RNA–Protein interactions for RNA: ENST00000563009.5

EDC3-206, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-206ENST00000563009 NISCHQ9Y2I1 1504 aa36.69■■■■□ 3.46
EDC3-206ENST00000563009 CCDC180Q9P1Z9 1646 aa32.53■■■□□ 2.8
EDC3-206ENST00000563009 ABCC9O60706 1549 aa31.5■■■□□ 2.63
EDC3-206ENST00000563009 ZCCHC6Q5VYS8 1495 aaKnown RBP30.63■■■□□ 2.49
EDC3-206ENST00000563009 NACADO15069 1562 aa30.51■■■□□ 2.47
EDC3-206ENST00000563009 RB1CC1Q8TDY2 1594 aa30.46■■■□□ 2.47
EDC3-206ENST00000563009 MYO15BQ96JP2 1530 aa30.46■■■□□ 2.47
EDC3-206ENST00000563009 DCAF8L2P0C7V8 631 aa30.42■■■□□ 2.46
EDC3-206ENST00000563009 DCAF1Q9Y4B6 1507 aa30.41■■■□□ 2.46
EDC3-206ENST00000563009 UNC13AQ9UPW8 1703 aa29.79■■■□□ 2.36
EDC3-206ENST00000563009 SCRIBQ14160 1630 aa29.64■■■□□ 2.34
EDC3-206ENST00000563009 BICRAQ9NZM4 1560 aa29.56■■■□□ 2.32
EDC3-206ENST00000563009 PABPN1Q86U42 306 aaKnown RBP eCLIP29.47■■■□□ 2.31
EDC3-206ENST00000563009 SHROOM4Q9ULL8 1493 aa29.29■■■□□ 2.28
EDC3-206ENST00000563009 EIF4G1Q04637 1599 aaKnown RBP28.74■■■□□ 2.19
EDC3-206ENST00000563009 DNAJC5BQ9UF47 199 aa28.7■■■□□ 2.18
EDC3-206ENST00000563009 CC2D2AQ9P2K1 1620 aa28.54■■■□□ 2.16
EDC3-206ENST00000563009 CECR2Q9BXF3 1484 aa28.53■■■□□ 2.16
EDC3-206ENST00000563009 SMARCA4P51532 1647 aa28.42■■■□□ 2.14
EDC3-206ENST00000563009 BAZ1AQ9NRL2 1556 aaPredicted RBP28.41■■■□□ 2.14
EDC3-206ENST00000563009 MROH2BQ7Z745 1585 aa28.27■■■□□ 2.12
EDC3-206ENST00000563009 ATAD2BQ9ULI0 1458 aa28.19■■■□□ 2.1
EDC3-206ENST00000563009 SMARCA2P51531 1590 aa28.17■■■□□ 2.1
EDC3-206ENST00000563009 PEG3Q9GZU2 1588 aa28.17■■■□□ 2.1
EDC3-206ENST00000563009 NCAPD3P42695 1498 aa28.15■■■□□ 2.1
EDC3-206ENST00000563009 RSF1Q96T23 1441 aaPredicted RBP28.05■■■□□ 2.08
EDC3-206ENST00000563009 HMGXB3Q12766 1538 aa28.04■■■□□ 2.08
EDC3-206ENST00000563009 WIZO95785 1651 aa27.97■■■□□ 2.07
EDC3-206ENST00000563009 BAZ1BQ9UIG0 1483 aaKnown RBP27.95■■■□□ 2.07
EDC3-206ENST00000563009 TOP2AP11388 1531 aaKnown RBP27.71■■■□□ 2.03
EDC3-206ENST00000563009 SUPT5HO00267 1087 aaKnown RBP27.44■■□□□ 1.98
EDC3-206ENST00000563009 CCDC88BA6NC98 1476 aa27.37■■□□□ 1.97
EDC3-206ENST00000563009 LAMC3Q9Y6N6 1575 aa27.36■■□□□ 1.97
EDC3-206ENST00000563009 NESP48681 1621 aa27.36■■□□□ 1.97
EDC3-206ENST00000563009 CADPSQ9ULU8 1353 aa27.32■■□□□ 1.96
EDC3-206ENST00000563009 CFTRP13569 1480 aa27.24■■□□□ 1.95
EDC3-206ENST00000563009 PDS5BQ9NTI5 1447 aa27.15■■□□□ 1.94
EDC3-206ENST00000563009 ERCC6Q03468 1493 aa27.13■■□□□ 1.93
EDC3-206ENST00000563009 PRDM2Q13029 1718 aa27.06■■□□□ 1.92
EDC3-206ENST00000563009 KIF21AQ7Z4S6 1674 aa27.05■■□□□ 1.92
EDC3-206ENST00000563009 FANCD2Q9BXW9 1451 aa27■■□□□ 1.91
EDC3-206ENST00000563009 CEP164Q9UPV0 1460 aa26.94■■□□□ 1.9
EDC3-206ENST00000563009 THOC2Q8NI27 1593 aaKnown RBP26.92■■□□□ 1.9
EDC3-206ENST00000563009 MRC2Q9UBG0 1479 aa26.86■■□□□ 1.89
EDC3-206ENST00000563009 CUX2O14529 1486 aa26.81■■□□□ 1.88
EDC3-206ENST00000563009 WDR62O43379 1518 aa26.79■■□□□ 1.88
EDC3-206ENST00000563009 URB2Q14146 1524 aaKnown RBP26.73■■□□□ 1.87
EDC3-206ENST00000563009 ABCC8Q09428 1581 aa26.63■■□□□ 1.85
EDC3-206ENST00000563009 TOPBP1Q92547 1522 aa26.61■■□□□ 1.85
EDC3-206ENST00000563009 DNMBPQ6XZF7 1577 aa26.61■■□□□ 1.85
EDC3-206ENST00000563009 CUX1P39880 1505 aa26.51■■□□□ 1.83
EDC3-206ENST00000563009 WRNQ14191 1432 aaPredicted RBP eCLIP26.42■■□□□ 1.82
EDC3-206ENST00000563009 POLA1P09884 1462 aaPredicted RBP26.4■■□□□ 1.82
EDC3-206ENST00000563009 IFT140Q96RY7 1462 aa26.37■■□□□ 1.81
EDC3-206ENST00000563009 FGD5Q6ZNL6 1462 aa26.36■■□□□ 1.81
EDC3-206ENST00000563009 TOP2BQ02880 1626 aa26.36■■□□□ 1.81
EDC3-206ENST00000563009 BIVM-ERCC5R4GMW8 1640 aa26.36■■□□□ 1.81
EDC3-206ENST00000563009 SYNJ1O43426 1573 aa26.35■■□□□ 1.81
EDC3-206ENST00000563009 TARBP1Q13395 1621 aaKnown RBP26.32■■□□□ 1.8
EDC3-206ENST00000563009 SOGA1O94964 1423 aa26.28■■□□□ 1.8
EDC3-206ENST00000563009 RAD54L2Q9Y4B4 1467 aa26.26■■□□□ 1.79
EDC3-206ENST00000563009 ZNF608Q9ULD9 1512 aaPredicted RBP26.23■■□□□ 1.79
EDC3-206ENST00000563009 WDR97A6NE52 1622 aa26.17■■□□□ 1.78
EDC3-206ENST00000563009 EIF4G3O43432 1585 aaKnown RBP26.15■■□□□ 1.78
EDC3-206ENST00000563009 ABCA10Q8WWZ4 1543 aa26.14■■□□□ 1.78
EDC3-206ENST00000563009 AQRO60306 1485 aaKnown RBP eCLIP26.1■■□□□ 1.77
EDC3-206ENST00000563009 TDRD9Q8NDG6 1382 aaKnown RBP26.08■■□□□ 1.77
EDC3-206ENST00000563009 ABCA5Q8WWZ7 1642 aa26.03■■□□□ 1.76
EDC3-206ENST00000563009 GAPVD1Q14C86 1478 aa25.99■■□□□ 1.75
EDC3-206ENST00000563009 DNAJC5Q9H3Z4 198 aa25.96■■□□□ 1.75
EDC3-206ENST00000563009 GRIN2BQ13224 1484 aa25.95■■□□□ 1.74
EDC3-206ENST00000563009 TRIM41Q8WV44 630 aa25.93■■□□□ 1.74
EDC3-206ENST00000563009 PBRM1Q86U86 1689 aa25.93■■□□□ 1.74
EDC3-206ENST00000563009 SNAPC4Q5SXM2 1469 aa25.87■■□□□ 1.73
EDC3-206ENST00000563009 MAGI1Q96QZ7 1491 aaPredicted RBP25.87■■□□□ 1.73
EDC3-206ENST00000563009 KIF27Q86VH2 1401 aa25.85■■□□□ 1.73
EDC3-206ENST00000563009 ERICH3Q5RHP9 1530 aa25.83■■□□□ 1.73
EDC3-206ENST00000563009 CHIC1Q5VXU3 224 aa25.8■■□□□ 1.72
EDC3-206ENST00000563009 SYNJ2O15056 1496 aa25.77■■□□□ 1.72
EDC3-206ENST00000563009 CHD1O14646 1710 aa25.76■■□□□ 1.71
EDC3-206ENST00000563009 ADAMTS12P58397 1594 aa25.75■■□□□ 1.71
EDC3-206ENST00000563009 IGF1RP08069 1367 aa25.72■■□□□ 1.71
EDC3-206ENST00000563009 FHAD1B1AJZ9 1412 aa25.71■■□□□ 1.71
EDC3-206ENST00000563009 OSCARQ8IYS5 282 aa25.7■■□□□ 1.7
EDC3-206ENST00000563009 RUSC2Q8N2Y8 1516 aa25.68■■□□□ 1.7
EDC3-206ENST00000563009 CHMP7Q8WUX9 453 aaPredicted RBP25.68■■□□□ 1.7
EDC3-206ENST00000563009 FBLN2P98095 1184 aa25.67■■□□□ 1.7
EDC3-206ENST00000563009 CUL7Q14999 1698 aa25.65■■□□□ 1.7
EDC3-206ENST00000563009 GRIN2AQ12879 1464 aa25.63■■□□□ 1.69
EDC3-206ENST00000563009 CARMIL1Q5VZK9 1371 aa25.56■■□□□ 1.68
EDC3-206ENST00000563009 EEA1Q15075 1411 aa25.54■■□□□ 1.68
EDC3-206ENST00000563009 NUP160Q12769 1436 aa25.52■■□□□ 1.68
EDC3-206ENST00000563009 CLASP1Q7Z460 1538 aa25.52■■□□□ 1.68
EDC3-206ENST00000563009 CEP170Q5SW79 1584 aa25.49■■□□□ 1.67
EDC3-206ENST00000563009 PRXQ9BXM0 1461 aa25.45■■□□□ 1.66
EDC3-206ENST00000563009 CSRNP3Q8WYN3 585 aa25.44■■□□□ 1.66
EDC3-206ENST00000563009 RAPGEF2Q9Y4G8 1499 aa25.44■■□□□ 1.66
EDC3-206ENST00000563009 FAM9AQ8IZU1 332 aaPredicted RBP25.34■■□□□ 1.65
EDC3-206ENST00000563009 KIAA0586Q9BVV6 1533 aa25.32■■□□□ 1.64
EDC3-206ENST00000563009 SHROOM2Q13796 1616 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms