47■■□□□ 1.19
CNOT1-206ENST00000564557 UHRF1BP1LA0JNW5 1464 aa22.44■■□□□ 1.18
CNOT1-206ENST00000564557 MSH5O43196 834 aa22.44■■□□□ 1.18
CNOT1-206ENST00000564557 MAPKBP1O60336 1514 aa22.44■■□□□ 1.18
CNOT1-206ENST00000564557 FAM69CQ0P6D2 419 aa22.44■■□□□ 1.18
CNOT1-206ENST00000564557 ABCC2Q92887 1545 aa22.44■■□□□ 1.18
CNOT1-206ENST00000564557 ABCC10Q5T3U5 1492 aa22.38■■□□□ 1.17
CNOT1-206ENST00000564557 PLB1Q6P1J6 1458 aa22.36■■□□□ 1.17
CNOT1-206ENST00000564557 KIF13AQ9H1H9 1805 aa22.34■■□□□ 1.17
CNOT1-206ENST00000564557 ASXL2Q76L83 1435 aa22.33■■□□□ 1.17
CNOT1-206ENST00000564557 KDM5BQ9UGL1 1544 aa22.33■■□□□ 1.17
CNOT1-206ENST00000564557 SAMD9Q5K651 1589 aa22.33■■□□□ 1.16
CNOT1-206ENST00000564557 DIP2BQ9P265 1576 aa22.3■■□□□ 1.16
CNOT1-206ENST00000564557 ABCA8O94911 1581 aa22.29■■□□□ 1.16
CNOT1-206ENST00000564557 ZCCHC11Q5TAX3 1644 aaKnown RBP22.28■■□□□ 1.16
CNOT1-206ENST00000564557 EFCAB5A4FU69 1503 aa22.26■■□□□ 1.15
CNOT1-206ENST00000564557 FHOD3Q2V2M9 1422 aa22.26■■□□□ 1.15
CNOT1-206ENST00000564557 ARID3CA6NKF2 412 aa22.26■■□□□ 1.15
CNOT1-206ENST00000564557 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.25■■□□□ 1.15
CNOT1-206ENST00000564557 HNRNPUL2Q1KMD3 747 aaKnown RBP22.25■■□□□ 1.15
CNOT1-206ENST00000564557 KCNH8Q96L42 1107 aa22.2■■□□□ 1.14
CNOT1-206ENST00000564557 WDR7Q9Y4E6 1490 aa22.19■■□□□ 1.14
CNOT1-206ENST00000564557 RAPGEF6Q8TEU7 1601 aa22.19■■□□□ 1.14
CNOT1-206ENST00000564557 TSPOAP1O95153 1857 aa22.19■■□□□ 1.14
CNOT1-206ENST00000564557 GLI2P10070 1586 aa22.17■■□□□ 1.14
CNOT1-206ENST00000564557 EPRSP07814 1512 aaKnown RBP22.17■■□□□ 1.14
CNOT1-206ENST00000564557 ATP1B4Q9UN42 357 aaPredicted RBP22.15■■□□□ 1.14
CNOT1-206ENST00000564557 ATP10BO94823 1461 aa22.15■■□□□ 1.14
CNOT1-206ENST00000564557 FMN1Q68DA7 1419 aa22.12■■□□□ 1.13
CNOT1-206ENST00000564557 ARHGAP35Q9NRY4 1499 aa22.11■■□□□ 1.13
CNOT1-206ENST00000564557 NUP153P49790 1475 aaKnown RBP22.09■■□□□ 1.13
CNOT1-206ENST00000564557 PLEKHD1A6NEE1 506 aa22.08■■□□□ 1.13
CNOT1-206ENST00000564557 TEX14Q8IWB6 1497 aa22.06■■□□□ 1.12
CNOT1-206ENST00000564557 MAP3K4Q9Y6R4 1608 aa22.05■■□□□ 1.12
CNOT1-206ENST00000564557 CD109Q6YHK3 1445 aa22.05■■□□□ 1.12
CNOT1-206ENST00000564557 KDM6BO15054 1643 aa22.04■■□□□ 1.12
CNOT1-206ENST00000564557 CFAP43Q8NDM7 1665 aa22.01■■□□□ 1.11
CNOT1-206ENST00000564557 CLIP1P30622 1438 aa22■■□□□ 1.11
CNOT1-206ENST00000564557 CDK11AQ9UQ88 783 aaPredicted RBP21.99■■□□□ 1.11
CNOT1-206ENST00000564557 HECW1Q76N89 1606 aa21.98■■□□□ 1.11
CNOT1-206ENST00000564557 PPRC1Q5VV67 1664 aaKnown RBP21.98■■□□□ 1.11
CNOT1-206ENST00000564557 MAGI3Q5TCQ9 1506 aa21.95■■□□□ 1.1
CNOT1-206ENST00000564557 CDK13Q14004 1512 aaKnown RBP21.93■■□□□ 1.1
CNOT1-206ENST00000564557 ABCA9Q8IUA7 1624 aa21.9■■□□□ 1.1
CNOT1-206ENST00000564557 LOC105371045A0A1W2PR82 267 aa21.89■■□□□ 1.09
CNOT1-206ENST00000564557 CASKIN1Q8WXD9 1431 aa21.89■■□□□ 1.09
CNOT1-206ENST00000564557 CEP162Q5TB80 1403 aa21.85■■□□□ 1.09
CNOT1-206ENST00000564557 PHLDB1Q86UU1 1377 aa21.84■■□□□ 1.09
CNOT1-206ENST00000564557 CCDC18Q5T9S5 1454 aa21.83■■□□□ 1.09
CNOT1-206ENST00000564557 PCF11O94913 1555 aaKnown RBP21.83■■□□□ 1.09
CNOT1-206ENST00000564557 COL17A1Q9UMD9 1497 aaPredicted RBP21.83■■□□□ 1.08
CNOT1-206ENST00000564557 FYCO1Q9BQS8 1478 aa21.82■■□□□ 1.08
CNOT1-206ENST00000564557 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.8■■□□□ 1.08
CNOT1-206ENST00000564557 NEO1Q92859 1461 aa21.79■■□□□ 1.08
CNOT1-206ENST00000564557 TROQ12816 1431 aaPredicted RBP21.79■■□□□ 1.08
CNOT1-206ENST00000564557 ARAP3Q8WWN8 1544 aa21.75■■□□□ 1.07
CNOT1-206ENST00000564557 LRRIQ1Q96JM4 1722 aa21.75■■□□□ 1.07
CNOT1-206ENST00000564557 KIF14Q15058 1648 aa21.75■■□□□ 1.07
CNOT1-206ENST00000564557 TTC37Q6PGP7 1564 aa21.74■■□□□ 1.07
CNOT1-206ENST00000564557 FANCAO15360 1455 aa21.73■■□□□ 1.07
CNOT1-206ENST00000564557 EFCAB2Q5VUJ9 269 aa21.72■■□□□ 1.07
CNOT1-206ENST00000564557 CFAP74Q9C0B2 1584 aa21.72■■□□□ 1.07
CNOT1-206ENST00000564557 AKNAQ7Z591 1439 aa21.72■■□□□ 1.07
CNOT1-206ENST00000564557 RAPGEF3O95398 923 aa21.71■■□□□ 1.07
CNOT1-206ENST00000564557 PLCH2O75038 1416 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms