RNA–Protein interactions for RNA: ENST00000561707.1

COTL1-202, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 1 (best)

Gene COTL1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-202ENST00000561707 DNAJC5Q9H3Z4 198 aa20.59■□□□□ 0.89
COTL1-202ENST00000561707 CTTNBP2Q8WZ74 1663 aa20.58■□□□□ 0.88
COTL1-202ENST00000561707 CEP162Q5TB80 1403 aa20.57■□□□□ 0.88
COTL1-202ENST00000561707 CEP170Q5SW79 1584 aa20.55■□□□□ 0.88
COTL1-202ENST00000561707 NUP160Q12769 1436 aa20.53■□□□□ 0.88
COTL1-202ENST00000561707 CLIP1P30622 1438 aa20.52■□□□□ 0.87
COTL1-202ENST00000561707 KIAA0586Q9BVV6 1533 aa20.5■□□□□ 0.87
COTL1-202ENST00000561707 P3H3Q8IVL6 736 aa20.49■□□□□ 0.87
COTL1-202ENST00000561707 IQGAP2Q13576 1575 aa20.46■□□□□ 0.87
COTL1-202ENST00000561707 JPH4Q96JJ6 628 aa20.45■□□□□ 0.86
COTL1-202ENST00000561707 ARHGAP35Q9NRY4 1499 aa20.43■□□□□ 0.86
COTL1-202ENST00000561707 OSCARQ8IYS5 282 aa20.42■□□□□ 0.86
COTL1-202ENST00000561707 UGGT2Q9NYU1 1516 aa20.37■□□□□ 0.85
COTL1-202ENST00000561707 ARAP1Q96P48 1450 aa20.37■□□□□ 0.85
COTL1-202ENST00000561707 CLASP1Q7Z460 1538 aa20.36■□□□□ 0.85
COTL1-202ENST00000561707 FHOD3Q2V2M9 1422 aa20.34■□□□□ 0.85
COTL1-202ENST00000561707 SAMD9Q5K651 1589 aa20.34■□□□□ 0.85
COTL1-202ENST00000561707 EFCAB5A4FU69 1503 aa20.32■□□□□ 0.84
COTL1-202ENST00000561707 DISP1Q96F81 1524 aa20.32■□□□□ 0.84
COTL1-202ENST00000561707 TTBK1Q5TCY1 1321 aaPredicted RBP20.3■□□□□ 0.84
COTL1-202ENST00000561707 PRG4Q92954 1404 aaPredicted RBP20.3■□□□□ 0.84
COTL1-202ENST00000561707 SHROOM2Q13796 1616 aa20.29■□□□□ 0.84
COTL1-202ENST00000561707 KIAA0556O60303 1618 aa20.27■□□□□ 0.83
COTL1-202ENST00000561707 ERCC6L2Q5T890 1561 aa20.25■□□□□ 0.83
COTL1-202ENST00000561707 CARMIL2Q6F5E8 1435 aa20.25■□□□□ 0.83
COTL1-202ENST00000561707 VPS8Q8N3P4 1428 aa20.25■□□□□ 0.83
COTL1-202ENST00000561707 ATP1B4Q9UN42 357 aaPredicted RBP20.19■□□□□ 0.82
COTL1-202ENST00000561707 PPARGC1BQ86YN6 1023 aaKnown RBP20.17■□□□□ 0.82
COTL1-202ENST00000561707 FMN1Q68DA7 1419 aa20.16■□□□□ 0.82
COTL1-202ENST00000561707 PTPRGP23470 1445 aa20.14■□□□□ 0.81
COTL1-202ENST00000561707 PCF11O94913 1555 aaKnown RBP20.12■□□□□ 0.81
COTL1-202ENST00000561707 CASKIN1Q8WXD9 1431 aa20.11■□□□□ 0.81
COTL1-202ENST00000561707 APLP2Q06481 763 aa20.09■□□□□ 0.81
COTL1-202ENST00000561707 PLB1Q6P1J6 1458 aa20.08■□□□□ 0.81
COTL1-202ENST00000561707 ARID3CA6NKF2 412 aa20.08■□□□□ 0.81
COTL1-202ENST00000561707 FYCO1Q9BQS8 1478 aa20.05■□□□□ 0.8
COTL1-202ENST00000561707 RAPGEF6Q8TEU7 1601 aa20.04■□□□□ 0.8
COTL1-202ENST00000561707 LRRIQ1Q96JM4 1722 aa20.04■□□□□ 0.8
COTL1-202ENST00000561707 KANK4Q5T7N3 995 aaPredicted RBP20.03■□□□□ 0.8
COTL1-202ENST00000561707 ABCA8O94911 1581 aa20.03■□□□□ 0.8
COTL1-202ENST00000561707 ARHGEF11O15085 1522 aa20.02■□□□□ 0.79
COTL1-202ENST00000561707 UACAQ9BZF9 1416 aa20■□□□□ 0.79
COTL1-202ENST00000561707 NUP153P49790 1475 aaKnown RBP19.99■□□□□ 0.79
COTL1-202ENST00000561707 HECW1Q76N89 1606 aa19.98■□□□□ 0.79
COTL1-202ENST00000561707 RIMBP3CA6NJZ7 1639 aa19.98■□□□□ 0.79
COTL1-202ENST00000561707 RIMBP3BA6NNM3 1639 aa19.98■□□□□ 0.79
COTL1-202ENST00000561707 RIMBP3Q9UFD9 1639 aa19.98■□□□□ 0.79
COTL1-202ENST00000561707 EPRSP07814 1512 aaKnown RBP19.96■□□□□ 0.79
COTL1-202ENST00000561707 CDK13Q14004 1512 aaKnown RBP19.96■□□□□ 0.79
COTL1-202ENST00000561707 TIAM1Q13009 1591 aa19.95■□□□□ 0.78
COTL1-202ENST00000561707 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.95■□□□□ 0.78
COTL1-202ENST00000561707 HNRNPUL2Q1KMD3 747 aaKnown RBP19.95■□□□□ 0.78
COTL1-202ENST00000561707 MAP3K1Q13233 1512 aa19.94■□□□□ 0.78
COTL1-202ENST00000561707 CYB5RLQ6IPT4 315 aa19.93■□□□□ 0.78
COTL1-202ENST00000561707 ATP10BO94823 1461 aa19.92■□□□□ 0.78
COTL1-202ENST00000561707 CFAP43Q8NDM7 1665 aa19.92■□□□□ 0.78
COTL1-202ENST00000561707 ABCC2Q92887 1545 aa19.91■□□□□ 0.78
COTL1-202ENST00000561707 CCDC18Q5T9S5 1454 aa19.9■□□□□ 0.78
COTL1-202ENST00000561707 UHRF1BP1LA0JNW5 1464 aa19.89■□□□□ 0.77
COTL1-202ENST00000561707 LRRC9Q6ZRR7 1453 aa19.89■□□□□ 0.77
COTL1-202ENST00000561707 ADCY10Q96PN6 1610 aa19.88■□□□□ 0.77
COTL1-202ENST00000561707 MAGI3Q5TCQ9 1506 aa19.86■□□□□ 0.77
COTL1-202ENST00000561707 MTUS2Q5JR59 1369 aa19.84■□□□□ 0.77
COTL1-202ENST00000561707 PLEKHD1A6NEE1 506 aa19.83■□□□□ 0.77
COTL1-202ENST00000561707 CDK11AQ9UQ88 783 aaPredicted RBP19.83■□□□□ 0.77
COTL1-202ENST00000561707 KDM5BQ9UGL1 1544 aa19.81■□□□□ 0.76
COTL1-202ENST00000561707 ZCCHC11Q5TAX3 1644 aaKnown RBP19.81■□□□□ 0.76
COTL1-202ENST00000561707 NPM1P06748 294 aaKnown RBP eCLIP19.78■□□□□ 0.76
COTL1-202ENST00000561707 EHBP1L1Q8N3D4 1523 aa19.76■□□□□ 0.75
COTL1-202ENST00000561707 TROQ12816 1431 aaPredicted RBP19.76■□□□□ 0.75
COTL1-202ENST00000561707 KCNH8Q96L42 1107 aa19.75■□□□□ 0.75
COTL1-202ENST00000561707 TRIM26Q12899 539 aaPredicted RBP19.74■□□□□ 0.75
COTL1-202ENST00000561707 SUPT6HQ7KZ85 1726 aaKnown RBP19.72■□□□□ 0.75
COTL1-202ENST00000561707 NCOA2Q15596 1464 aa19.72■□□□□ 0.75
COTL1-202ENST00000561707 PHLDB1Q86UU1 1377 aa19.71■□□□□ 0.75
COTL1-202ENST00000561707 KIF14Q15058 1648 aa19.69■□□□□ 0.74
COTL1-202ENST00000561707 ASXL2Q76L83 1435 aa19.68■□□□□ 0.74
COTL1-202ENST00000561707 PCGF6Q9BYE7 350 aa19.67■□□□□ 0.74
COTL1-202ENST00000561707 WDR7Q9Y4E6 1490 aa19.63■□□□□ 0.73
COTL1-202ENST00000561707 ABCC10Q5T3U5 1492 aa19.62■□□□□ 0.73
COTL1-202ENST00000561707 CCNB3Q8WWL7 1395 aa19.62■□□□□ 0.73
COTL1-202ENST00000561707 MYOM3Q5VTT5 1437 aa19.6■□□□□ 0.73
COTL1-202ENST00000561707 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.59■□□□□ 0.73
COTL1-202ENST00000561707 RRBP1Q9P2E9 1410 aaKnown RBP19.59■□□□□ 0.73
COTL1-202ENST00000561707 GPATCH8Q9UKJ3 1502 aaKnown RBP19.58■□□□□ 0.73
COTL1-202ENST00000561707 FAM50AQ14320 339 aaKnown RBP19.58■□□□□ 0.72
COTL1-202ENST00000561707 FGD6Q6ZV73 1430 aa19.57■□□□□ 0.72
COTL1-202ENST00000561707 CDC42BPAQ5VT25 1732 aa19.56■□□□□ 0.72
COTL1-202ENST00000561707 TTC37Q6PGP7 1564 aa19.56■□□□□ 0.72
COTL1-202ENST00000561707 CFDP1Q9UEE9 299 aaPredicted RBP19.55■□□□□ 0.72
COTL1-202ENST00000561707 MAPKBP1O60336 1514 aa19.55■□□□□ 0.72
COTL1-202ENST00000561707 ZNF644Q9H582 1327 aaPredicted RBP19.54■□□□□ 0.72
COTL1-202ENST00000561707 ZNF777Q9ULD5 760 aaPredicted RBP19.54■□□□□ 0.72
COTL1-202ENST00000561707 ITGAEP38570 1179 aa19.52■□□□□ 0.72
COTL1-202ENST00000561707 AEBP2Q6ZN18 517 aaPredicted RBP19.52■□□□□ 0.72
COTL1-202ENST00000561707 PTPN23Q9H3S7 1636 aa19.51■□□□□ 0.71
COTL1-202ENST00000561707 CDC42BPBQ9Y5S2 1711 aa19.51■□□□□ 0.71
COTL1-202ENST00000561707 MIA2Q96PC5 1412 aa19.51■□□□□ 0.71
COTL1-202ENST00000561707 ITSN2Q9NZM3 1697 aa19.49■□□□□ 0.71
COTL1-202ENST00000561707 MYO5CQ9NQX4 1742 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms