RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 CARMIL1Q5VZK9 1371 aa26.16■■□□□ 1.78
LPCAT4-204ENST00000563240 RUSC2Q8N2Y8 1516 aa26.14■■□□□ 1.77
LPCAT4-204ENST00000563240 CUL7Q14999 1698 aa26.12■■□□□ 1.77
LPCAT4-204ENST00000563240 KIAA0586Q9BVV6 1533 aa26.09■■□□□ 1.77
LPCAT4-204ENST00000563240 TTBK1Q5TCY1 1321 aaPredicted RBP26■■□□□ 1.75
LPCAT4-204ENST00000563240 NPM1P06748 294 aaKnown RBP eCLIP25.92■■□□□ 1.74
LPCAT4-204ENST00000563240 RAPGEF2Q9Y4G8 1499 aa25.91■■□□□ 1.74
LPCAT4-204ENST00000563240 PTPRGP23470 1445 aa25.86■■□□□ 1.73
LPCAT4-204ENST00000563240 CARMIL2Q6F5E8 1435 aa25.85■■□□□ 1.73
LPCAT4-204ENST00000563240 IQGAP2Q13576 1575 aa25.85■■□□□ 1.73
LPCAT4-204ENST00000563240 TNIKQ9UKE5 1360 aa25.81■■□□□ 1.72
LPCAT4-204ENST00000563240 ADCY10Q96PN6 1610 aa25.8■■□□□ 1.72
LPCAT4-204ENST00000563240 FAM69CQ0P6D2 419 aa25.77■■□□□ 1.72
LPCAT4-204ENST00000563240 DISP1Q96F81 1524 aa25.73■■□□□ 1.71
LPCAT4-204ENST00000563240 PRXQ9BXM0 1461 aa25.7■■□□□ 1.7
LPCAT4-204ENST00000563240 MAPKBP1O60336 1514 aa25.68■■□□□ 1.7
LPCAT4-204ENST00000563240 UGGT2Q9NYU1 1516 aa25.68■■□□□ 1.7
LPCAT4-204ENST00000563240 ABCC10Q5T3U5 1492 aa25.68■■□□□ 1.7
LPCAT4-204ENST00000563240 CSRNP3Q8WYN3 585 aa25.67■■□□□ 1.7
LPCAT4-204ENST00000563240 KIF13AQ9H1H9 1805 aa25.67■■□□□ 1.7
LPCAT4-204ENST00000563240 FAM9AQ8IZU1 332 aaPredicted RBP25.64■■□□□ 1.7
LPCAT4-204ENST00000563240 UACAQ9BZF9 1416 aa25.63■■□□□ 1.69
LPCAT4-204ENST00000563240 ABCC2Q92887 1545 aa25.62■■□□□ 1.69
LPCAT4-204ENST00000563240 KIAA0556O60303 1618 aa25.6■■□□□ 1.69
LPCAT4-204ENST00000563240 CTTNBP2Q8WZ74 1663 aa25.58■■□□□ 1.69
LPCAT4-204ENST00000563240 DIP2BQ9P265 1576 aa25.58■■□□□ 1.69
LPCAT4-204ENST00000563240 UHRF1BP1LA0JNW5 1464 aa25.57■■□□□ 1.68
LPCAT4-204ENST00000563240 P3H3Q8IVL6 736 aa25.54■■□□□ 1.68
LPCAT4-204ENST00000563240 ASXL2Q76L83 1435 aa25.54■■□□□ 1.68
LPCAT4-204ENST00000563240 GOLGA3Q08378 1498 aa25.53■■□□□ 1.68
LPCAT4-204ENST00000563240 RANGAP1P46060 587 aaPredicted RBP25.49■■□□□ 1.67
LPCAT4-204ENST00000563240 PLB1Q6P1J6 1458 aa25.48■■□□□ 1.67
LPCAT4-204ENST00000563240 EEA1Q15075 1411 aa25.48■■□□□ 1.67
LPCAT4-204ENST00000563240 CHIC1Q5VXU3 224 aa25.47■■□□□ 1.67
LPCAT4-204ENST00000563240 KDM5BQ9UGL1 1544 aa25.47■■□□□ 1.67
LPCAT4-204ENST00000563240 TSPOAP1O95153 1857 aa25.44■■□□□ 1.66
LPCAT4-204ENST00000563240 ARID3CA6NKF2 412 aa25.42■■□□□ 1.66
LPCAT4-204ENST00000563240 EHMT2Q96KQ7 1210 aa25.42■■□□□ 1.66
LPCAT4-204ENST00000563240 ZCCHC11Q5TAX3 1644 aaKnown RBP25.4■■□□□ 1.66
LPCAT4-204ENST00000563240 AEBP2Q6ZN18 517 aaPredicted RBP25.39■■□□□ 1.66
LPCAT4-204ENST00000563240 EPRSP07814 1512 aaKnown RBP25.36■■□□□ 1.65
LPCAT4-204ENST00000563240 ABCA8O94911 1581 aa25.35■■□□□ 1.65
LPCAT4-204ENST00000563240 KCNH8Q96L42 1107 aa25.35■■□□□ 1.65
LPCAT4-204ENST00000563240 GLI2P10070 1586 aa25.34■■□□□ 1.65
LPCAT4-204ENST00000563240 KDM6BO15054 1643 aa25.32■■□□□ 1.64
LPCAT4-204ENST00000563240 WDR7Q9Y4E6 1490 aa25.3■■□□□ 1.64
LPCAT4-204ENST00000563240 UBTFP17480 764 aaKnown RBP25.27■■□□□ 1.64
LPCAT4-204ENST00000563240 SAMD9Q5K651 1589 aa25.26■■□□□ 1.63
LPCAT4-204ENST00000563240 KIF21BO75037 1637 aa25.24■■□□□ 1.63
LPCAT4-204ENST00000563240 FHOD3Q2V2M9 1422 aa25.24■■□□□ 1.63
LPCAT4-204ENST00000563240 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.24■■□□□ 1.63
LPCAT4-204ENST00000563240 HNRNPUL2Q1KMD3 747 aaKnown RBP25.24■■□□□ 1.63
LPCAT4-204ENST00000563240 PPRC1Q5VV67 1664 aaKnown RBP25.23■■□□□ 1.63
LPCAT4-204ENST00000563240 ATP10BO94823 1461 aa25.22■■□□□ 1.63
LPCAT4-204ENST00000563240 MAP3K4Q9Y6R4 1608 aa25.21■■□□□ 1.63
LPCAT4-204ENST00000563240 CD109Q6YHK3 1445 aa25.17■■□□□ 1.62
LPCAT4-204ENST00000563240 TEX14Q8IWB6 1497 aa25.16■■□□□ 1.62
LPCAT4-204ENST00000563240 COL17A1Q9UMD9 1497 aaPredicted RBP25.15■■□□□ 1.62
LPCAT4-204ENST00000563240 RAPGEF6Q8TEU7 1601 aa25.15■■□□□ 1.62
LPCAT4-204ENST00000563240 NUP153P49790 1475 aaKnown RBP25.09■■□□□ 1.61
LPCAT4-204ENST00000563240 EFCAB5A4FU69 1503 aa25.07■■□□□ 1.6
LPCAT4-204ENST00000563240 MAGI3Q5TCQ9 1506 aa25.06■■□□□ 1.6
LPCAT4-204ENST00000563240 KDM4FA0A1W2PPD8 638 aa25.05■■□□□ 1.6
LPCAT4-204ENST00000563240 ATP1B4Q9UN42 357 aaPredicted RBP25.05■■□□□ 1.6
LPCAT4-204ENST00000563240 CFAP43Q8NDM7 1665 aa25.04■■□□□ 1.6
LPCAT4-204ENST00000563240 PLEKHD1A6NEE1 506 aa25.02■■□□□ 1.6
LPCAT4-204ENST00000563240 ARHGAP35Q9NRY4 1499 aa24.96■■□□□ 1.59
LPCAT4-204ENST00000563240 ABCA9Q8IUA7 1624 aa24.94■■□□□ 1.58
LPCAT4-204ENST00000563240 FMN1Q68DA7 1419 aa24.91■■□□□ 1.58
LPCAT4-204ENST00000563240 CDK13Q14004 1512 aaKnown RBP24.91■■□□□ 1.58
LPCAT4-204ENST00000563240 RAPGEF3O95398 923 aa24.87■■□□□ 1.57
LPCAT4-204ENST00000563240 ADGRL1O94910 1474 aa24.86■■□□□ 1.57
LPCAT4-204ENST00000563240 ARAP3Q8WWN8 1544 aa24.86■■□□□ 1.57
LPCAT4-204ENST00000563240 PHLDB1Q86UU1 1377 aa24.83■■□□□ 1.57
LPCAT4-204ENST00000563240 NEO1Q92859 1461 aa24.81■■□□□ 1.56
LPCAT4-204ENST00000563240 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.8■■□□□ 1.56
LPCAT4-204ENST00000563240 HECW1Q76N89 1606 aa24.79■■□□□ 1.56
LPCAT4-204ENST00000563240 CDK11AQ9UQ88 783 aaPredicted RBP24.79■■□□□ 1.56
LPCAT4-204ENST00000563240 TTC37Q6PGP7 1564 aa24.75■■□□□ 1.55
LPCAT4-204ENST00000563240 AKNAQ7Z591 1439 aa24.74■■□□□ 1.55
LPCAT4-204ENST00000563240 FANCAO15360 1455 aa24.74■■□□□ 1.55
LPCAT4-204ENST00000563240 CLIP1P30622 1438 aa24.71■■□□□ 1.55
LPCAT4-204ENST00000563240 DENND4BO75064 1496 aaPredicted RBP24.69■■□□□ 1.54
LPCAT4-204ENST00000563240 PLCH2O75038 1416 aa24.68■■□□□ 1.54
LPCAT4-204ENST00000563240 CASKIN1Q8WXD9 1431 aa24.68■■□□□ 1.54
LPCAT4-204ENST00000563240 TROQ12816 1431 aaPredicted RBP24.67■■□□□ 1.54
LPCAT4-204ENST00000563240 FRMPD1Q5SYB0 1578 aa24.66■■□□□ 1.54
LPCAT4-204ENST00000563240 ARID4BQ4LE39 1312 aaPredicted RBP24.65■■□□□ 1.54
LPCAT4-204ENST00000563240 PCF11O94913 1555 aaKnown RBP24.65■■□□□ 1.54
LPCAT4-204ENST00000563240 EFCAB2Q5VUJ9 269 aa24.64■■□□□ 1.54
LPCAT4-204ENST00000563240 KIF14Q15058 1648 aa24.64■■□□□ 1.53
LPCAT4-204ENST00000563240 LRRIQ1Q96JM4 1722 aa24.63■■□□□ 1.53
LPCAT4-204ENST00000563240 SCAPERQ9BY12 1400 aa24.61■■□□□ 1.53
LPCAT4-204ENST00000563240 CFAP74Q9C0B2 1584 aa24.61■■□□□ 1.53
LPCAT4-204ENST00000563240 CCDC18Q5T9S5 1454 aa24.58■■□□□ 1.53
LPCAT4-204ENST00000563240 RICTORQ6R327 1708 aa24.55■■□□□ 1.52
LPCAT4-204ENST00000563240 FYCO1Q9BQS8 1478 aa24.55■■□□□ 1.52
LPCAT4-204ENST00000563240 MYO5CQ9NQX4 1742 aa24.54■■□□□ 1.52
LPCAT4-204ENST00000563240 ARHGAP5Q13017 1502 aa24.54■■□□□ 1.52
LPCAT4-204ENST00000563240 LOC105371045A0A1W2PR82 267 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms