RNA–Protein interactions for RNA: ENST00000564408.5

UTP4-206, Transcript of UTP4, small subunit processome component, humanhuman

TSL 3

Gene UTP4, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UTP4-206ENST00000564408 GRIN2AQ12879 1464 aa13.69□□□□□ -0.22
UTP4-206ENST00000564408 UBTFP17480 764 aaKnown RBP13.67□□□□□ -0.22
UTP4-206ENST00000564408 CHMP7Q8WUX9 453 aaPredicted RBP13.67□□□□□ -0.22
UTP4-206ENST00000564408 ARHGEF11O15085 1522 aa13.66□□□□□ -0.22
UTP4-206ENST00000564408 NUP160Q12769 1436 aa13.64□□□□□ -0.23
UTP4-206ENST00000564408 CTTNBP2Q8WZ74 1663 aa13.64□□□□□ -0.23
UTP4-206ENST00000564408 EHMT2Q96KQ7 1210 aa13.63□□□□□ -0.23
UTP4-206ENST00000564408 KIAA0586Q9BVV6 1533 aa13.61□□□□□ -0.23
UTP4-206ENST00000564408 CEP170Q5SW79 1584 aa13.61□□□□□ -0.23
UTP4-206ENST00000564408 CLASP1Q7Z460 1538 aa13.6□□□□□ -0.23
UTP4-206ENST00000564408 CEP162Q5TB80 1403 aa13.57□□□□□ -0.24
UTP4-206ENST00000564408 IQGAP2Q13576 1575 aa13.57□□□□□ -0.24
UTP4-206ENST00000564408 ARAP1Q96P48 1450 aa13.56□□□□□ -0.24
UTP4-206ENST00000564408 CYB5RLQ6IPT4 315 aa13.56□□□□□ -0.24
UTP4-206ENST00000564408 UGGT2Q9NYU1 1516 aa13.54□□□□□ -0.24
UTP4-206ENST00000564408 CLIP1P30622 1438 aa13.54□□□□□ -0.24
UTP4-206ENST00000564408 EFCAB5A4FU69 1503 aa13.52□□□□□ -0.25
UTP4-206ENST00000564408 ERCC6L2Q5T890 1561 aa13.52□□□□□ -0.25
UTP4-206ENST00000564408 SAMD9Q5K651 1589 aa13.51□□□□□ -0.25
UTP4-206ENST00000564408 ARHGAP35Q9NRY4 1499 aa13.51□□□□□ -0.25
UTP4-206ENST00000564408 SHROOM2Q13796 1616 aa13.5□□□□□ -0.25
UTP4-206ENST00000564408 JPH4Q96JJ6 628 aa13.49□□□□□ -0.25
UTP4-206ENST00000564408 DISP1Q96F81 1524 aa13.47□□□□□ -0.25
UTP4-206ENST00000564408 KIAA0556O60303 1618 aa13.44□□□□□ -0.26
UTP4-206ENST00000564408 RANGAP1P46060 587 aaPredicted RBP13.43□□□□□ -0.26
UTP4-206ENST00000564408 CARMIL2Q6F5E8 1435 aa13.42□□□□□ -0.26
UTP4-206ENST00000564408 VPS8Q8N3P4 1428 aa13.41□□□□□ -0.26
UTP4-206ENST00000564408 PRG4Q92954 1404 aaPredicted RBP13.41□□□□□ -0.26
UTP4-206ENST00000564408 FHOD3Q2V2M9 1422 aa13.39□□□□□ -0.27
UTP4-206ENST00000564408 FMN1Q68DA7 1419 aa13.39□□□□□ -0.27
UTP4-206ENST00000564408 P3H3Q8IVL6 736 aa13.37□□□□□ -0.27
UTP4-206ENST00000564408 TRHP20396 242 aaPredicted RBP13.36□□□□□ -0.27
UTP4-206ENST00000564408 TTBK1Q5TCY1 1321 aaPredicted RBP13.34□□□□□ -0.27
UTP4-206ENST00000564408 CASKIN1Q8WXD9 1431 aa13.33□□□□□ -0.28
UTP4-206ENST00000564408 PTPRGP23470 1445 aa13.31□□□□□ -0.28
UTP4-206ENST00000564408 FYCO1Q9BQS8 1478 aa13.31□□□□□ -0.28
UTP4-206ENST00000564408 MAP3K1Q13233 1512 aa13.29□□□□□ -0.28
UTP4-206ENST00000564408 PCF11O94913 1555 aaKnown RBP13.29□□□□□ -0.28
UTP4-206ENST00000564408 ABCA8O94911 1581 aa13.28□□□□□ -0.28
UTP4-206ENST00000564408 RAPGEF6Q8TEU7 1601 aa13.28□□□□□ -0.28
UTP4-206ENST00000564408 HECW1Q76N89 1606 aa13.26□□□□□ -0.29
UTP4-206ENST00000564408 PLB1Q6P1J6 1458 aa13.25□□□□□ -0.29
UTP4-206ENST00000564408 UACAQ9BZF9 1416 aa13.25□□□□□ -0.29
UTP4-206ENST00000564408 UHRF1BP1LA0JNW5 1464 aa13.24□□□□□ -0.29
UTP4-206ENST00000564408 LRRIQ1Q96JM4 1722 aa13.24□□□□□ -0.29
UTP4-206ENST00000564408 NUP153P49790 1475 aaKnown RBP13.23□□□□□ -0.29
UTP4-206ENST00000564408 CCDC18Q5T9S5 1454 aa13.23□□□□□ -0.29
UTP4-206ENST00000564408 ADCY10Q96PN6 1610 aa13.22□□□□□ -0.29
UTP4-206ENST00000564408 TIAM1Q13009 1591 aa13.22□□□□□ -0.29
UTP4-206ENST00000564408 EPRSP07814 1512 aaKnown RBP13.22□□□□□ -0.29
UTP4-206ENST00000564408 CFAP43Q8NDM7 1665 aa13.21□□□□□ -0.29
UTP4-206ENST00000564408 ABCC2Q92887 1545 aa13.21□□□□□ -0.29
UTP4-206ENST00000564408 APLP2Q06481 763 aa13.2□□□□□ -0.3
UTP4-206ENST00000564408 KIF13AQ9H1H9 1805 aa13.18□□□□□ -0.3
UTP4-206ENST00000564408 ATP10BO94823 1461 aa13.17□□□□□ -0.3
UTP4-206ENST00000564408 KDM5BQ9UGL1 1544 aa13.17□□□□□ -0.3
UTP4-206ENST00000564408 LRRC9Q6ZRR7 1453 aa13.16□□□□□ -0.3
UTP4-206ENST00000564408 ATP1B4Q9UN42 357 aaPredicted RBP13.16□□□□□ -0.3
UTP4-206ENST00000564408 CDK13Q14004 1512 aaKnown RBP13.15□□□□□ -0.3
UTP4-206ENST00000564408 KANK4Q5T7N3 995 aaPredicted RBP13.15□□□□□ -0.3
UTP4-206ENST00000564408 MAGI3Q5TCQ9 1506 aa13.13□□□□□ -0.31
UTP4-206ENST00000564408 CDK11AQ9UQ88 783 aaPredicted RBP13.12□□□□□ -0.31
UTP4-206ENST00000564408 ZCCHC11Q5TAX3 1644 aaKnown RBP13.11□□□□□ -0.31
UTP4-206ENST00000564408 TSPOAP1O95153 1857 aa13.11□□□□□ -0.31
UTP4-206ENST00000564408 EHBP1L1Q8N3D4 1523 aa13.11□□□□□ -0.31
UTP4-206ENST00000564408 NPM1P06748 294 aaKnown RBP eCLIP13.1□□□□□ -0.31
UTP4-206ENST00000564408 TROQ12816 1431 aaPredicted RBP13.09□□□□□ -0.31
UTP4-206ENST00000564408 MTUS2Q5JR59 1369 aa13.08□□□□□ -0.31
UTP4-206ENST00000564408 DIP2BQ9P265 1576 aa13.08□□□□□ -0.32
UTP4-206ENST00000564408 PLEKHD1A6NEE1 506 aa13.08□□□□□ -0.32
UTP4-206ENST00000564408 ARID3CA6NKF2 412 aa13.07□□□□□ -0.32
UTP4-206ENST00000564408 SUPT6HQ7KZ85 1726 aaKnown RBP13.06□□□□□ -0.32
UTP4-206ENST00000564408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.06□□□□□ -0.32
UTP4-206ENST00000564408 FAM69CQ0P6D2 419 aa13.06□□□□□ -0.32
UTP4-206ENST00000564408 HNRNPUL2Q1KMD3 747 aaKnown RBP13.06□□□□□ -0.32
UTP4-206ENST00000564408 PPARGC1BQ86YN6 1023 aaKnown RBP13.06□□□□□ -0.32
UTP4-206ENST00000564408 MAPKBP1O60336 1514 aa13.06□□□□□ -0.32
UTP4-206ENST00000564408 NCOA2Q15596 1464 aa13.04□□□□□ -0.32
UTP4-206ENST00000564408 ABCC10Q5T3U5 1492 aa13.04□□□□□ -0.32
UTP4-206ENST00000564408 WDR7Q9Y4E6 1490 aa13.02□□□□□ -0.33
UTP4-206ENST00000564408 PHLDB1Q86UU1 1377 aa13.01□□□□□ -0.33
UTP4-206ENST00000564408 ASXL2Q76L83 1435 aa13.01□□□□□ -0.33
UTP4-206ENST00000564408 KIF14Q15058 1648 aa13.01□□□□□ -0.33
UTP4-206ENST00000564408 RRBP1Q9P2E9 1410 aaKnown RBP12.99□□□□□ -0.33
UTP4-206ENST00000564408 MYOM3Q5VTT5 1437 aa12.98□□□□□ -0.33
UTP4-206ENST00000564408 TRIM26Q12899 539 aaPredicted RBP12.98□□□□□ -0.33
UTP4-206ENST00000564408 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.97□□□□□ -0.33
UTP4-206ENST00000564408 MIA2Q96PC5 1412 aa12.96□□□□□ -0.33
UTP4-206ENST00000564408 GPATCH8Q9UKJ3 1502 aaKnown RBP12.96□□□□□ -0.33
UTP4-206ENST00000564408 PPRC1Q5VV67 1664 aaKnown RBP12.96□□□□□ -0.34
UTP4-206ENST00000564408 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.95□□□□□ -0.34
UTP4-206ENST00000564408 ABCA9Q8IUA7 1624 aa12.95□□□□□ -0.34
UTP4-206ENST00000564408 CCNB3Q8WWL7 1395 aa12.94□□□□□ -0.34
UTP4-206ENST00000564408 CDC42BPAQ5VT25 1732 aa12.94□□□□□ -0.34
UTP4-206ENST00000564408 ITSN2Q9NZM3 1697 aa12.94□□□□□ -0.34
UTP4-206ENST00000564408 FGD6Q6ZV73 1430 aa12.94□□□□□ -0.34
UTP4-206ENST00000564408 TTC37Q6PGP7 1564 aa12.94□□□□□ -0.34
UTP4-206ENST00000564408 KCNH8Q96L42 1107 aa12.93□□□□□ -0.34
UTP4-206ENST00000564408 GLI2P10070 1586 aa12.93□□□□□ -0.34
UTP4-206ENST00000564408 ARAP3Q8WWN8 1544 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms