RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 RUSC2Q8N2Y8 1516 aa30.73■■■□□ 2.51
PKD1-227ENST00000564313 CHIC1Q5VXU3 224 aa30.72■■■□□ 2.51
PKD1-227ENST00000564313 EEA1Q15075 1411 aa30.64■■■□□ 2.5
PKD1-227ENST00000564313 RAPGEF2Q9Y4G8 1499 aa30.62■■■□□ 2.49
PKD1-227ENST00000564313 KIF13AQ9H1H9 1805 aa30.57■■■□□ 2.48
PKD1-227ENST00000564313 SHROOM2Q13796 1616 aa30.57■■■□□ 2.48
PKD1-227ENST00000564313 KIAA0586Q9BVV6 1533 aa30.55■■■□□ 2.48
PKD1-227ENST00000564313 PRXQ9BXM0 1461 aa30.51■■■□□ 2.48
PKD1-227ENST00000564313 CSRNP3Q8WYN3 585 aa30.49■■■□□ 2.47
PKD1-227ENST00000564313 JPH4Q96JJ6 628 aa30.48■■■□□ 2.47
PKD1-227ENST00000564313 PRG4Q92954 1404 aaPredicted RBP30.43■■■□□ 2.46
PKD1-227ENST00000564313 IQGAP2Q13576 1575 aa30.4■■■□□ 2.46
PKD1-227ENST00000564313 CTTNBP2Q8WZ74 1663 aa30.34■■■□□ 2.45
PKD1-227ENST00000564313 FAM69CQ0P6D2 419 aa30.34■■■□□ 2.45
PKD1-227ENST00000564313 ABCC10Q5T3U5 1492 aa30.31■■■□□ 2.44
PKD1-227ENST00000564313 FAM9AQ8IZU1 332 aaPredicted RBP30.31■■■□□ 2.44
PKD1-227ENST00000564313 KDM4FA0A1W2PPD8 638 aa30.3■■■□□ 2.44
PKD1-227ENST00000564313 KIF21BO75037 1637 aa30.28■■■□□ 2.44
PKD1-227ENST00000564313 ILDR1Q86SU0 546 aaPredicted RBP30.25■■■□□ 2.43
PKD1-227ENST00000564313 CARMIL2Q6F5E8 1435 aa30.24■■■□□ 2.43
PKD1-227ENST00000564313 UGGT2Q9NYU1 1516 aa30.23■■■□□ 2.43
PKD1-227ENST00000564313 DIP2BQ9P265 1576 aa30.2■■■□□ 2.43
PKD1-227ENST00000564313 NPM1P06748 294 aaKnown RBP eCLIP30.2■■■□□ 2.43
PKD1-227ENST00000564313 MAPKBP1O60336 1514 aa30.2■■■□□ 2.42
PKD1-227ENST00000564313 KDM6BO15054 1643 aa30.16■■■□□ 2.42
PKD1-227ENST00000564313 DISP1Q96F81 1524 aa30.12■■■□□ 2.41
PKD1-227ENST00000564313 GOLGA3Q08378 1498 aa30.12■■■□□ 2.41
PKD1-227ENST00000564313 TNIKQ9UKE5 1360 aa30.11■■■□□ 2.41
PKD1-227ENST00000564313 KIAA0556O60303 1618 aa30.1■■■□□ 2.41
PKD1-227ENST00000564313 ADCY10Q96PN6 1610 aa30.1■■■□□ 2.41
PKD1-227ENST00000564313 PTPRGP23470 1445 aa30.05■■■□□ 2.4
PKD1-227ENST00000564313 TSPOAP1O95153 1857 aa30.04■■■□□ 2.4
PKD1-227ENST00000564313 TTBK1Q5TCY1 1321 aaPredicted RBP30■■■□□ 2.39
PKD1-227ENST00000564313 UBTFP17480 764 aaKnown RBP29.95■■■□□ 2.39
PKD1-227ENST00000564313 SAMD9Q5K651 1589 aa29.94■■■□□ 2.38
PKD1-227ENST00000564313 UACAQ9BZF9 1416 aa29.88■■■□□ 2.37
PKD1-227ENST00000564313 UHRF1BP1LA0JNW5 1464 aa29.87■■■□□ 2.37
PKD1-227ENST00000564313 EFCAB5A4FU69 1503 aa29.87■■■□□ 2.37
PKD1-227ENST00000564313 EHMT2Q96KQ7 1210 aa29.85■■■□□ 2.37
PKD1-227ENST00000564313 ABCC2Q92887 1545 aa29.83■■■□□ 2.37
PKD1-227ENST00000564313 ADGRL1O94910 1474 aa29.81■■■□□ 2.36
PKD1-227ENST00000564313 RANGAP1P46060 587 aaPredicted RBP29.76■■■□□ 2.35
PKD1-227ENST00000564313 ABCA8O94911 1581 aa29.75■■■□□ 2.35
PKD1-227ENST00000564313 P3H3Q8IVL6 736 aa29.75■■■□□ 2.35
PKD1-227ENST00000564313 PPRC1Q5VV67 1664 aaKnown RBP29.75■■■□□ 2.35
PKD1-227ENST00000564313 PLB1Q6P1J6 1458 aa29.73■■■□□ 2.35
PKD1-227ENST00000564313 KDM5BQ9UGL1 1544 aa29.71■■■□□ 2.35
PKD1-227ENST00000564313 FHOD3Q2V2M9 1422 aa29.71■■■□□ 2.35
PKD1-227ENST00000564313 ASXL2Q76L83 1435 aa29.69■■■□□ 2.34
PKD1-227ENST00000564313 GLI2P10070 1586 aa29.69■■■□□ 2.34
PKD1-227ENST00000564313 HECW2Q9P2P5 1572 aa29.68■■■□□ 2.34
PKD1-227ENST00000564313 ARHGAP35Q9NRY4 1499 aa29.65■■■□□ 2.34
PKD1-227ENST00000564313 COL17A1Q9UMD9 1497 aaPredicted RBP29.65■■■□□ 2.34
PKD1-227ENST00000564313 ZCCHC11Q5TAX3 1644 aaKnown RBP29.63■■■□□ 2.33
PKD1-227ENST00000564313 RAPGEF6Q8TEU7 1601 aa29.63■■■□□ 2.33
PKD1-227ENST00000564313 FMN1Q68DA7 1419 aa29.58■■■□□ 2.33
PKD1-227ENST00000564313 CLIP1P30622 1438 aa29.53■■■□□ 2.32
PKD1-227ENST00000564313 EPRSP07814 1512 aaKnown RBP29.5■■■□□ 2.31
PKD1-227ENST00000564313 MAP3K4Q9Y6R4 1608 aa29.49■■■□□ 2.31
PKD1-227ENST00000564313 NUP153P49790 1475 aaKnown RBP29.48■■■□□ 2.31
PKD1-227ENST00000564313 WDR7Q9Y4E6 1490 aa29.48■■■□□ 2.31
PKD1-227ENST00000564313 ATP10BO94823 1461 aa29.47■■■□□ 2.31
PKD1-227ENST00000564313 TEX14Q8IWB6 1497 aa29.45■■■□□ 2.31
PKD1-227ENST00000564313 ARID3CA6NKF2 412 aa29.45■■■□□ 2.31
PKD1-227ENST00000564313 HECW1Q76N89 1606 aa29.43■■■□□ 2.3
PKD1-227ENST00000564313 CEP162Q5TB80 1403 aa29.41■■■□□ 2.3
PKD1-227ENST00000564313 LOC105371045A0A1W2PR82 267 aa29.38■■■□□ 2.29
PKD1-227ENST00000564313 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.36■■■□□ 2.29
PKD1-227ENST00000564313 HNRNPUL2Q1KMD3 747 aaKnown RBP29.36■■■□□ 2.29
PKD1-227ENST00000564313 KCNH8Q96L42 1107 aa29.33■■■□□ 2.29
PKD1-227ENST00000564313 CASKIN1Q8WXD9 1431 aa29.33■■■□□ 2.29
PKD1-227ENST00000564313 FBXO41Q8TF61 875 aa29.32■■■□□ 2.28
PKD1-227ENST00000564313 PCF11O94913 1555 aaKnown RBP29.3■■■□□ 2.28
PKD1-227ENST00000564313 FYCO1Q9BQS8 1478 aa29.29■■■□□ 2.28
PKD1-227ENST00000564313 ATP1B4Q9UN42 357 aaPredicted RBP29.28■■■□□ 2.28
PKD1-227ENST00000564313 PLEKHD1A6NEE1 506 aa29.27■■■□□ 2.28
PKD1-227ENST00000564313 CDK13Q14004 1512 aaKnown RBP29.26■■■□□ 2.27
PKD1-227ENST00000564313 CFAP43Q8NDM7 1665 aa29.25■■■□□ 2.27
PKD1-227ENST00000564313 CCDC18Q5T9S5 1454 aa29.25■■■□□ 2.27
PKD1-227ENST00000564313 CDK11AQ9UQ88 783 aaPredicted RBP29.22■■■□□ 2.27
PKD1-227ENST00000564313 ABCA9Q8IUA7 1624 aa29.19■■■□□ 2.26
PKD1-227ENST00000564313 CD109Q6YHK3 1445 aa29.19■■■□□ 2.26
PKD1-227ENST00000564313 LRRIQ1Q96JM4 1722 aa29.18■■■□□ 2.26
PKD1-227ENST00000564313 MAGI3Q5TCQ9 1506 aa29.17■■■□□ 2.26
PKD1-227ENST00000564313 TROQ12816 1431 aaPredicted RBP29.09■■■□□ 2.25
PKD1-227ENST00000564313 VPS8Q8N3P4 1428 aa29.08■■■□□ 2.25
PKD1-227ENST00000564313 KIF14Q15058 1648 aa29.05■■■□□ 2.24
PKD1-227ENST00000564313 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.04■■■□□ 2.24
PKD1-227ENST00000564313 PTPRMP28827 1452 aa29■■■□□ 2.23
PKD1-227ENST00000564313 TTC37Q6PGP7 1564 aa29■■■□□ 2.23
PKD1-227ENST00000564313 PHLDB1Q86UU1 1377 aa28.99■■■□□ 2.23
PKD1-227ENST00000564313 ARAP3Q8WWN8 1544 aa28.97■■■□□ 2.23
PKD1-227ENST00000564313 ADAMTSL3P82987 1691 aa28.96■■■□□ 2.23
PKD1-227ENST00000564313 NEO1Q92859 1461 aa28.95■■■□□ 2.22
PKD1-227ENST00000564313 CFAP74Q9C0B2 1584 aa28.94■■■□□ 2.22
PKD1-227ENST00000564313 MYO5CQ9NQX4 1742 aa28.91■■■□□ 2.22
PKD1-227ENST00000564313 MTUS2Q5JR59 1369 aa28.9■■■□□ 2.22
PKD1-227ENST00000564313 PLCH2O75038 1416 aa28.9■■■□□ 2.22
PKD1-227ENST00000564313 EHBP1L1Q8N3D4 1523 aa28.89■■■□□ 2.21
PKD1-227ENST00000564313 TIAM1Q13009 1591 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 220.2 ms