RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 KIAA0586Q9BVV6 1533 aa34.21■■■■□ 3.07
CMTM3-206ENST00000563672 CHIC1Q5VXU3 224 aa34.19■■■■□ 3.06
CMTM3-206ENST00000563672 ERCC6L2Q5T890 1561 aa34.19■■■■□ 3.06
CMTM3-206ENST00000563672 RAPGEF2Q9Y4G8 1499 aa34.18■■■■□ 3.06
CMTM3-206ENST00000563672 PRG4Q92954 1404 aaPredicted RBP34.13■■■■□ 3.05
CMTM3-206ENST00000563672 PRXQ9BXM0 1461 aa34.07■■■■□ 3.05
CMTM3-206ENST00000563672 CSRNP3Q8WYN3 585 aa34.04■■■■□ 3.04
CMTM3-206ENST00000563672 EEA1Q15075 1411 aa34.02■■■■□ 3.04
CMTM3-206ENST00000563672 IQGAP2Q13576 1575 aa33.94■■■■□ 3.02
CMTM3-206ENST00000563672 FAM9AQ8IZU1 332 aaPredicted RBP33.87■■■■□ 3.01
CMTM3-206ENST00000563672 CARMIL2Q6F5E8 1435 aa33.82■■■■□ 3
CMTM3-206ENST00000563672 UGGT2Q9NYU1 1516 aa33.81■■■■□ 3
CMTM3-206ENST00000563672 DISP1Q96F81 1524 aa33.78■■■■□ 3
CMTM3-206ENST00000563672 CTTNBP2Q8WZ74 1663 aa33.74■■■□□ 2.99
CMTM3-206ENST00000563672 TNIKQ9UKE5 1360 aa33.74■■■□□ 2.99
CMTM3-206ENST00000563672 PTPRGP23470 1445 aa33.73■■■□□ 2.99
CMTM3-206ENST00000563672 TRHP20396 242 aaPredicted RBP33.64■■■□□ 2.98
CMTM3-206ENST00000563672 KIAA0556O60303 1618 aa33.63■■■□□ 2.97
CMTM3-206ENST00000563672 KIF21BO75037 1637 aa33.63■■■□□ 2.97
CMTM3-206ENST00000563672 TTBK1Q5TCY1 1321 aaPredicted RBP33.61■■■□□ 2.97
CMTM3-206ENST00000563672 GOLGA3Q08378 1498 aa33.6■■■□□ 2.97
CMTM3-206ENST00000563672 ADCY10Q96PN6 1610 aa33.58■■■□□ 2.97
CMTM3-206ENST00000563672 NPM1P06748 294 aaKnown RBP eCLIP33.54■■■□□ 2.96
CMTM3-206ENST00000563672 UACAQ9BZF9 1416 aa33.5■■■□□ 2.95
CMTM3-206ENST00000563672 UHRF1BP1LA0JNW5 1464 aa33.48■■■□□ 2.95
CMTM3-206ENST00000563672 ABCC2Q92887 1545 aa33.42■■■□□ 2.94
CMTM3-206ENST00000563672 MAPKBP1O60336 1514 aa33.41■■■□□ 2.94
CMTM3-206ENST00000563672 UBTFP17480 764 aaKnown RBP33.4■■■□□ 2.94
CMTM3-206ENST00000563672 P3H3Q8IVL6 736 aa33.4■■■□□ 2.94
CMTM3-206ENST00000563672 EHMT2Q96KQ7 1210 aa33.4■■■□□ 2.94
CMTM3-206ENST00000563672 SAMD9Q5K651 1589 aa33.39■■■□□ 2.94
CMTM3-206ENST00000563672 PLB1Q6P1J6 1458 aa33.35■■■□□ 2.93
CMTM3-206ENST00000563672 RANGAP1P46060 587 aaPredicted RBP33.34■■■□□ 2.93
CMTM3-206ENST00000563672 KDM5BQ9UGL1 1544 aa33.31■■■□□ 2.92
CMTM3-206ENST00000563672 ABCA8O94911 1581 aa33.3■■■□□ 2.92
CMTM3-206ENST00000563672 ABCC10Q5T3U5 1492 aa33.29■■■□□ 2.92
CMTM3-206ENST00000563672 FAM69CQ0P6D2 419 aa33.23■■■□□ 2.91
CMTM3-206ENST00000563672 EFCAB5A4FU69 1503 aa33.23■■■□□ 2.91
CMTM3-206ENST00000563672 ASXL2Q76L83 1435 aa33.22■■■□□ 2.91
CMTM3-206ENST00000563672 FHOD3Q2V2M9 1422 aa33.21■■■□□ 2.91
CMTM3-206ENST00000563672 KIF13AQ9H1H9 1805 aa33.19■■■□□ 2.9
CMTM3-206ENST00000563672 DIP2BQ9P265 1576 aa33.18■■■□□ 2.9
CMTM3-206ENST00000563672 ZCCHC11Q5TAX3 1644 aaKnown RBP33.17■■■□□ 2.9
CMTM3-206ENST00000563672 ARHGAP35Q9NRY4 1499 aa33.09■■■□□ 2.89
CMTM3-206ENST00000563672 RAPGEF6Q8TEU7 1601 aa33.06■■■□□ 2.88
CMTM3-206ENST00000563672 ATP10BO94823 1461 aa33.05■■■□□ 2.88
CMTM3-206ENST00000563672 WDR7Q9Y4E6 1490 aa33.03■■■□□ 2.88
CMTM3-206ENST00000563672 EPRSP07814 1512 aaKnown RBP33.02■■■□□ 2.88
CMTM3-206ENST00000563672 GLI2P10070 1586 aa33.02■■■□□ 2.88
CMTM3-206ENST00000563672 ARID3CA6NKF2 412 aa33.02■■■□□ 2.88
CMTM3-206ENST00000563672 NUP153P49790 1475 aaKnown RBP33■■■□□ 2.87
CMTM3-206ENST00000563672 FMN1Q68DA7 1419 aa32.95■■■□□ 2.87
CMTM3-206ENST00000563672 KCNH8Q96L42 1107 aa32.9■■■□□ 2.86
CMTM3-206ENST00000563672 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.87■■■□□ 2.85
CMTM3-206ENST00000563672 HNRNPUL2Q1KMD3 747 aaKnown RBP32.87■■■□□ 2.85
CMTM3-206ENST00000563672 CLIP1P30622 1438 aa32.86■■■□□ 2.85
CMTM3-206ENST00000563672 MAP3K4Q9Y6R4 1608 aa32.83■■■□□ 2.85
CMTM3-206ENST00000563672 TSPOAP1O95153 1857 aa32.82■■■□□ 2.85
CMTM3-206ENST00000563672 LOC105371045A0A1W2PR82 267 aa32.79■■■□□ 2.84
CMTM3-206ENST00000563672 PPRC1Q5VV67 1664 aaKnown RBP32.78■■■□□ 2.84
CMTM3-206ENST00000563672 PLEKHD1A6NEE1 506 aa32.77■■■□□ 2.84
CMTM3-206ENST00000563672 ATP1B4Q9UN42 357 aaPredicted RBP32.76■■■□□ 2.83
CMTM3-206ENST00000563672 CD109Q6YHK3 1445 aa32.75■■■□□ 2.83
CMTM3-206ENST00000563672 HECW1Q76N89 1606 aa32.74■■■□□ 2.83
CMTM3-206ENST00000563672 CDK13Q14004 1512 aaKnown RBP32.73■■■□□ 2.83
CMTM3-206ENST00000563672 CFAP43Q8NDM7 1665 aa32.71■■■□□ 2.83
CMTM3-206ENST00000563672 CASKIN1Q8WXD9 1431 aa32.7■■■□□ 2.83
CMTM3-206ENST00000563672 TEX14Q8IWB6 1497 aa32.7■■■□□ 2.83
CMTM3-206ENST00000563672 MAGI3Q5TCQ9 1506 aa32.7■■■□□ 2.83
CMTM3-206ENST00000563672 CEP162Q5TB80 1403 aa32.69■■■□□ 2.82
CMTM3-206ENST00000563672 KDM6BO15054 1643 aa32.65■■■□□ 2.82
CMTM3-206ENST00000563672 ABCA9Q8IUA7 1624 aa32.65■■■□□ 2.82
CMTM3-206ENST00000563672 PCF11O94913 1555 aaKnown RBP32.62■■■□□ 2.81
CMTM3-206ENST00000563672 CDK11AQ9UQ88 783 aaPredicted RBP32.61■■■□□ 2.81
CMTM3-206ENST00000563672 FYCO1Q9BQS8 1478 aa32.59■■■□□ 2.81
CMTM3-206ENST00000563672 COL17A1Q9UMD9 1497 aaPredicted RBP32.58■■■□□ 2.81
CMTM3-206ENST00000563672 CCDC18Q5T9S5 1454 aa32.54■■■□□ 2.8
CMTM3-206ENST00000563672 LRRIQ1Q96JM4 1722 aa32.54■■■□□ 2.8
CMTM3-206ENST00000563672 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.51■■■□□ 2.83e-7■■■■■ 59
CMTM3-206ENST00000563672 TROQ12816 1431 aaPredicted RBP32.51■■■□□ 2.79
CMTM3-206ENST00000563672 PHLDB1Q86UU1 1377 aa32.46■■■□□ 2.79
CMTM3-206ENST00000563672 TTC37Q6PGP7 1564 aa32.45■■■□□ 2.78
CMTM3-206ENST00000563672 NEO1Q92859 1461 aa32.43■■■□□ 2.78
CMTM3-206ENST00000563672 ARAP3Q8WWN8 1544 aa32.41■■■□□ 2.78
CMTM3-206ENST00000563672 PLCH2O75038 1416 aa32.37■■■□□ 2.77
CMTM3-206ENST00000563672 KIF14Q15058 1648 aa32.37■■■□□ 2.77
CMTM3-206ENST00000563672 FANCAO15360 1455 aa32.34■■■□□ 2.77
CMTM3-206ENST00000563672 AKNAQ7Z591 1439 aa32.31■■■□□ 2.76
CMTM3-206ENST00000563672 VPS8Q8N3P4 1428 aa32.31■■■□□ 2.76
CMTM3-206ENST00000563672 RAPGEF3O95398 923 aa32.26■■■□□ 2.75
CMTM3-206ENST00000563672 CFAP74Q9C0B2 1584 aa32.25■■■□□ 2.75
CMTM3-206ENST00000563672 EFCAB2Q5VUJ9 269 aa32.25■■■□□ 2.75
CMTM3-206ENST00000563672 MYO5CQ9NQX4 1742 aa32.22■■■□□ 2.75
CMTM3-206ENST00000563672 MTUS2Q5JR59 1369 aa32.21■■■□□ 2.75
CMTM3-206ENST00000563672 DENND4BO75064 1496 aaPredicted RBP32.2■■■□□ 2.75
CMTM3-206ENST00000563672 ADGRL1O94910 1474 aa32.16■■■□□ 2.74
CMTM3-206ENST00000563672 FRMPD1Q5SYB0 1578 aa32.15■■■□□ 2.74
CMTM3-206ENST00000563672 ARHGAP5Q13017 1502 aa32.15■■■□□ 2.74
CMTM3-206ENST00000563672 SCAPERQ9BY12 1400 aa32.14■■■□□ 2.74
CMTM3-206ENST00000563672 EHBP1L1Q8N3D4 1523 aa32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms