RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 WRNQ14191 1432 aaPredicted RBP eCLIP29.13■■■□□ 2.25
RNF40-205ENST00000563909 KDM6BO15054 1643 aa29.1■■■□□ 2.25
RNF40-205ENST00000563909 MAPKBP1O60336 1514 aa29.08■■■□□ 2.25
RNF40-205ENST00000563909 DIP2BQ9P265 1576 aa29.08■■■□□ 2.25
RNF40-205ENST00000563909 ERICH3Q5RHP9 1530 aa28.99■■■□□ 2.23
RNF40-205ENST00000563909 ADCY10Q96PN6 1610 aa28.95■■■□□ 2.23
RNF40-205ENST00000563909 TSPOAP1O95153 1857 aa28.95■■■□□ 2.22
RNF40-205ENST00000563909 RUSC2Q8N2Y8 1516 aa28.87■■■□□ 2.21
RNF40-205ENST00000563909 TOP2BQ02880 1626 aa28.87■■■□□ 2.21
RNF40-205ENST00000563909 BIVM-ERCC5R4GMW8 1640 aa28.84■■■□□ 2.21
RNF40-205ENST00000563909 ADGRL1O94910 1474 aa28.81■■■□□ 2.2
RNF40-205ENST00000563909 HECW2Q9P2P5 1572 aa28.7■■■□□ 2.18
RNF40-205ENST00000563909 KIAA0586Q9BVV6 1533 aa28.67■■■□□ 2.18
RNF40-205ENST00000563909 TTBK1Q5TCY1 1321 aaPredicted RBP28.66■■■□□ 2.18
RNF40-205ENST00000563909 PTPRGP23470 1445 aa28.64■■■□□ 2.18
RNF40-205ENST00000563909 PPRC1Q5VV67 1664 aaKnown RBP28.6■■■□□ 2.17
RNF40-205ENST00000563909 ASXL2Q76L83 1435 aa28.6■■■□□ 2.17
RNF40-205ENST00000563909 PLB1Q6P1J6 1458 aa28.57■■■□□ 2.16
RNF40-205ENST00000563909 COL17A1Q9UMD9 1497 aaPredicted RBP28.57■■■□□ 2.16
RNF40-205ENST00000563909 ABCC2Q92887 1545 aa28.57■■■□□ 2.16
RNF40-205ENST00000563909 GLI2P10070 1586 aa28.57■■■□□ 2.16
RNF40-205ENST00000563909 SUPT5HO00267 1087 aaKnown RBP28.55■■■□□ 2.16
RNF40-205ENST00000563909 IGF1RP08069 1367 aa28.48■■■□□ 2.15
RNF40-205ENST00000563909 TNIKQ9UKE5 1360 aa28.48■■■□□ 2.15
RNF40-205ENST00000563909 FBXO41Q8TF61 875 aa28.47■■■□□ 2.15
RNF40-205ENST00000563909 CARMIL2Q6F5E8 1435 aa28.43■■■□□ 2.14
RNF40-205ENST00000563909 CUL7Q14999 1698 aa28.42■■■□□ 2.14
RNF40-205ENST00000563909 TEX14Q8IWB6 1497 aa28.4■■■□□ 2.14
RNF40-205ENST00000563909 EPRSP07814 1512 aaKnown RBP28.39■■■□□ 2.14
RNF40-205ENST00000563909 UHRF1BP1LA0JNW5 1464 aa28.39■■■□□ 2.13
RNF40-205ENST00000563909 MAP3K4Q9Y6R4 1608 aa28.37■■■□□ 2.13
RNF40-205ENST00000563909 UACAQ9BZF9 1416 aa28.35■■■□□ 2.13
RNF40-205ENST00000563909 KIF27Q86VH2 1401 aa28.34■■■□□ 2.13
RNF40-205ENST00000563909 KDM5BQ9UGL1 1544 aa28.28■■■□□ 2.12
RNF40-205ENST00000563909 CARMIL1Q5VZK9 1371 aa28.25■■■□□ 2.11
RNF40-205ENST00000563909 IQGAP2Q13576 1575 aa28.23■■■□□ 2.11
RNF40-205ENST00000563909 ZCCHC11Q5TAX3 1644 aaKnown RBP28.2■■■□□ 2.1
RNF40-205ENST00000563909 DISP1Q96F81 1524 aa28.19■■■□□ 2.1
RNF40-205ENST00000563909 WDR7Q9Y4E6 1490 aa28.13■■■□□ 2.09
RNF40-205ENST00000563909 CD109Q6YHK3 1445 aa28.1■■■□□ 2.09
RNF40-205ENST00000563909 KIF21BO75037 1637 aa28.07■■■□□ 2.08
RNF40-205ENST00000563909 KCNH8Q96L42 1107 aa28.07■■■□□ 2.08
RNF40-205ENST00000563909 MAGI3Q5TCQ9 1506 aa28.07■■■□□ 2.08
RNF40-205ENST00000563909 UGGT2Q9NYU1 1516 aa28.01■■■□□ 2.07
RNF40-205ENST00000563909 CFAP43Q8NDM7 1665 aa28■■■□□ 2.07
RNF40-205ENST00000563909 PTPRMP28827 1452 aa27.99■■■□□ 2.07
RNF40-205ENST00000563909 LMTK3Q96Q04 1460 aa27.99■■■□□ 2.07
RNF40-205ENST00000563909 KIAA0556O60303 1618 aa27.97■■■□□ 2.07
RNF40-205ENST00000563909 ARAP3Q8WWN8 1544 aa27.89■■■□□ 2.06
RNF40-205ENST00000563909 ADAMTSL3P82987 1691 aa27.89■■■□□ 2.06
RNF40-205ENST00000563909 RAPGEF2Q9Y4G8 1499 aa27.86■■■□□ 2.05
RNF40-205ENST00000563909 PCF11O94913 1555 aaKnown RBP27.86■■■□□ 2.05
RNF40-205ENST00000563909 ARID4BQ4LE39 1312 aaPredicted RBP27.8■■■□□ 2.04
RNF40-205ENST00000563909 ABCA8O94911 1581 aa27.79■■■□□ 2.04
RNF40-205ENST00000563909 RAPGEF3O95398 923 aa27.79■■■□□ 2.04
RNF40-205ENST00000563909 MADDQ8WXG6 1647 aa27.74■■■□□ 2.03
RNF40-205ENST00000563909 HSPA2P54652 639 aa27.74■■■□□ 2.03
RNF40-205ENST00000563909 CERKQ8TCT0 537 aa27.74■■■□□ 2.03
RNF40-205ENST00000563909 PHLDB1Q86UU1 1377 aa27.73■■■□□ 2.03
RNF40-205ENST00000563909 ILDR2Q71H61 639 aa27.73■■■□□ 2.03
RNF40-205ENST00000563909 BCORL1Q5H9F3 1711 aa27.72■■■□□ 2.03
RNF40-205ENST00000563909 GOLGA3Q08378 1498 aa27.72■■■□□ 2.03
RNF40-205ENST00000563909 ARID3CA6NKF2 412 aa27.72■■■□□ 2.03
RNF40-205ENST00000563909 SOCS7O14512 581 aa27.71■■■□□ 2.03
RNF40-205ENST00000563909 DISP3Q9P2K9 1392 aa27.69■■■□□ 2.02
RNF40-205ENST00000563909 PLPPR3Q6T4P5 718 aa27.65■■■□□ 2.02
RNF40-205ENST00000563909 ABCA9Q8IUA7 1624 aa27.61■■■□□ 2.01
RNF40-205ENST00000563909 ATP10BO94823 1461 aa27.61■■■□□ 2.01
RNF40-205ENST00000563909 NEO1Q92859 1461 aa27.61■■■□□ 2.01
RNF40-205ENST00000563909 RIMS1Q86UR5 1692 aaKnown RBP27.61■■■□□ 2.01
RNF40-205ENST00000563909 CTTNBP2Q8WZ74 1663 aa27.61■■■□□ 2.01
RNF40-205ENST00000563909 FAM9AQ8IZU1 332 aaPredicted RBP27.59■■■□□ 2.01
RNF40-205ENST00000563909 FRMPD1Q5SYB0 1578 aa27.56■■■□□ 2
RNF40-205ENST00000563909 P3H3Q8IVL6 736 aa27.51■■□□□ 1.99
RNF40-205ENST00000563909 ARHGEF40Q8TER5 1519 aa27.47■■□□□ 1.99
RNF40-205ENST00000563909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.47■■□□□ 1.99
RNF40-205ENST00000563909 HNRNPUL2Q1KMD3 747 aaKnown RBP27.47■■□□□ 1.99
RNF40-205ENST00000563909 POGZQ7Z3K3 1410 aa27.45■■□□□ 1.98
RNF40-205ENST00000563909 DENND4BO75064 1496 aaPredicted RBP27.43■■□□□ 1.98
RNF40-205ENST00000563909 FANCAO15360 1455 aa27.41■■□□□ 1.98
RNF40-205ENST00000563909 MLECQ14165 292 aa27.4■■□□□ 1.98
RNF40-205ENST00000563909 AKNAQ7Z591 1439 aa27.39■■□□□ 1.97
RNF40-205ENST00000563909 RICTORQ6R327 1708 aa27.36■■□□□ 1.97
RNF40-205ENST00000563909 FHOD3Q2V2M9 1422 aa27.36■■□□□ 1.97
RNF40-205ENST00000563909 SPATA31D1Q6ZQQ2 1576 aa27.33■■□□□ 1.97
RNF40-205ENST00000563909 DMRT2Q9Y5R5 561 aa27.32■■□□□ 1.96
RNF40-205ENST00000563909 YEATS2Q9ULM3 1422 aa27.32■■□□□ 1.96
RNF40-205ENST00000563909 PRXQ9BXM0 1461 aa27.32■■□□□ 1.96
RNF40-205ENST00000563909 SIGLEC1Q9BZZ2 1709 aa27.31■■□□□ 1.96
RNF40-205ENST00000563909 ZFYVE16Q7Z3T8 1539 aa27.3■■□□□ 1.96
RNF40-205ENST00000563909 RAPGEF6Q8TEU7 1601 aa27.3■■□□□ 1.96
RNF40-205ENST00000563909 TTC37Q6PGP7 1564 aa27.27■■□□□ 1.96
RNF40-205ENST00000563909 FER1L4A9Z1Z3 1794 aa27.27■■□□□ 1.96
RNF40-205ENST00000563909 ZMYM4Q5VZL5 1548 aa27.26■■□□□ 1.96
RNF40-205ENST00000563909 EFCAB5A4FU69 1503 aa27.26■■□□□ 1.95
RNF40-205ENST00000563909 PLEKHD1A6NEE1 506 aa27.25■■□□□ 1.95
RNF40-205ENST00000563909 CEBPAP49715 358 aaPredicted RBP27.24■■□□□ 1.95
RNF40-205ENST00000563909 NUP153P49790 1475 aaKnown RBP27.23■■□□□ 1.95
RNF40-205ENST00000563909 MAGI2Q86UL8 1455 aa27.23■■□□□ 1.95
RNF40-205ENST00000563909 CFAP74Q9C0B2 1584 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms