RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 NISCHQ9Y2I1 1504 aa27.43■■□□□ 1.98
HERC1-214ENST00000561400 CCDC180Q9P1Z9 1646 aa24.2■■□□□ 1.46
HERC1-214ENST00000561400 ABCC9O60706 1549 aa23.32■■□□□ 1.32
HERC1-214ENST00000561400 ZCCHC6Q5VYS8 1495 aaKnown RBP22.93■■□□□ 1.26
HERC1-214ENST00000561400 DCAF8L2P0C7V8 631 aa22.78■■□□□ 1.24
HERC1-214ENST00000561400 DCAF1Q9Y4B6 1507 aa22.69■■□□□ 1.22
HERC1-214ENST00000561400 NACADO15069 1562 aa22.64■■□□□ 1.21
HERC1-214ENST00000561400 MYO15BQ96JP2 1530 aa22.62■■□□□ 1.21
HERC1-214ENST00000561400 RB1CC1Q8TDY2 1594 aa22.57■■□□□ 1.2
HERC1-214ENST00000561400 UNC13AQ9UPW8 1703 aa22.16■■□□□ 1.14
HERC1-214ENST00000561400 SCRIBQ14160 1630 aa22.15■■□□□ 1.14
HERC1-214ENST00000561400 SHROOM4Q9ULL8 1493 aa21.96■■□□□ 1.11
HERC1-214ENST00000561400 BICRAQ9NZM4 1560 aa21.93■■□□□ 1.1
HERC1-214ENST00000561400 PABPN1Q86U42 306 aaKnown RBP eCLIP21.87■■□□□ 1.09
HERC1-214ENST00000561400 CECR2Q9BXF3 1484 aa21.36■■□□□ 1.01
HERC1-214ENST00000561400 EIF4G1Q04637 1599 aaKnown RBP21.29■■□□□ 1
HERC1-214ENST00000561400 BAZ1AQ9NRL2 1556 aaPredicted RBP21.22■□□□□ 0.99
HERC1-214ENST00000561400 SMARCA4P51532 1647 aa21.21■□□□□ 0.99
HERC1-214ENST00000561400 MROH2BQ7Z745 1585 aa21.18■□□□□ 0.98
HERC1-214ENST00000561400 CC2D2AQ9P2K1 1620 aa21.11■□□□□ 0.97
HERC1-214ENST00000561400 DNAJC5BQ9UF47 199 aa21.08■□□□□ 0.97
HERC1-214ENST00000561400 RSF1Q96T23 1441 aaPredicted RBP21.07■□□□□ 0.96
HERC1-214ENST00000561400 WIZO95785 1651 aa20.99■□□□□ 0.95
HERC1-214ENST00000561400 PEG3Q9GZU2 1588 aa20.98■□□□□ 0.95
HERC1-214ENST00000561400 ATAD2BQ9ULI0 1458 aa20.98■□□□□ 0.95
HERC1-214ENST00000561400 SMARCA2P51531 1590 aa20.95■□□□□ 0.94
HERC1-214ENST00000561400 NCAPD3P42695 1498 aa20.89■□□□□ 0.94
HERC1-214ENST00000561400 SUPT5HO00267 1087 aaKnown RBP20.86■□□□□ 0.93
HERC1-214ENST00000561400 HMGXB3Q12766 1538 aa20.82■□□□□ 0.92
HERC1-214ENST00000561400 BAZ1BQ9UIG0 1483 aaKnown RBP20.82■□□□□ 0.92
HERC1-214ENST00000561400 TOP2AP11388 1531 aaKnown RBP20.74■□□□□ 0.91
HERC1-214ENST00000561400 CCDC88BA6NC98 1476 aa20.52■□□□□ 0.87
HERC1-214ENST00000561400 NESP48681 1621 aa20.32■□□□□ 0.84
HERC1-214ENST00000561400 CADPSQ9ULU8 1353 aa20.31■□□□□ 0.84
HERC1-214ENST00000561400 LAMC3Q9Y6N6 1575 aa20.28■□□□□ 0.84
HERC1-214ENST00000561400 CFTRP13569 1480 aa20.28■□□□□ 0.84
HERC1-214ENST00000561400 PRDM2Q13029 1718 aa20.19■□□□□ 0.82
HERC1-214ENST00000561400 PDS5BQ9NTI5 1447 aa20.11■□□□□ 0.81
HERC1-214ENST00000561400 KIF21AQ7Z4S6 1674 aa20.1■□□□□ 0.81
HERC1-214ENST00000561400 FANCD2Q9BXW9 1451 aa20.09■□□□□ 0.81
HERC1-214ENST00000561400 ERCC6Q03468 1493 aa20.03■□□□□ 0.8
HERC1-214ENST00000561400 CEP164Q9UPV0 1460 aa20.01■□□□□ 0.79
HERC1-214ENST00000561400 ABCC8Q09428 1581 aa19.92■□□□□ 0.78
HERC1-214ENST00000561400 THOC2Q8NI27 1593 aaKnown RBP19.9■□□□□ 0.78
HERC1-214ENST00000561400 MRC2Q9UBG0 1479 aa19.89■□□□□ 0.78
HERC1-214ENST00000561400 URB2Q14146 1524 aaKnown RBP19.88■□□□□ 0.77
HERC1-214ENST00000561400 WRNQ14191 1432 aaPredicted RBP eCLIP19.84■□□□□ 0.77
HERC1-214ENST00000561400 CUX1P39880 1505 aa19.83■□□□□ 0.77
HERC1-214ENST00000561400 WDR62O43379 1518 aa19.82■□□□□ 0.76
HERC1-214ENST00000561400 TOPBP1Q92547 1522 aa19.82■□□□□ 0.76
HERC1-214ENST00000561400 DNMBPQ6XZF7 1577 aa19.82■□□□□ 0.76
HERC1-214ENST00000561400 SYNJ1O43426 1573 aa19.8■□□□□ 0.76
HERC1-214ENST00000561400 TOP2BQ02880 1626 aa19.76■□□□□ 0.75
HERC1-214ENST00000561400 BIVM-ERCC5R4GMW8 1640 aa19.76■□□□□ 0.75
HERC1-214ENST00000561400 CHIC1Q5VXU3 224 aa19.71■□□□□ 0.75
HERC1-214ENST00000561400 FGD5Q6ZNL6 1462 aa19.69■□□□□ 0.74
HERC1-214ENST00000561400 POLA1P09884 1462 aaPredicted RBP19.68■□□□□ 0.74
HERC1-214ENST00000561400 CUX2O14529 1486 aa19.65■□□□□ 0.74
HERC1-214ENST00000561400 TRIM41Q8WV44 630 aa19.65■□□□□ 0.74
HERC1-214ENST00000561400 RAD54L2Q9Y4B4 1467 aa19.61■□□□□ 0.73
HERC1-214ENST00000561400 SOGA1O94964 1423 aa19.6■□□□□ 0.73
HERC1-214ENST00000561400 PELP1Q8IZL8 1130 aaKnown RBP19.59■□□□□ 0.73
HERC1-214ENST00000561400 TARBP1Q13395 1621 aaKnown RBP19.59■□□□□ 0.73
HERC1-214ENST00000561400 IFT140Q96RY7 1462 aa19.56■□□□□ 0.72
HERC1-214ENST00000561400 WDR97A6NE52 1622 aa19.53■□□□□ 0.72
HERC1-214ENST00000561400 ABCA10Q8WWZ4 1543 aa19.5■□□□□ 0.71
HERC1-214ENST00000561400 ZNF608Q9ULD9 1512 aaPredicted RBP19.49■□□□□ 0.71
HERC1-214ENST00000561400 TDRD9Q8NDG6 1382 aaKnown RBP19.46■□□□□ 0.71
HERC1-214ENST00000561400 AQRO60306 1485 aaKnown RBP eCLIP19.43■□□□□ 0.72e-6■■■□□ 18.1
HERC1-214ENST00000561400 EIF4G3O43432 1585 aaKnown RBP19.42■□□□□ 0.7
HERC1-214ENST00000561400 ABCA5Q8WWZ7 1642 aa19.41■□□□□ 0.7
HERC1-214ENST00000561400 MYT1Q01538 1121 aa19.41■□□□□ 0.7
HERC1-214ENST00000561400 RUSC2Q8N2Y8 1516 aa19.4■□□□□ 0.7
HERC1-214ENST00000561400 GAPVD1Q14C86 1478 aa19.38■□□□□ 0.69
HERC1-214ENST00000561400 KIF27Q86VH2 1401 aa19.37■□□□□ 0.69
HERC1-214ENST00000561400 PBRM1Q86U86 1689 aa19.34■□□□□ 0.69
HERC1-214ENST00000561400 GRIN2BQ13224 1484 aa19.3■□□□□ 0.68
HERC1-214ENST00000561400 FAM9AQ8IZU1 332 aaPredicted RBP19.28■□□□□ 0.68
HERC1-214ENST00000561400 ERICH3Q5RHP9 1530 aa19.27■□□□□ 0.68
HERC1-214ENST00000561400 IGF1RP08069 1367 aa19.27■□□□□ 0.68
HERC1-214ENST00000561400 EEA1Q15075 1411 aa19.25■□□□□ 0.67
HERC1-214ENST00000561400 SNAPC4Q5SXM2 1469 aa19.24■□□□□ 0.67
HERC1-214ENST00000561400 CSRNP3Q8WYN3 585 aa19.21■□□□□ 0.67
HERC1-214ENST00000561400 MAGI1Q96QZ7 1491 aaPredicted RBP19.2■□□□□ 0.66
HERC1-214ENST00000561400 ADAMTS12P58397 1594 aa19.19■□□□□ 0.66
HERC1-214ENST00000561400 CUL7Q14999 1698 aa19.18■□□□□ 0.66
HERC1-214ENST00000561400 CARMIL1Q5VZK9 1371 aa19.16■□□□□ 0.66
HERC1-214ENST00000561400 FHAD1B1AJZ9 1412 aa19.15■□□□□ 0.66
HERC1-214ENST00000561400 SYNJ2O15056 1496 aa19.13■□□□□ 0.65
HERC1-214ENST00000561400 PRXQ9BXM0 1461 aa19.12■□□□□ 0.65
HERC1-214ENST00000561400 CHD1O14646 1710 aa19.12■□□□□ 0.65
HERC1-214ENST00000561400 FBLN2P98095 1184 aa19.1■□□□□ 0.65
HERC1-214ENST00000561400 CHMP7Q8WUX9 453 aaPredicted RBP19.09■□□□□ 0.65
HERC1-214ENST00000561400 RAPGEF2Q9Y4G8 1499 aa19.08■□□□□ 0.64
HERC1-214ENST00000561400 GRIN2AQ12879 1464 aa19.07■□□□□ 0.64
HERC1-214ENST00000561400 KIF21BO75037 1637 aa19.06■□□□□ 0.64
HERC1-214ENST00000561400 EHMT2Q96KQ7 1210 aa19.02■□□□□ 0.64
HERC1-214ENST00000561400 CEP170Q5SW79 1584 aa18.98■□□□□ 0.63
HERC1-214ENST00000561400 GOLGA3Q08378 1498 aa18.97■□□□□ 0.63
HERC1-214ENST00000561400 NUP160Q12769 1436 aa18.97■□□□□ 0.63
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