RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 DNMBPQ6XZF7 1577 aa20.35■□□□□ 0.85
GTF3C1-203ENST00000562609 KANK4Q5T7N3 995 aaPredicted RBP20.34■□□□□ 0.85
GTF3C1-203ENST00000562609 P3H3Q8IVL6 736 aa20.31■□□□□ 0.84
GTF3C1-203ENST00000562609 URB2Q14146 1524 aaKnown RBP20.31■□□□□ 0.84
GTF3C1-203ENST00000562609 LAMC3Q9Y6N6 1575 aa20.31■□□□□ 0.84
GTF3C1-203ENST00000562609 ARHGAP35Q9NRY4 1499 aa20.31■□□□□ 0.84
GTF3C1-203ENST00000562609 TDRD9Q8NDG6 1382 aaKnown RBP20.28■□□□□ 0.84
GTF3C1-203ENST00000562609 PDS5BQ9NTI5 1447 aa20.25■□□□□ 0.83
GTF3C1-203ENST00000562609 ABCA10Q8WWZ4 1543 aa20.24■□□□□ 0.83
GTF3C1-203ENST00000562609 KIF21AQ7Z4S6 1674 aa20.22■□□□□ 0.83
GTF3C1-203ENST00000562609 ERICH6Q7L0X2 663 aa20.22■□□□□ 0.83
GTF3C1-203ENST00000562609 BCANQ96GW7 911 aa20.21■□□□□ 0.83
GTF3C1-203ENST00000562609 ATP1B4Q9UN42 357 aaPredicted RBP20.21■□□□□ 0.83
GTF3C1-203ENST00000562609 RBM19Q9Y4C8 960 aaKnown RBP20.18■□□□□ 0.82
GTF3C1-203ENST00000562609 ITGAEP38570 1179 aa20.11■□□□□ 0.81
GTF3C1-203ENST00000562609 FHOD3Q2V2M9 1422 aa20.09■□□□□ 0.81
GTF3C1-203ENST00000562609 GAPVD1Q14C86 1478 aa20.08■□□□□ 0.81
GTF3C1-203ENST00000562609 WDR97A6NE52 1622 aa20.05■□□□□ 0.8
GTF3C1-203ENST00000562609 FKBP8Q14318 412 aa20.05■□□□□ 0.8
GTF3C1-203ENST00000562609 MSH5O43196 834 aa20.05■□□□□ 0.8
GTF3C1-203ENST00000562609 CUL7Q14999 1698 aa20.02■□□□□ 0.8
GTF3C1-203ENST00000562609 AQRO60306 1485 aaKnown RBP eCLIP20.02■□□□□ 0.83e-7■■■□□ 16.8
GTF3C1-203ENST00000562609 ABCA5Q8WWZ7 1642 aa20.01■□□□□ 0.79
GTF3C1-203ENST00000562609 TARBP1Q13395 1621 aaKnown RBP19.97■□□□□ 0.79
GTF3C1-203ENST00000562609 TIAM1Q13009 1591 aa19.96■□□□□ 0.79
GTF3C1-203ENST00000562609 PCF11O94913 1555 aaKnown RBP19.96■□□□□ 0.79
GTF3C1-203ENST00000562609 CCNB3Q8WWL7 1395 aa19.95■□□□□ 0.78
GTF3C1-203ENST00000562609 FHAD1B1AJZ9 1412 aa19.94■□□□□ 0.78
GTF3C1-203ENST00000562609 MRC2Q9UBG0 1479 aa19.94■□□□□ 0.78
GTF3C1-203ENST00000562609 CTTNBP2Q8WZ74 1663 aa19.94■□□□□ 0.78
GTF3C1-203ENST00000562609 RRBP1Q9P2E9 1410 aaKnown RBP19.93■□□□□ 0.78
GTF3C1-203ENST00000562609 LRRC9Q6ZRR7 1453 aa19.91■□□□□ 0.78
GTF3C1-203ENST00000562609 KCNH8Q96L42 1107 aa19.91■□□□□ 0.78
GTF3C1-203ENST00000562609 ANO8Q9HCE9 1232 aaPredicted RBP19.9■□□□□ 0.78
GTF3C1-203ENST00000562609 ZNF608Q9ULD9 1512 aaPredicted RBP19.9■□□□□ 0.78
GTF3C1-203ENST00000562609 FAM50AQ14320 339 aaKnown RBP19.9■□□□□ 0.78
GTF3C1-203ENST00000562609 PHLDB1Q86UU1 1377 aa19.9■□□□□ 0.78
GTF3C1-203ENST00000562609 ERCC6Q03468 1493 aa19.86■□□□□ 0.77
GTF3C1-203ENST00000562609 EFCAB5A4FU69 1503 aa19.86■□□□□ 0.77
GTF3C1-203ENST00000562609 NEFLP07196 543 aa19.85■□□□□ 0.77
GTF3C1-203ENST00000562609 ARID3CA6NKF2 412 aa19.83■□□□□ 0.77
GTF3C1-203ENST00000562609 DEKP35659 375 aaKnown RBP19.83■□□□□ 0.77
GTF3C1-203ENST00000562609 PBRM1Q86U86 1689 aa19.83■□□□□ 0.76
GTF3C1-203ENST00000562609 CASKIN1Q8WXD9 1431 aa19.82■□□□□ 0.76
GTF3C1-203ENST00000562609 DHX57Q6P158 1386 aaKnown RBP19.82■□□□□ 0.76
GTF3C1-203ENST00000562609 MAP3K1Q13233 1512 aa19.82■□□□□ 0.76
GTF3C1-203ENST00000562609 FANCIQ9NVI1 1328 aa19.8■□□□□ 0.76
GTF3C1-203ENST00000562609 FMN1Q68DA7 1419 aa19.8■□□□□ 0.76
GTF3C1-203ENST00000562609 FYCO1Q9BQS8 1478 aa19.8■□□□□ 0.76
GTF3C1-203ENST00000562609 MYT1LQ9UL68 1186 aa19.8■□□□□ 0.76
GTF3C1-203ENST00000562609 CFAP43Q8NDM7 1665 aa19.78■□□□□ 0.76
GTF3C1-203ENST00000562609 GRIN2BQ13224 1484 aa19.77■□□□□ 0.76
GTF3C1-203ENST00000562609 SNAPC4Q5SXM2 1469 aa19.77■□□□□ 0.76
GTF3C1-203ENST00000562609 WDR62O43379 1518 aa19.76■□□□□ 0.75
GTF3C1-203ENST00000562609 SAMD9Q5K651 1589 aa19.75■□□□□ 0.75
GTF3C1-203ENST00000562609 FBLN2P98095 1184 aa19.75■□□□□ 0.75
GTF3C1-203ENST00000562609 IFT140Q96RY7 1462 aa19.75■□□□□ 0.75
GTF3C1-203ENST00000562609 MTUS2Q5JR59 1369 aa19.75■□□□□ 0.75
GTF3C1-203ENST00000562609 ADAMTS12P58397 1594 aa19.74■□□□□ 0.75
GTF3C1-203ENST00000562609 RAB3GAP2Q9H2M9 1393 aa19.73■□□□□ 0.75
GTF3C1-203ENST00000562609 LRRIQ1Q96JM4 1722 aa19.7■□□□□ 0.74
GTF3C1-203ENST00000562609 IQGAP2Q13576 1575 aa19.68■□□□□ 0.74
GTF3C1-203ENST00000562609 SALL2Q9Y467 1007 aaPredicted RBP19.66■□□□□ 0.74
GTF3C1-203ENST00000562609 EIF4G3O43432 1585 aaKnown RBP19.66■□□□□ 0.74
GTF3C1-203ENST00000562609 CHMP7Q8WUX9 453 aaPredicted RBP19.65■□□□□ 0.74
GTF3C1-203ENST00000562609 SETD5Q9C0A6 1442 aa19.63■□□□□ 0.73
GTF3C1-203ENST00000562609 THOC2Q8NI27 1593 aaKnown RBP19.62■□□□□ 0.73
GTF3C1-203ENST00000562609 CDK11AQ9UQ88 783 aaPredicted RBP19.62■□□□□ 0.73
GTF3C1-203ENST00000562609 FGD6Q6ZV73 1430 aa19.61■□□□□ 0.73
GTF3C1-203ENST00000562609 NCOA2Q15596 1464 aa19.59■□□□□ 0.73
GTF3C1-203ENST00000562609 MAGI3Q5TCQ9 1506 aa19.59■□□□□ 0.73
GTF3C1-203ENST00000562609 TRIM52Q96A61 297 aa19.59■□□□□ 0.73
GTF3C1-203ENST00000562609 GRIN2AQ12879 1464 aa19.58■□□□□ 0.73
GTF3C1-203ENST00000562609 CDK13Q14004 1512 aaKnown RBP19.58■□□□□ 0.72
GTF3C1-203ENST00000562609 CCDC136Q96JN2 1154 aa19.57■□□□□ 0.72
GTF3C1-203ENST00000562609 SIN3AQ96ST3 1273 aa19.56■□□□□ 0.72
GTF3C1-203ENST00000562609 ERICH6BQ5W0A0 696 aa19.56■□□□□ 0.72
GTF3C1-203ENST00000562609 KIAA0586Q9BVV6 1533 aa19.54■□□□□ 0.72
GTF3C1-203ENST00000562609 PTPRKQ15262 1439 aa19.54■□□□□ 0.72
GTF3C1-203ENST00000562609 CHIC2Q9UKJ5 165 aa19.53■□□□□ 0.72
GTF3C1-203ENST00000562609 EPRSP07814 1512 aaKnown RBP19.53■□□□□ 0.72
GTF3C1-203ENST00000562609 DISP1Q96F81 1524 aa19.52■□□□□ 0.72
GTF3C1-203ENST00000562609 MYOM3Q5VTT5 1437 aa19.52■□□□□ 0.71
GTF3C1-203ENST00000562609 MAPKBP1O60336 1514 aa19.52■□□□□ 0.71
GTF3C1-203ENST00000562609 NBR1Q14596 966 aa19.52■□□□□ 0.71
GTF3C1-203ENST00000562609 UGGT2Q9NYU1 1516 aa19.51■□□□□ 0.71
GTF3C1-203ENST00000562609 DDX10Q13206 875 aaKnown RBP19.5■□□□□ 0.71
GTF3C1-203ENST00000562609 SUPT6HQ7KZ85 1726 aaKnown RBP19.5■□□□□ 0.71
GTF3C1-203ENST00000562609 HECW1Q76N89 1606 aa19.49■□□□□ 0.71
GTF3C1-203ENST00000562609 EHBP1L1Q8N3D4 1523 aa19.49■□□□□ 0.71
GTF3C1-203ENST00000562609 SYNJ2O15056 1496 aa19.47■□□□□ 0.71
GTF3C1-203ENST00000562609 CCDC18Q5T9S5 1454 aa19.47■□□□□ 0.71
GTF3C1-203ENST00000562609 RRP7BPQ9NSQ0 103 aa19.47■□□□□ 0.71
GTF3C1-203ENST00000562609 MAGI1Q96QZ7 1491 aaPredicted RBP19.47■□□□□ 0.71
GTF3C1-203ENST00000562609 CEP170Q5SW79 1584 aa19.47■□□□□ 0.71
GTF3C1-203ENST00000562609 KIAA0556O60303 1618 aa19.47■□□□□ 0.71
GTF3C1-203ENST00000562609 JPH4Q96JJ6 628 aa19.45■□□□□ 0.7
GTF3C1-203ENST00000562609 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.45■□□□□ 0.7
GTF3C1-203ENST00000562609 IRX6P78412 446 aaPredicted RBP19.44■□□□□ 0.7
GTF3C1-203ENST00000562609 UBE2Q2Q8WVN8 375 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms