RNA–Protein interactions for RNA: ENST00000563009.5

EDC3-206, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-206ENST00000563009 ARHGEF11O15085 1522 aa25.31■■□□□ 1.64
EDC3-206ENST00000563009 RIMBP3CA6NJZ7 1639 aa25.28■■□□□ 1.64
EDC3-206ENST00000563009 RIMBP3BA6NNM3 1639 aa25.28■■□□□ 1.64
EDC3-206ENST00000563009 RIMBP3Q9UFD9 1639 aa25.28■■□□□ 1.64
EDC3-206ENST00000563009 KIF21BO75037 1637 aa25.26■■□□□ 1.63
EDC3-206ENST00000563009 JPH4Q96JJ6 628 aa25.22■■□□□ 1.63
EDC3-206ENST00000563009 IQGAP2Q13576 1575 aa25.22■■□□□ 1.63
EDC3-206ENST00000563009 CTTNBP2Q8WZ74 1663 aa25.2■■□□□ 1.63
EDC3-206ENST00000563009 ERCC6L2Q5T890 1561 aa25.16■■□□□ 1.62
EDC3-206ENST00000563009 PRG4Q92954 1404 aaPredicted RBP25.15■■□□□ 1.62
EDC3-206ENST00000563009 ARAP1Q96P48 1450 aa25.12■■□□□ 1.61
EDC3-206ENST00000563009 UGGT2Q9NYU1 1516 aa25.11■■□□□ 1.61
EDC3-206ENST00000563009 GOLGA3Q08378 1498 aa25.1■■□□□ 1.61
EDC3-206ENST00000563009 DISP1Q96F81 1524 aa25.03■■□□□ 1.6
EDC3-206ENST00000563009 CARMIL2Q6F5E8 1435 aa25.02■■□□□ 1.6
EDC3-206ENST00000563009 CYB5RLQ6IPT4 315 aa25.01■■□□□ 1.59
EDC3-206ENST00000563009 KIAA0556O60303 1618 aa24.97■■□□□ 1.59
EDC3-206ENST00000563009 UBTFP17480 764 aaKnown RBP24.96■■□□□ 1.59
EDC3-206ENST00000563009 EHMT2Q96KQ7 1210 aa24.95■■□□□ 1.58
EDC3-206ENST00000563009 TNIKQ9UKE5 1360 aa24.93■■□□□ 1.58
EDC3-206ENST00000563009 SAMD9Q5K651 1589 aa24.91■■□□□ 1.58
EDC3-206ENST00000563009 PTPRGP23470 1445 aa24.88■■□□□ 1.57
EDC3-206ENST00000563009 EFCAB5A4FU69 1503 aa24.84■■□□□ 1.57
EDC3-206ENST00000563009 RANGAP1P46060 587 aaPredicted RBP24.78■■□□□ 1.56
EDC3-206ENST00000563009 ADCY10Q96PN6 1610 aa24.77■■□□□ 1.56
EDC3-206ENST00000563009 P3H3Q8IVL6 736 aa24.76■■□□□ 1.55
EDC3-206ENST00000563009 TTBK1Q5TCY1 1321 aaPredicted RBP24.75■■□□□ 1.55
EDC3-206ENST00000563009 UACAQ9BZF9 1416 aa24.74■■□□□ 1.55
EDC3-206ENST00000563009 ARHGAP35Q9NRY4 1499 aa24.74■■□□□ 1.55
EDC3-206ENST00000563009 UHRF1BP1LA0JNW5 1464 aa24.73■■□□□ 1.55
EDC3-206ENST00000563009 FHOD3Q2V2M9 1422 aa24.72■■□□□ 1.55
EDC3-206ENST00000563009 LOC105371045A0A1W2PR82 267 aa24.72■■□□□ 1.55
EDC3-206ENST00000563009 ABCC2Q92887 1545 aa24.71■■□□□ 1.55
EDC3-206ENST00000563009 ABCA8O94911 1581 aa24.7■■□□□ 1.54
EDC3-206ENST00000563009 PLB1Q6P1J6 1458 aa24.69■■□□□ 1.54
EDC3-206ENST00000563009 CLIP1P30622 1438 aa24.65■■□□□ 1.54
EDC3-206ENST00000563009 KDM5BQ9UGL1 1544 aa24.61■■□□□ 1.53
EDC3-206ENST00000563009 CEP162Q5TB80 1403 aa24.61■■□□□ 1.53
EDC3-206ENST00000563009 RAPGEF6Q8TEU7 1601 aa24.6■■□□□ 1.53
EDC3-206ENST00000563009 NPM1P06748 294 aaKnown RBP eCLIP24.59■■□□□ 1.53
EDC3-206ENST00000563009 FMN1Q68DA7 1419 aa24.59■■□□□ 1.53
EDC3-206ENST00000563009 MAPKBP1O60336 1514 aa24.57■■□□□ 1.52
EDC3-206ENST00000563009 ZCCHC11Q5TAX3 1644 aaKnown RBP24.54■■□□□ 1.52
EDC3-206ENST00000563009 NUP153P49790 1475 aaKnown RBP24.52■■□□□ 1.52
EDC3-206ENST00000563009 ATP10BO94823 1461 aa24.48■■□□□ 1.51
EDC3-206ENST00000563009 ASXL2Q76L83 1435 aa24.46■■□□□ 1.51
EDC3-206ENST00000563009 HECW1Q76N89 1606 aa24.45■■□□□ 1.5
EDC3-206ENST00000563009 CASKIN1Q8WXD9 1431 aa24.43■■□□□ 1.5
EDC3-206ENST00000563009 PCF11O94913 1555 aaKnown RBP24.42■■□□□ 1.5
EDC3-206ENST00000563009 ABCC10Q5T3U5 1492 aa24.42■■□□□ 1.5
EDC3-206ENST00000563009 FYCO1Q9BQS8 1478 aa24.39■■□□□ 1.5
EDC3-206ENST00000563009 ARID3CA6NKF2 412 aa24.39■■□□□ 1.49
EDC3-206ENST00000563009 WDR7Q9Y4E6 1490 aa24.38■■□□□ 1.49
EDC3-206ENST00000563009 DIP2BQ9P265 1576 aa24.38■■□□□ 1.49
EDC3-206ENST00000563009 TRHP20396 242 aaPredicted RBP24.38■■□□□ 1.49
EDC3-206ENST00000563009 EPRSP07814 1512 aaKnown RBP24.38■■□□□ 1.49
EDC3-206ENST00000563009 KIF13AQ9H1H9 1805 aa24.38■■□□□ 1.49
EDC3-206ENST00000563009 LRRIQ1Q96JM4 1722 aa24.35■■□□□ 1.49
EDC3-206ENST00000563009 CDK13Q14004 1512 aaKnown RBP24.35■■□□□ 1.49
EDC3-206ENST00000563009 ATP1B4Q9UN42 357 aaPredicted RBP24.32■■□□□ 1.48
EDC3-206ENST00000563009 GLI2P10070 1586 aa24.32■■□□□ 1.48
EDC3-206ENST00000563009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.31■■□□□ 1.48
EDC3-206ENST00000563009 HNRNPUL2Q1KMD3 747 aaKnown RBP24.31■■□□□ 1.48
EDC3-206ENST00000563009 VPS8Q8N3P4 1428 aa24.31■■□□□ 1.48
EDC3-206ENST00000563009 CCDC18Q5T9S5 1454 aa24.31■■□□□ 1.48
EDC3-206ENST00000563009 FAM69CQ0P6D2 419 aa24.3■■□□□ 1.48
EDC3-206ENST00000563009 PLEKHD1A6NEE1 506 aa24.25■■□□□ 1.47
EDC3-206ENST00000563009 CDK11AQ9UQ88 783 aaPredicted RBP24.22■■□□□ 1.47
EDC3-206ENST00000563009 MAP3K4Q9Y6R4 1608 aa24.21■■□□□ 1.47
EDC3-206ENST00000563009 KCNH8Q96L42 1107 aa24.21■■□□□ 1.47
EDC3-206ENST00000563009 TROQ12816 1431 aaPredicted RBP24.18■■□□□ 1.46
EDC3-206ENST00000563009 CFAP43Q8NDM7 1665 aa24.18■■□□□ 1.46
EDC3-206ENST00000563009 ABCA9Q8IUA7 1624 aa24.17■■□□□ 1.46
EDC3-206ENST00000563009 MAGI3Q5TCQ9 1506 aa24.15■■□□□ 1.46
EDC3-206ENST00000563009 PPRC1Q5VV67 1664 aaKnown RBP24.13■■□□□ 1.45
EDC3-206ENST00000563009 TSPOAP1O95153 1857 aa24.12■■□□□ 1.45
EDC3-206ENST00000563009 CD109Q6YHK3 1445 aa24.11■■□□□ 1.45
EDC3-206ENST00000563009 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.11■■□□□ 1.45
EDC3-206ENST00000563009 TIAM1Q13009 1591 aa24.11■■□□□ 1.45
EDC3-206ENST00000563009 MAP3K1Q13233 1512 aa24.1■■□□□ 1.45
EDC3-206ENST00000563009 KIF14Q15058 1648 aa24.1■■□□□ 1.45
EDC3-206ENST00000563009 TTC37Q6PGP7 1564 aa24.08■■□□□ 1.45
EDC3-206ENST00000563009 TEX14Q8IWB6 1497 aa24.06■■□□□ 1.44
EDC3-206ENST00000563009 EHBP1L1Q8N3D4 1523 aa24.05■■□□□ 1.44
EDC3-206ENST00000563009 MTUS2Q5JR59 1369 aa24.04■■□□□ 1.44
EDC3-206ENST00000563009 LRRC9Q6ZRR7 1453 aa24■■□□□ 1.43
EDC3-206ENST00000563009 PLCH2O75038 1416 aa23.98■■□□□ 1.43
EDC3-206ENST00000563009 MYO5CQ9NQX4 1742 aa23.98■■□□□ 1.43
EDC3-206ENST00000563009 ARAP3Q8WWN8 1544 aa23.97■■□□□ 1.43
EDC3-206ENST00000563009 NEO1Q92859 1461 aa23.94■■□□□ 1.42
EDC3-206ENST00000563009 APLP2Q06481 763 aa23.94■■□□□ 1.42
EDC3-206ENST00000563009 KANK4Q5T7N3 995 aaPredicted RBP23.93■■□□□ 1.42
EDC3-206ENST00000563009 PHLDB1Q86UU1 1377 aa23.92■■□□□ 1.42
EDC3-206ENST00000563009 SUPT6HQ7KZ85 1726 aaKnown RBP23.92■■□□□ 1.42
EDC3-206ENST00000563009 FANCAO15360 1455 aa23.92■■□□□ 1.42
EDC3-206ENST00000563009 PREX2Q70Z35 1606 aa23.92■■□□□ 1.42
EDC3-206ENST00000563009 CFAP74Q9C0B2 1584 aa23.91■■□□□ 1.42
EDC3-206ENST00000563009 CDC42BPAQ5VT25 1732 aa23.91■■□□□ 1.42
EDC3-206ENST00000563009 KDM6BO15054 1643 aa23.91■■□□□ 1.42
EDC3-206ENST00000563009 CDC42BPBQ9Y5S2 1711 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms