RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 OSCARQ8IYS5 282 aa18.94■□□□□ 0.62
HERC1-214ENST00000561400 LOC105371045A0A1W2PR82 267 aa18.93■□□□□ 0.62
HERC1-214ENST00000561400 CTTNBP2Q8WZ74 1663 aa18.91■□□□□ 0.62
HERC1-214ENST00000561400 UBTFP17480 764 aaKnown RBP18.9■□□□□ 0.62
HERC1-214ENST00000561400 CLASP1Q7Z460 1538 aa18.89■□□□□ 0.61
HERC1-214ENST00000561400 KIAA0586Q9BVV6 1533 aa18.88■□□□□ 0.61
HERC1-214ENST00000561400 IQGAP2Q13576 1575 aa18.84■□□□□ 0.61
HERC1-214ENST00000561400 TTBK1Q5TCY1 1321 aaPredicted RBP18.81■□□□□ 0.6
HERC1-214ENST00000561400 TNIKQ9UKE5 1360 aa18.8■□□□□ 0.6
HERC1-214ENST00000561400 JPH4Q96JJ6 628 aa18.79■□□□□ 0.6
HERC1-214ENST00000561400 SHROOM2Q13796 1616 aa18.79■□□□□ 0.6
HERC1-214ENST00000561400 RANGAP1P46060 587 aaPredicted RBP18.75■□□□□ 0.59
HERC1-214ENST00000561400 UGGT2Q9NYU1 1516 aa18.75■□□□□ 0.59
HERC1-214ENST00000561400 ERCC6L2Q5T890 1561 aa18.71■□□□□ 0.59
HERC1-214ENST00000561400 PRG4Q92954 1404 aaPredicted RBP18.71■□□□□ 0.59
HERC1-214ENST00000561400 DISP1Q96F81 1524 aa18.7■□□□□ 0.58
HERC1-214ENST00000561400 SAMD9Q5K651 1589 aa18.68■□□□□ 0.58
HERC1-214ENST00000561400 CEP162Q5TB80 1403 aa18.67■□□□□ 0.58
HERC1-214ENST00000561400 KIAA0556O60303 1618 aa18.66■□□□□ 0.58
HERC1-214ENST00000561400 ARHGAP35Q9NRY4 1499 aa18.65■□□□□ 0.58
HERC1-214ENST00000561400 CLIP1P30622 1438 aa18.65■□□□□ 0.58
HERC1-214ENST00000561400 ARHGEF11O15085 1522 aa18.65■□□□□ 0.58
HERC1-214ENST00000561400 CARMIL2Q6F5E8 1435 aa18.64■□□□□ 0.57
HERC1-214ENST00000561400 P3H3Q8IVL6 736 aa18.64■□□□□ 0.57
HERC1-214ENST00000561400 EFCAB5A4FU69 1503 aa18.64■□□□□ 0.57
HERC1-214ENST00000561400 RIMBP3CA6NJZ7 1639 aa18.62■□□□□ 0.57
HERC1-214ENST00000561400 RIMBP3BA6NNM3 1639 aa18.62■□□□□ 0.57
HERC1-214ENST00000561400 RIMBP3Q9UFD9 1639 aa18.62■□□□□ 0.57
HERC1-214ENST00000561400 DNAJC5Q9H3Z4 198 aa18.61■□□□□ 0.57
HERC1-214ENST00000561400 FHOD3Q2V2M9 1422 aa18.59■□□□□ 0.57
HERC1-214ENST00000561400 ARAP1Q96P48 1450 aa18.57■□□□□ 0.56
HERC1-214ENST00000561400 PTPRGP23470 1445 aa18.53■□□□□ 0.56
HERC1-214ENST00000561400 CYB5RLQ6IPT4 315 aa18.46■□□□□ 0.55
HERC1-214ENST00000561400 FMN1Q68DA7 1419 aa18.46■□□□□ 0.55
HERC1-214ENST00000561400 PLB1Q6P1J6 1458 aa18.46■□□□□ 0.55
HERC1-214ENST00000561400 ABCA8O94911 1581 aa18.43■□□□□ 0.54
HERC1-214ENST00000561400 UACAQ9BZF9 1416 aa18.42■□□□□ 0.54
HERC1-214ENST00000561400 RAPGEF6Q8TEU7 1601 aa18.42■□□□□ 0.54
HERC1-214ENST00000561400 PCF11O94913 1555 aaKnown RBP18.41■□□□□ 0.54
HERC1-214ENST00000561400 VPS8Q8N3P4 1428 aa18.41■□□□□ 0.54
HERC1-214ENST00000561400 ADCY10Q96PN6 1610 aa18.4■□□□□ 0.54
HERC1-214ENST00000561400 ABCC2Q92887 1545 aa18.38■□□□□ 0.53
HERC1-214ENST00000561400 CASKIN1Q8WXD9 1431 aa18.37■□□□□ 0.53
HERC1-214ENST00000561400 UHRF1BP1LA0JNW5 1464 aa18.37■□□□□ 0.53
HERC1-214ENST00000561400 NUP153P49790 1475 aaKnown RBP18.36■□□□□ 0.53
HERC1-214ENST00000561400 LRRIQ1Q96JM4 1722 aa18.36■□□□□ 0.53
HERC1-214ENST00000561400 ATP1B4Q9UN42 357 aaPredicted RBP18.35■□□□□ 0.53
HERC1-214ENST00000561400 FYCO1Q9BQS8 1478 aa18.35■□□□□ 0.53
HERC1-214ENST00000561400 HECW1Q76N89 1606 aa18.34■□□□□ 0.53
HERC1-214ENST00000561400 ARID3CA6NKF2 412 aa18.33■□□□□ 0.52
HERC1-214ENST00000561400 PRKCSHP14314 528 aaPredicted RBP18.33■□□□□ 0.52
HERC1-214ENST00000561400 KDM5BQ9UGL1 1544 aa18.3■□□□□ 0.52
HERC1-214ENST00000561400 ATP10BO94823 1461 aa18.29■□□□□ 0.52
HERC1-214ENST00000561400 EPRSP07814 1512 aaKnown RBP18.29■□□□□ 0.52
HERC1-214ENST00000561400 ZCCHC11Q5TAX3 1644 aaKnown RBP18.29■□□□□ 0.52
HERC1-214ENST00000561400 CDK13Q14004 1512 aaKnown RBP18.29■□□□□ 0.52
HERC1-214ENST00000561400 NPM1P06748 294 aaKnown RBP eCLIP18.23■□□□□ 0.51
HERC1-214ENST00000561400 CCDC18Q5T9S5 1454 aa18.23■□□□□ 0.51
HERC1-214ENST00000561400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.23■□□□□ 0.51
HERC1-214ENST00000561400 HNRNPUL2Q1KMD3 747 aaKnown RBP18.23■□□□□ 0.51
HERC1-214ENST00000561400 SLC24A1O60721 1099 aa18.22■□□□□ 0.51
HERC1-214ENST00000561400 CFAP43Q8NDM7 1665 aa18.21■□□□□ 0.51
HERC1-214ENST00000561400 TIAM1Q13009 1591 aa18.21■□□□□ 0.51
HERC1-214ENST00000561400 MAP3K1Q13233 1512 aa18.18■□□□□ 0.5
HERC1-214ENST00000561400 MAGI3Q5TCQ9 1506 aa18.18■□□□□ 0.5
HERC1-214ENST00000561400 ASXL2Q76L83 1435 aa18.17■□□□□ 0.5
HERC1-214ENST00000561400 MAPKBP1O60336 1514 aa18.17■□□□□ 0.5
HERC1-214ENST00000561400 APLP2Q06481 763 aa18.16■□□□□ 0.5
HERC1-214ENST00000561400 PLEKHD1A6NEE1 506 aa18.14■□□□□ 0.49
HERC1-214ENST00000561400 KANK4Q5T7N3 995 aaPredicted RBP18.14■□□□□ 0.49
HERC1-214ENST00000561400 CDK11AQ9UQ88 783 aaPredicted RBP18.14■□□□□ 0.49
HERC1-214ENST00000561400 WDR7Q9Y4E6 1490 aa18.13■□□□□ 0.49
HERC1-214ENST00000561400 LRRC9Q6ZRR7 1453 aa18.12■□□□□ 0.49
HERC1-214ENST00000561400 TROQ12816 1431 aaPredicted RBP18.11■□□□□ 0.49
HERC1-214ENST00000561400 MTUS2Q5JR59 1369 aa18.11■□□□□ 0.49
HERC1-214ENST00000561400 KCNH8Q96L42 1107 aa18.09■□□□□ 0.49
HERC1-214ENST00000561400 PPARGC1BQ86YN6 1023 aaKnown RBP18.08■□□□□ 0.49
HERC1-214ENST00000561400 EHBP1L1Q8N3D4 1523 aa18.08■□□□□ 0.49
HERC1-214ENST00000561400 KIF14Q15058 1648 aa18.08■□□□□ 0.48
HERC1-214ENST00000561400 DIP2BQ9P265 1576 aa18.04■□□□□ 0.48
HERC1-214ENST00000561400 KIF13AQ9H1H9 1805 aa18.04■□□□□ 0.48
HERC1-214ENST00000561400 ABCC10Q5T3U5 1492 aa18.04■□□□□ 0.48
HERC1-214ENST00000561400 SUPT6HQ7KZ85 1726 aaKnown RBP18.03■□□□□ 0.48
HERC1-214ENST00000561400 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.02■□□□□ 0.48
HERC1-214ENST00000561400 TTC37Q6PGP7 1564 aa18.01■□□□□ 0.47
HERC1-214ENST00000561400 ABCA9Q8IUA7 1624 aa18■□□□□ 0.47
HERC1-214ENST00000561400 NCOA2Q15596 1464 aa18■□□□□ 0.47
HERC1-214ENST00000561400 GLI2P10070 1586 aa17.99■□□□□ 0.47
HERC1-214ENST00000561400 FAM69CQ0P6D2 419 aa17.99■□□□□ 0.47
HERC1-214ENST00000561400 ERICH6Q7L0X2 663 aa17.99■□□□□ 0.47
HERC1-214ENST00000561400 MAP3K4Q9Y6R4 1608 aa17.96■□□□□ 0.47
HERC1-214ENST00000561400 CDC42BPAQ5VT25 1732 aa17.95■□□□□ 0.46
HERC1-214ENST00000561400 TRHP20396 242 aaPredicted RBP17.94■□□□□ 0.46
HERC1-214ENST00000561400 MYO5CQ9NQX4 1742 aa17.94■□□□□ 0.46
HERC1-214ENST00000561400 PHLDB1Q86UU1 1377 aa17.93■□□□□ 0.46
HERC1-214ENST00000561400 TSPOAP1O95153 1857 aa17.93■□□□□ 0.46
HERC1-214ENST00000561400 CD109Q6YHK3 1445 aa17.92■□□□□ 0.46
HERC1-214ENST00000561400 CDC42BPBQ9Y5S2 1711 aa17.92■□□□□ 0.46
HERC1-214ENST00000561400 GPATCH8Q9UKJ3 1502 aaKnown RBP17.92■□□□□ 0.46
HERC1-214ENST00000561400 CCNB3Q8WWL7 1395 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms