RNA–Protein interactions for RNA: ENST00000563383.1

CX3CL1-202, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 5 BASIC

Gene CX3CL1, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-202ENST00000563383 FBLN2P98095 1184 aa14.71□□□□□ -0.05
CX3CL1-202ENST00000563383 NEFLP07196 543 aa14.71□□□□□ -0.06
CX3CL1-202ENST00000563383 DDX10Q13206 875 aaKnown RBP14.71□□□□□ -0.06
CX3CL1-202ENST00000563383 CARMIL1Q5VZK9 1371 aa14.7□□□□□ -0.06
CX3CL1-202ENST00000563383 TRIM52Q96A61 297 aa14.69□□□□□ -0.06
CX3CL1-202ENST00000563383 VPS8Q8N3P4 1428 aa14.68□□□□□ -0.06
CX3CL1-202ENST00000563383 IGF1RP08069 1367 aa14.66□□□□□ -0.06
CX3CL1-202ENST00000563383 KIF21BO75037 1637 aa14.62□□□□□ -0.07
CX3CL1-202ENST00000563383 ARAP1Q96P48 1450 aa14.59□□□□□ -0.07
CX3CL1-202ENST00000563383 PRXQ9BXM0 1461 aa14.58□□□□□ -0.07
CX3CL1-202ENST00000563383 IRX6P78412 446 aaPredicted RBP14.58□□□□□ -0.07
CX3CL1-202ENST00000563383 BIVM-ERCC5R4GMW8 1640 aa14.56□□□□□ -0.08
CX3CL1-202ENST00000563383 CLSPNQ9HAW4 1339 aa14.55□□□□□ -0.08
CX3CL1-202ENST00000563383 FHOD3Q2V2M9 1422 aa14.55□□□□□ -0.08
CX3CL1-202ENST00000563383 SIN3AQ96ST3 1273 aa14.54□□□□□ -0.08
CX3CL1-202ENST00000563383 DHX57Q6P158 1386 aaKnown RBP14.54□□□□□ -0.08
CX3CL1-202ENST00000563383 RBM19Q9Y4C8 960 aaKnown RBP14.53□□□□□ -0.08
CX3CL1-202ENST00000563383 POLA1P09884 1462 aaPredicted RBP14.53□□□□□ -0.08
CX3CL1-202ENST00000563383 TOPBP1Q92547 1522 aa14.52□□□□□ -0.09
CX3CL1-202ENST00000563383 ARHGAP35Q9NRY4 1499 aa14.5□□□□□ -0.09
CX3CL1-202ENST00000563383 CNGB1Q14028 1251 aaPredicted RBP14.5□□□□□ -0.09
CX3CL1-202ENST00000563383 PDS5BQ9NTI5 1447 aa14.49□□□□□ -0.09
CX3CL1-202ENST00000563383 AQRO60306 1485 aaKnown RBP eCLIP14.47□□□□□ -0.092e-7■■■■■ 27.7
CX3CL1-202ENST00000563383 ANP32CO43423 234 aa14.46□□□□□ -0.09
CX3CL1-202ENST00000563383 CHIC2Q9UKJ5 165 aa14.46□□□□□ -0.09
CX3CL1-202ENST00000563383 URB2Q14146 1524 aaKnown RBP14.45□□□□□ -0.1
CX3CL1-202ENST00000563383 ERCC6Q03468 1493 aa14.44□□□□□ -0.1
CX3CL1-202ENST00000563383 ANO8Q9HCE9 1232 aaPredicted RBP14.43□□□□□ -0.1
CX3CL1-202ENST00000563383 ERICH3Q5RHP9 1530 aa14.43□□□□□ -0.1
CX3CL1-202ENST00000563383 CCNB3Q8WWL7 1395 aa14.4□□□□□ -0.1
CX3CL1-202ENST00000563383 HNRNPUQ00839 825 aaKnown RBP eCLIP14.4□□□□□ -0.11
CX3CL1-202ENST00000563383 MTUS2Q5JR59 1369 aa14.39□□□□□ -0.11
CX3CL1-202ENST00000563383 CHMP7Q8WUX9 453 aaPredicted RBP14.39□□□□□ -0.11
CX3CL1-202ENST00000563383 GAPVD1Q14C86 1478 aa14.39□□□□□ -0.11
CX3CL1-202ENST00000563383 DNMBPQ6XZF7 1577 aa14.39□□□□□ -0.11
CX3CL1-202ENST00000563383 CDK11AQ9UQ88 783 aaPredicted RBP14.37□□□□□ -0.11
CX3CL1-202ENST00000563383 RRP7BPQ9NSQ0 103 aa14.35□□□□□ -0.11
CX3CL1-202ENST00000563383 ZNF777Q9ULD5 760 aaPredicted RBP14.35□□□□□ -0.11
CX3CL1-202ENST00000563383 PHLDB1Q86UU1 1377 aa14.34□□□□□ -0.11
CX3CL1-202ENST00000563383 SENP3-EIF4A1A0A087X0R7 540 aa14.34□□□□□ -0.11
CX3CL1-202ENST00000563383 RAB3GAP2Q9H2M9 1393 aa14.32□□□□□ -0.12
CX3CL1-202ENST00000563383 ABCA10Q8WWZ4 1543 aa14.31□□□□□ -0.12
CX3CL1-202ENST00000563383 KIF21AQ7Z4S6 1674 aa14.31□□□□□ -0.12
CX3CL1-202ENST00000563383 MSH5O43196 834 aa14.3□□□□□ -0.12
CX3CL1-202ENST00000563383 ZNF608Q9ULD9 1512 aaPredicted RBP14.3□□□□□ -0.12
CX3CL1-202ENST00000563383 LAMC3Q9Y6N6 1575 aa14.29□□□□□ -0.12
CX3CL1-202ENST00000563383 NBR1Q14596 966 aa14.29□□□□□ -0.12
CX3CL1-202ENST00000563383 FHAD1B1AJZ9 1412 aa14.29□□□□□ -0.12
CX3CL1-202ENST00000563383 PRDM2Q13029 1718 aa14.28□□□□□ -0.12
CX3CL1-202ENST00000563383 FAM9BQ8IZU0 186 aa14.26□□□□□ -0.13
CX3CL1-202ENST00000563383 POLR3GLQ9BT43 218 aa14.26□□□□□ -0.13
CX3CL1-202ENST00000563383 CCDC136Q96JN2 1154 aa14.23□□□□□ -0.13
CX3CL1-202ENST00000563383 PCF11O94913 1555 aaKnown RBP14.23□□□□□ -0.13
CX3CL1-202ENST00000563383 LRRC9Q6ZRR7 1453 aa14.23□□□□□ -0.13
CX3CL1-202ENST00000563383 B4GALNT3Q6L9W6 998 aa14.23□□□□□ -0.13
CX3CL1-202ENST00000563383 PPP1R15AO75807 674 aaPredicted RBP14.22□□□□□ -0.13
CX3CL1-202ENST00000563383 FOXD1Q16676 465 aa14.21□□□□□ -0.13
CX3CL1-202ENST00000563383 DEKP35659 375 aaKnown RBP14.2□□□□□ -0.14
CX3CL1-202ENST00000563383 SALL2Q9Y467 1007 aaPredicted RBP14.2□□□□□ -0.14
CX3CL1-202ENST00000563383 TONSLQ96HA7 1378 aa14.2□□□□□ -0.14
CX3CL1-202ENST00000563383 MRC2Q9UBG0 1479 aa14.2□□□□□ -0.14
CX3CL1-202ENST00000563383 TIAM1Q13009 1591 aa14.19□□□□□ -0.14
CX3CL1-202ENST00000563383 FMN1Q68DA7 1419 aa14.18□□□□□ -0.14
CX3CL1-202ENST00000563383 ZNF644Q9H582 1327 aaPredicted RBP14.16□□□□□ -0.14
CX3CL1-202ENST00000563383 SETD5Q9C0A6 1442 aa14.16□□□□□ -0.14
CX3CL1-202ENST00000563383 RRBP1Q9P2E9 1410 aaKnown RBP14.16□□□□□ -0.14
CX3CL1-202ENST00000563383 CCER2I3L3R5 266 aa14.15□□□□□ -0.14
CX3CL1-202ENST00000563383 ZNF326Q5BKZ1 582 aaKnown RBP14.15□□□□□ -0.14
CX3CL1-202ENST00000563383 SNAPC4Q5SXM2 1469 aa14.14□□□□□ -0.15
CX3CL1-202ENST00000563383 WDR97A6NE52 1622 aa14.12□□□□□ -0.15
CX3CL1-202ENST00000563383 CASKIN1Q8WXD9 1431 aa14.12□□□□□ -0.15
CX3CL1-202ENST00000563383 JPH4Q96JJ6 628 aa14.12□□□□□ -0.15
CX3CL1-202ENST00000563383 GRIN2BQ13224 1484 aa14.11□□□□□ -0.15
CX3CL1-202ENST00000563383 CDK13Q14004 1512 aaKnown RBP14.11□□□□□ -0.15
CX3CL1-202ENST00000563383 MRS2Q9HD23 443 aa14.1□□□□□ -0.15
CX3CL1-202ENST00000563383 NPM2Q86SE8 214 aaKnown RBP14.09□□□□□ -0.15
CX3CL1-202ENST00000563383 MYT1LQ9UL68 1186 aa14.09□□□□□ -0.15
CX3CL1-202ENST00000563383 CUL7Q14999 1698 aa14.09□□□□□ -0.15
CX3CL1-202ENST00000563383 CCDC184Q52MB2 194 aa14.08□□□□□ -0.16
CX3CL1-202ENST00000563383 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.08□□□□□ -0.16
CX3CL1-202ENST00000563383 FYCO1Q9BQS8 1478 aa14.07□□□□□ -0.16
CX3CL1-202ENST00000563383 CFDP1Q9UEE9 299 aaPredicted RBP14.07□□□□□ -0.16
CX3CL1-202ENST00000563383 FGD6Q6ZV73 1430 aa14.07□□□□□ -0.16
CX3CL1-202ENST00000563383 PPP4R2Q9NY27 417 aa14.06□□□□□ -0.16
CX3CL1-202ENST00000563383 NCOA2Q15596 1464 aa14.06□□□□□ -0.16
CX3CL1-202ENST00000563383 ABCA5Q8WWZ7 1642 aa14.05□□□□□ -0.16
CX3CL1-202ENST00000563383 RTN4Q9NQC3 1192 aaKnown RBP14.05□□□□□ -0.16
CX3CL1-202ENST00000563383 RTL5Q5HYW3 569 aaPredicted RBP14.05□□□□□ -0.16
CX3CL1-202ENST00000563383 UBE2Q2Q8WVN8 375 aa14.04□□□□□ -0.16
CX3CL1-202ENST00000563383 TARBP1Q13395 1621 aaKnown RBP14.04□□□□□ -0.16
CX3CL1-202ENST00000563383 CTTNBP2Q8WZ74 1663 aa14.04□□□□□ -0.16
CX3CL1-202ENST00000563383 IFT140Q96RY7 1462 aa14.03□□□□□ -0.16
CX3CL1-202ENST00000563383 HSPA5P11021 654 aaKnown RBP14.03□□□□□ -0.16
CX3CL1-202ENST00000563383 FANCIQ9NVI1 1328 aa14.03□□□□□ -0.16
CX3CL1-202ENST00000563383 EFCAB5A4FU69 1503 aa14.02□□□□□ -0.16
CX3CL1-202ENST00000563383 PLEKHD1A6NEE1 506 aa14.02□□□□□ -0.17
CX3CL1-202ENST00000563383 PTPRKQ15262 1439 aa14.02□□□□□ -0.17
CX3CL1-202ENST00000563383 PAK3O75914 559 aaPredicted RBP14.01□□□□□ -0.17
CX3CL1-202ENST00000563383 IQGAP2Q13576 1575 aa14.01□□□□□ -0.17
CX3CL1-202ENST00000563383 NOP58Q9Y2X3 529 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms