RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 NISCHQ9Y2I1 1504 aa44.15■■■■■ 4.66
PKD1-227ENST00000564313 ABCC9O60706 1549 aa39.43■■■■□ 3.9
PKD1-227ENST00000564313 CCDC180Q9P1Z9 1646 aa39.28■■■■□ 3.88
PKD1-227ENST00000564313 DNAJC5BQ9UF47 199 aa37.8■■■■□ 3.64
PKD1-227ENST00000564313 RB1CC1Q8TDY2 1594 aa37.11■■■■□ 3.53
PKD1-227ENST00000564313 NACADO15069 1562 aa36.89■■■■□ 3.5
PKD1-227ENST00000564313 DCAF8L2P0C7V8 631 aa36.82■■■■□ 3.48
PKD1-227ENST00000564313 ZCCHC6Q5VYS8 1495 aaKnown RBP36.82■■■■□ 3.48
PKD1-227ENST00000564313 MYO15BQ96JP2 1530 aa36.75■■■■□ 3.47
PKD1-227ENST00000564313 DCAF1Q9Y4B6 1507 aa36.61■■■■□ 3.45
PKD1-227ENST00000564313 PABPN1Q86U42 306 aaKnown RBP eCLIP36.6■■■■□ 3.45
PKD1-227ENST00000564313 UNC13AQ9UPW8 1703 aa36.29■■■■□ 3.4
PKD1-227ENST00000564313 BICRAQ9NZM4 1560 aa36.11■■■■□ 3.37
PKD1-227ENST00000564313 SCRIBQ14160 1630 aa35.74■■■■□ 3.31
PKD1-227ENST00000564313 CECR2Q9BXF3 1484 aa35.59■■■■□ 3.29
PKD1-227ENST00000564313 CC2D2AQ9P2K1 1620 aa35.56■■■■□ 3.28
PKD1-227ENST00000564313 SHROOM4Q9ULL8 1493 aa35.49■■■■□ 3.27
PKD1-227ENST00000564313 EIF4G1Q04637 1599 aaKnown RBP35.27■■■■□ 3.24
PKD1-227ENST00000564313 DNAJC5Q9H3Z4 198 aa35.27■■■■□ 3.24
PKD1-227ENST00000564313 CUX2O14529 1486 aa34.28■■■■□ 3.08
PKD1-227ENST00000564313 BAZ1AQ9NRL2 1556 aaPredicted RBP34.26■■■■□ 3.07
PKD1-227ENST00000564313 SMARCA4P51532 1647 aa34.24■■■■□ 3.07
PKD1-227ENST00000564313 ERCC6Q03468 1493 aa34.07■■■■□ 3.04
PKD1-227ENST00000564313 SMARCA2P51531 1590 aa34.04■■■■□ 3.04
PKD1-227ENST00000564313 ATAD2BQ9ULI0 1458 aa34.01■■■■□ 3.03
PKD1-227ENST00000564313 NCAPD3P42695 1498 aa34■■■■□ 3.03
PKD1-227ENST00000564313 MROH2BQ7Z745 1585 aa33.98■■■■□ 3.03
PKD1-227ENST00000564313 PEG3Q9GZU2 1588 aa33.95■■■■□ 3.03
PKD1-227ENST00000564313 HMGXB3Q12766 1538 aa33.89■■■■□ 3.02
PKD1-227ENST00000564313 BAZ1BQ9UIG0 1483 aaKnown RBP33.76■■■□□ 2.99
PKD1-227ENST00000564313 NESP48681 1621 aa33.64■■■□□ 2.98
PKD1-227ENST00000564313 RSF1Q96T23 1441 aaPredicted RBP33.64■■■□□ 2.98
PKD1-227ENST00000564313 WIZO95785 1651 aa33.62■■■□□ 2.97
PKD1-227ENST00000564313 THOC2Q8NI27 1593 aaKnown RBP33.44■■■□□ 2.94
PKD1-227ENST00000564313 TRIM41Q8WV44 630 aa33.38■■■□□ 2.93
PKD1-227ENST00000564313 TOP2AP11388 1531 aaKnown RBP33.34■■■□□ 2.93
PKD1-227ENST00000564313 LAMC3Q9Y6N6 1575 aa33.22■■■□□ 2.91
PKD1-227ENST00000564313 KIF21AQ7Z4S6 1674 aa33.15■■■□□ 2.9
PKD1-227ENST00000564313 PDS5BQ9NTI5 1447 aa33.06■■■□□ 2.88
PKD1-227ENST00000564313 CADPSQ9ULU8 1353 aa33■■■□□ 2.87
PKD1-227ENST00000564313 CCDC88BA6NC98 1476 aa32.89■■■□□ 2.86
PKD1-227ENST00000564313 CFTRP13569 1480 aa32.84■■■□□ 2.85
PKD1-227ENST00000564313 MRC2Q9UBG0 1479 aa32.84■■■□□ 2.85
PKD1-227ENST00000564313 SUPT5HO00267 1087 aaKnown RBP32.82■■■□□ 2.84
PKD1-227ENST00000564313 WDR62O43379 1518 aa32.78■■■□□ 2.84
PKD1-227ENST00000564313 PRDM2Q13029 1718 aa32.66■■■□□ 2.82
PKD1-227ENST00000564313 FANCD2Q9BXW9 1451 aa32.61■■■□□ 2.81
PKD1-227ENST00000564313 OSCARQ8IYS5 282 aa32.6■■■□□ 2.81
PKD1-227ENST00000564313 CEP164Q9UPV0 1460 aa32.59■■■□□ 2.81
PKD1-227ENST00000564313 URB2Q14146 1524 aaKnown RBP32.31■■■□□ 2.76
PKD1-227ENST00000564313 RIMBP3CA6NJZ7 1639 aa32.28■■■□□ 2.76
PKD1-227ENST00000564313 RIMBP3BA6NNM3 1639 aa32.28■■■□□ 2.76
PKD1-227ENST00000564313 RIMBP3Q9UFD9 1639 aa32.28■■■□□ 2.76
PKD1-227ENST00000564313 ABCC8Q09428 1581 aa32.19■■■□□ 2.74
PKD1-227ENST00000564313 DNMBPQ6XZF7 1577 aa32.11■■■□□ 2.73
PKD1-227ENST00000564313 TOPBP1Q92547 1522 aa32.1■■■□□ 2.73
PKD1-227ENST00000564313 ARHGEF11O15085 1522 aa32.08■■■□□ 2.73
PKD1-227ENST00000564313 ZNF608Q9ULD9 1512 aaPredicted RBP32■■■□□ 2.71
PKD1-227ENST00000564313 CYB5RLQ6IPT4 315 aa31.93■■■□□ 2.7
PKD1-227ENST00000564313 IFT140Q96RY7 1462 aa31.92■■■□□ 2.7
PKD1-227ENST00000564313 CUX1P39880 1505 aa31.88■■■□□ 2.69
PKD1-227ENST00000564313 POLA1P09884 1462 aaPredicted RBP31.84■■■□□ 2.69
PKD1-227ENST00000564313 TRHP20396 242 aaPredicted RBP31.83■■■□□ 2.69
PKD1-227ENST00000564313 FGD5Q6ZNL6 1462 aa31.77■■■□□ 2.68
PKD1-227ENST00000564313 WRNQ14191 1432 aaPredicted RBP eCLIP31.76■■■□□ 2.68
PKD1-227ENST00000564313 EIF4G3O43432 1585 aaKnown RBP31.74■■■□□ 2.67
PKD1-227ENST00000564313 TARBP1Q13395 1621 aaKnown RBP31.74■■■□□ 2.67
PKD1-227ENST00000564313 ARAP1Q96P48 1450 aa31.72■■■□□ 2.67
PKD1-227ENST00000564313 SOGA1O94964 1423 aa31.7■■■□□ 2.67
PKD1-227ENST00000564313 BIVM-ERCC5R4GMW8 1640 aa31.7■■■□□ 2.66
PKD1-227ENST00000564313 TOP2BQ02880 1626 aa31.69■■■□□ 2.66
PKD1-227ENST00000564313 RAD54L2Q9Y4B4 1467 aa31.68■■■□□ 2.66
PKD1-227ENST00000564313 CHD1O14646 1710 aa31.66■■■□□ 2.66
PKD1-227ENST00000564313 SYNJ1O43426 1573 aa31.64■■■□□ 2.65
PKD1-227ENST00000564313 WDR97A6NE52 1622 aa31.62■■■□□ 2.65
PKD1-227ENST00000564313 AQRO60306 1485 aaKnown RBP eCLIP31.59■■■□□ 2.652e-8■■■■■ 37.7
PKD1-227ENST00000564313 FBLN2P98095 1184 aa31.55■■■□□ 2.64
PKD1-227ENST00000564313 TDRD9Q8NDG6 1382 aaKnown RBP31.53■■■□□ 2.64
PKD1-227ENST00000564313 ABCA10Q8WWZ4 1543 aa31.51■■■□□ 2.63
PKD1-227ENST00000564313 AEBP2Q6ZN18 517 aaPredicted RBP31.5■■■□□ 2.63
PKD1-227ENST00000564313 ABCA5Q8WWZ7 1642 aa31.36■■■□□ 2.61
PKD1-227ENST00000564313 GRIN2BQ13224 1484 aa31.35■■■□□ 2.61
PKD1-227ENST00000564313 GAPVD1Q14C86 1478 aa31.35■■■□□ 2.61
PKD1-227ENST00000564313 PBRM1Q86U86 1689 aa31.3■■■□□ 2.6
PKD1-227ENST00000564313 CLASP1Q7Z460 1538 aa31.29■■■□□ 2.6
PKD1-227ENST00000564313 SNAPC4Q5SXM2 1469 aa31.28■■■□□ 2.6
PKD1-227ENST00000564313 MAGI1Q96QZ7 1491 aaPredicted RBP31.28■■■□□ 2.6
PKD1-227ENST00000564313 CHMP7Q8WUX9 453 aaPredicted RBP31.17■■■□□ 2.58
PKD1-227ENST00000564313 ERICH3Q5RHP9 1530 aa31.16■■■□□ 2.58
PKD1-227ENST00000564313 SYNJ2O15056 1496 aa31.14■■■□□ 2.58
PKD1-227ENST00000564313 KIF27Q86VH2 1401 aa31.11■■■□□ 2.57
PKD1-227ENST00000564313 ADAMTS12P58397 1594 aa31.05■■■□□ 2.56
PKD1-227ENST00000564313 FHAD1B1AJZ9 1412 aa31.02■■■□□ 2.56
PKD1-227ENST00000564313 GRIN2AQ12879 1464 aa30.94■■■□□ 2.54
PKD1-227ENST00000564313 CUL7Q14999 1698 aa30.92■■■□□ 2.54
PKD1-227ENST00000564313 IGF1RP08069 1367 aa30.91■■■□□ 2.54
PKD1-227ENST00000564313 NUP160Q12769 1436 aa30.8■■■□□ 2.52
PKD1-227ENST00000564313 ERCC6L2Q5T890 1561 aa30.78■■■□□ 2.52
PKD1-227ENST00000564313 CEP170Q5SW79 1584 aa30.76■■■□□ 2.52
PKD1-227ENST00000564313 CARMIL1Q5VZK9 1371 aa30.75■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms