RNA–Protein interactions for RNA: ENST00000563383.1

CX3CL1-202, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 5 BASIC

Gene CX3CL1, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-202ENST00000563383 NISCHQ9Y2I1 1504 aa20.33■□□□□ 0.85
CX3CL1-202ENST00000563383 DCAF8L2P0C7V8 631 aa18.13■□□□□ 0.49
CX3CL1-202ENST00000563383 SHROOM4Q9ULL8 1493 aa18.03■□□□□ 0.48
CX3CL1-202ENST00000563383 SUPT5HO00267 1087 aaKnown RBP17.59■□□□□ 0.41
CX3CL1-202ENST00000563383 PCGF6Q9BYE7 350 aa17.13■□□□□ 0.33
CX3CL1-202ENST00000563383 CCDC180Q9P1Z9 1646 aa17.06■□□□□ 0.32
CX3CL1-202ENST00000563383 ZCCHC6Q5VYS8 1495 aaKnown RBP17.04■□□□□ 0.32
CX3CL1-202ENST00000563383 HRCP23327 699 aa17.03■□□□□ 0.32
CX3CL1-202ENST00000563383 PPARGC1BQ86YN6 1023 aaKnown RBP17.03■□□□□ 0.32
CX3CL1-202ENST00000563383 PELP1Q8IZL8 1130 aaKnown RBP16.95■□□□□ 0.3
CX3CL1-202ENST00000563383 ABCC9O60706 1549 aa16.91■□□□□ 0.3
CX3CL1-202ENST00000563383 CHIC1Q5VXU3 224 aa16.76■□□□□ 0.27
CX3CL1-202ENST00000563383 LOC105371045A0A1W2PR82 267 aa16.67■□□□□ 0.26
CX3CL1-202ENST00000563383 EHMT2Q96KQ7 1210 aa16.62■□□□□ 0.25
CX3CL1-202ENST00000563383 MYO15BQ96JP2 1530 aa16.61■□□□□ 0.25
CX3CL1-202ENST00000563383 SCRIBQ14160 1630 aa16.57■□□□□ 0.24
CX3CL1-202ENST00000563383 MYT1Q01538 1121 aa16.45■□□□□ 0.22
CX3CL1-202ENST00000563383 FAM9AQ8IZU1 332 aaPredicted RBP16.42■□□□□ 0.22
CX3CL1-202ENST00000563383 PABPN1Q86U42 306 aaKnown RBP eCLIP16.38■□□□□ 0.21
CX3CL1-202ENST00000563383 TRIM26Q12899 539 aaPredicted RBP16.31■□□□□ 0.2
CX3CL1-202ENST00000563383 DCAF1Q9Y4B6 1507 aa16.29■□□□□ 0.2
CX3CL1-202ENST00000563383 TRIM41Q8WV44 630 aa16.17■□□□□ 0.18
CX3CL1-202ENST00000563383 CECR2Q9BXF3 1484 aa16.15■□□□□ 0.18
CX3CL1-202ENST00000563383 RSF1Q96T23 1441 aaPredicted RBP16.12■□□□□ 0.17
CX3CL1-202ENST00000563383 SCAF1Q9H7N4 1312 aaKnown RBP16.12■□□□□ 0.17
CX3CL1-202ENST00000563383 TTBK1Q5TCY1 1321 aaPredicted RBP16.07■□□□□ 0.16
CX3CL1-202ENST00000563383 ZEB1P37275 1124 aaPredicted RBP16.05■□□□□ 0.16
CX3CL1-202ENST00000563383 NACADO15069 1562 aa16.04■□□□□ 0.16
CX3CL1-202ENST00000563383 RB1CC1Q8TDY2 1594 aa15.97■□□□□ 0.15
CX3CL1-202ENST00000563383 MROH2BQ7Z745 1585 aa15.95■□□□□ 0.14
CX3CL1-202ENST00000563383 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.93■□□□□ 0.14
CX3CL1-202ENST00000563383 CCER1Q8TC90 406 aaPredicted RBP15.91■□□□□ 0.14
CX3CL1-202ENST00000563383 WIZO95785 1651 aa15.84■□□□□ 0.13
CX3CL1-202ENST00000563383 NEUROD1Q13562 356 aa15.81■□□□□ 0.12
CX3CL1-202ENST00000563383 RANGAP1P46060 587 aaPredicted RBP15.81■□□□□ 0.12
CX3CL1-202ENST00000563383 GTF3C3Q9Y5Q9 886 aa15.8■□□□□ 0.12
CX3CL1-202ENST00000563383 YTHDC1Q96MU7 727 aaKnown RBP15.79■□□□□ 0.12
CX3CL1-202ENST00000563383 ACIN1Q9UKV3 1341 aaKnown RBP15.75■□□□□ 0.11
CX3CL1-202ENST00000563383 CENPBP07199 599 aaPredicted RBP15.71■□□□□ 0.11
CX3CL1-202ENST00000563383 DIEXFQ68CQ4 756 aaKnown RBP15.7■□□□□ 0.1
CX3CL1-202ENST00000563383 BAZ1AQ9NRL2 1556 aaPredicted RBP15.63■□□□□ 0.09
CX3CL1-202ENST00000563383 UBTFP17480 764 aaKnown RBP15.61■□□□□ 0.09
CX3CL1-202ENST00000563383 UNC13AQ9UPW8 1703 aa15.57■□□□□ 0.08
CX3CL1-202ENST00000563383 ABCC8Q09428 1581 aa15.56■□□□□ 0.08
CX3CL1-202ENST00000563383 CCDC88BA6NC98 1476 aa15.54■□□□□ 0.08
CX3CL1-202ENST00000563383 SMARCA4P51532 1647 aa15.52■□□□□ 0.07
CX3CL1-202ENST00000563383 BICRAQ9NZM4 1560 aa15.46■□□□□ 0.07
CX3CL1-202ENST00000563383 BCL11AQ9H165 835 aa15.4■□□□□ 0.06
CX3CL1-202ENST00000563383 HNRNPUL2Q1KMD3 747 aaKnown RBP15.4■□□□□ 0.06
CX3CL1-202ENST00000563383 TOP2AP11388 1531 aaKnown RBP15.4■□□□□ 0.06
CX3CL1-202ENST00000563383 SOGA1O94964 1423 aa15.39■□□□□ 0.05
CX3CL1-202ENST00000563383 BAZ1BQ9UIG0 1483 aaKnown RBP15.38■□□□□ 0.05
CX3CL1-202ENST00000563383 SMARCA2P51531 1590 aa15.35■□□□□ 0.05
CX3CL1-202ENST00000563383 CSRNP3Q8WYN3 585 aa15.34■□□□□ 0.05
CX3CL1-202ENST00000563383 ZNF316A6NFI3 1004 aaPredicted RBP15.33■□□□□ 0.05
CX3CL1-202ENST00000563383 RUSC2Q8N2Y8 1516 aa15.33■□□□□ 0.04
CX3CL1-202ENST00000563383 MIER1Q8N108 512 aa15.31■□□□□ 0.04
CX3CL1-202ENST00000563383 ATAD2BQ9ULI0 1458 aa15.31■□□□□ 0.04
CX3CL1-202ENST00000563383 WRNQ14191 1432 aaPredicted RBP eCLIP15.26■□□□□ 0.03
CX3CL1-202ENST00000563383 PRKCSHP14314 528 aaPredicted RBP15.19■□□□□ 0.02
CX3CL1-202ENST00000563383 APLP2Q06481 763 aa15.18■□□□□ 0.02
CX3CL1-202ENST00000563383 ATP1B4Q9UN42 357 aaPredicted RBP15.17■□□□□ 0.02
CX3CL1-202ENST00000563383 CEP162Q5TB80 1403 aa15.12■□□□□ 0.01
CX3CL1-202ENST00000563383 EIF4G1Q04637 1599 aaKnown RBP15.11■□□□□ 0.01
CX3CL1-202ENST00000563383 DNAJC5BQ9UF47 199 aa15.1■□□□□ 0.01
CX3CL1-202ENST00000563383 P3H3Q8IVL6 736 aa15.07■□□□□ 0
CX3CL1-202ENST00000563383 BCANQ96GW7 911 aa15.06■□□□□ 0
CX3CL1-202ENST00000563383 ITGAEP38570 1179 aa15.05■□□□□ 0
CX3CL1-202ENST00000563383 SYNJ1O43426 1573 aa15.05■□□□□ 0
CX3CL1-202ENST00000563383 ANP32EQ9BTT0 268 aa15□□□□□ -0.01
CX3CL1-202ENST00000563383 GOLGA3Q08378 1498 aa14.97□□□□□ -0.01
CX3CL1-202ENST00000563383 TNIKQ9UKE5 1360 aa14.97□□□□□ -0.01
CX3CL1-202ENST00000563383 RAPGEF2Q9Y4G8 1499 aa14.96□□□□□ -0.01
CX3CL1-202ENST00000563383 CLIP1P30622 1438 aa14.95□□□□□ -0.02
CX3CL1-202ENST00000563383 NCAPD3P42695 1498 aa14.93□□□□□ -0.02
CX3CL1-202ENST00000563383 PEG3Q9GZU2 1588 aa14.92□□□□□ -0.02
CX3CL1-202ENST00000563383 SUPT16HQ9Y5B9 1047 aaKnown RBP14.91□□□□□ -0.02
CX3CL1-202ENST00000563383 EEA1Q15075 1411 aa14.89□□□□□ -0.03
CX3CL1-202ENST00000563383 NESP48681 1621 aa14.88□□□□□ -0.03
CX3CL1-202ENST00000563383 CEP164Q9UPV0 1460 aa14.88□□□□□ -0.03
CX3CL1-202ENST00000563383 CC2D2AQ9P2K1 1620 aa14.87□□□□□ -0.03
CX3CL1-202ENST00000563383 ARID3CA6NKF2 412 aa14.87□□□□□ -0.03
CX3CL1-202ENST00000563383 ERICH6Q7L0X2 663 aa14.85□□□□□ -0.03
CX3CL1-202ENST00000563383 CUX2O14529 1486 aa14.85□□□□□ -0.03
CX3CL1-202ENST00000563383 CADPSQ9ULU8 1353 aa14.85□□□□□ -0.03
CX3CL1-202ENST00000563383 CUX1P39880 1505 aa14.81□□□□□ -0.04
CX3CL1-202ENST00000563383 KCNH8Q96L42 1107 aa14.81□□□□□ -0.04
CX3CL1-202ENST00000563383 KIF27Q86VH2 1401 aa14.81□□□□□ -0.04
CX3CL1-202ENST00000563383 KANK4Q5T7N3 995 aaPredicted RBP14.8□□□□□ -0.04
CX3CL1-202ENST00000563383 TSHZ2Q9NRE2 1034 aa14.79□□□□□ -0.04
CX3CL1-202ENST00000563383 CFTRP13569 1480 aa14.78□□□□□ -0.04
CX3CL1-202ENST00000563383 FKBP8Q14318 412 aa14.77□□□□□ -0.04
CX3CL1-202ENST00000563383 HMGXB3Q12766 1538 aa14.77□□□□□ -0.05
CX3CL1-202ENST00000563383 RAD54L2Q9Y4B4 1467 aa14.75□□□□□ -0.05
CX3CL1-202ENST00000563383 TDRD9Q8NDG6 1382 aaKnown RBP14.74□□□□□ -0.05
CX3CL1-202ENST00000563383 HIRIP3Q9BW71 556 aaPredicted RBP14.74□□□□□ -0.05
CX3CL1-202ENST00000563383 FANCD2Q9BXW9 1451 aa14.73□□□□□ -0.05
CX3CL1-202ENST00000563383 TOP2BQ02880 1626 aa14.73□□□□□ -0.05
CX3CL1-202ENST00000563383 FAM50AQ14320 339 aaKnown RBP14.73□□□□□ -0.05
CX3CL1-202ENST00000563383 FGD5Q6ZNL6 1462 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms