RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 RIMBP3CA6NJZ7 1639 aa19.87■□□□□ 0.77
RABGGTA-218ENST00000560777 RIMBP3BA6NNM3 1639 aa19.87■□□□□ 0.77
RABGGTA-218ENST00000560777 RIMBP3Q9UFD9 1639 aa19.87■□□□□ 0.77
RABGGTA-218ENST00000560777 KIAA0586Q9BVV6 1533 aa19.86■□□□□ 0.77
RABGGTA-218ENST00000560777 SHROOM2Q13796 1616 aa19.8■□□□□ 0.76
RABGGTA-218ENST00000560777 CYB5RLQ6IPT4 315 aa19.77■□□□□ 0.76
RABGGTA-218ENST00000560777 PRG4Q92954 1404 aaPredicted RBP19.76■□□□□ 0.75
RABGGTA-218ENST00000560777 ERCC6L2Q5T890 1561 aa19.76■□□□□ 0.75
RABGGTA-218ENST00000560777 ARAP1Q96P48 1450 aa19.74■□□□□ 0.75
RABGGTA-218ENST00000560777 IQGAP2Q13576 1575 aa19.72■□□□□ 0.75
RABGGTA-218ENST00000560777 KIF21BO75037 1637 aa19.69■□□□□ 0.74
RABGGTA-218ENST00000560777 EHMT2Q96KQ7 1210 aa19.67■□□□□ 0.74
RABGGTA-218ENST00000560777 CTTNBP2Q8WZ74 1663 aa19.66■□□□□ 0.74
RABGGTA-218ENST00000560777 UGGT2Q9NYU1 1516 aa19.64■□□□□ 0.73
RABGGTA-218ENST00000560777 DISP1Q96F81 1524 aa19.62■□□□□ 0.73
RABGGTA-218ENST00000560777 CARMIL2Q6F5E8 1435 aa19.62■□□□□ 0.73
RABGGTA-218ENST00000560777 UBTFP17480 764 aaKnown RBP19.62■□□□□ 0.73
RABGGTA-218ENST00000560777 GOLGA3Q08378 1498 aa19.61■□□□□ 0.73
RABGGTA-218ENST00000560777 TNIKQ9UKE5 1360 aa19.57■□□□□ 0.72
RABGGTA-218ENST00000560777 PTPRGP23470 1445 aa19.56■□□□□ 0.72
RABGGTA-218ENST00000560777 TTBK1Q5TCY1 1321 aaPredicted RBP19.55■□□□□ 0.72
RABGGTA-218ENST00000560777 RANGAP1P46060 587 aaPredicted RBP19.54■□□□□ 0.72
RABGGTA-218ENST00000560777 KIAA0556O60303 1618 aa19.53■□□□□ 0.72
RABGGTA-218ENST00000560777 P3H3Q8IVL6 736 aa19.51■□□□□ 0.71
RABGGTA-218ENST00000560777 SAMD9Q5K651 1589 aa19.45■□□□□ 0.7
RABGGTA-218ENST00000560777 LOC105371045A0A1W2PR82 267 aa19.44■□□□□ 0.7
RABGGTA-218ENST00000560777 UACAQ9BZF9 1416 aa19.42■□□□□ 0.7
RABGGTA-218ENST00000560777 ADCY10Q96PN6 1610 aa19.41■□□□□ 0.7
RABGGTA-218ENST00000560777 NPM1P06748 294 aaKnown RBP eCLIP19.39■□□□□ 0.69
RABGGTA-218ENST00000560777 UHRF1BP1LA0JNW5 1464 aa19.38■□□□□ 0.69
RABGGTA-218ENST00000560777 EFCAB5A4FU69 1503 aa19.38■□□□□ 0.69
RABGGTA-218ENST00000560777 FHOD3Q2V2M9 1422 aa19.38■□□□□ 0.69
RABGGTA-218ENST00000560777 PLB1Q6P1J6 1458 aa19.37■□□□□ 0.69
RABGGTA-218ENST00000560777 ARHGAP35Q9NRY4 1499 aa19.36■□□□□ 0.69
RABGGTA-218ENST00000560777 ABCC2Q92887 1545 aa19.35■□□□□ 0.69
RABGGTA-218ENST00000560777 ABCA8O94911 1581 aa19.33■□□□□ 0.69
RABGGTA-218ENST00000560777 TRHP20396 242 aaPredicted RBP19.3■□□□□ 0.68
RABGGTA-218ENST00000560777 KDM5BQ9UGL1 1544 aa19.29■□□□□ 0.68
RABGGTA-218ENST00000560777 CLIP1P30622 1438 aa19.28■□□□□ 0.68
RABGGTA-218ENST00000560777 MAPKBP1O60336 1514 aa19.25■□□□□ 0.67
RABGGTA-218ENST00000560777 RAPGEF6Q8TEU7 1601 aa19.23■□□□□ 0.67
RABGGTA-218ENST00000560777 ARID3CA6NKF2 412 aa19.23■□□□□ 0.67
RABGGTA-218ENST00000560777 CEP162Q5TB80 1403 aa19.23■□□□□ 0.67
RABGGTA-218ENST00000560777 FMN1Q68DA7 1419 aa19.23■□□□□ 0.67
RABGGTA-218ENST00000560777 ASXL2Q76L83 1435 aa19.22■□□□□ 0.67
RABGGTA-218ENST00000560777 ATP10BO94823 1461 aa19.22■□□□□ 0.67
RABGGTA-218ENST00000560777 ZCCHC11Q5TAX3 1644 aaKnown RBP19.22■□□□□ 0.67
RABGGTA-218ENST00000560777 NUP153P49790 1475 aaKnown RBP19.2■□□□□ 0.66
RABGGTA-218ENST00000560777 ABCC10Q5T3U5 1492 aa19.18■□□□□ 0.66
RABGGTA-218ENST00000560777 FAM69CQ0P6D2 419 aa19.18■□□□□ 0.66
RABGGTA-218ENST00000560777 ATP1B4Q9UN42 357 aaPredicted RBP19.17■□□□□ 0.66
RABGGTA-218ENST00000560777 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.15■□□□□ 0.66
RABGGTA-218ENST00000560777 HNRNPUL2Q1KMD3 747 aaKnown RBP19.15■□□□□ 0.66
RABGGTA-218ENST00000560777 KIF13AQ9H1H9 1805 aa19.11■□□□□ 0.65
RABGGTA-218ENST00000560777 DIP2BQ9P265 1576 aa19.11■□□□□ 0.65
RABGGTA-218ENST00000560777 WDR7Q9Y4E6 1490 aa19.11■□□□□ 0.65
RABGGTA-218ENST00000560777 CASKIN1Q8WXD9 1431 aa19.11■□□□□ 0.65
RABGGTA-218ENST00000560777 KCNH8Q96L42 1107 aa19.11■□□□□ 0.65
RABGGTA-218ENST00000560777 EPRSP07814 1512 aaKnown RBP19.1■□□□□ 0.65
RABGGTA-218ENST00000560777 HECW1Q76N89 1606 aa19.08■□□□□ 0.65
RABGGTA-218ENST00000560777 PLEKHD1A6NEE1 506 aa19.08■□□□□ 0.64
RABGGTA-218ENST00000560777 CDK13Q14004 1512 aaKnown RBP19.07■□□□□ 0.64
RABGGTA-218ENST00000560777 PCF11O94913 1555 aaKnown RBP19.06■□□□□ 0.64
RABGGTA-218ENST00000560777 GLI2P10070 1586 aa19.06■□□□□ 0.64
RABGGTA-218ENST00000560777 FYCO1Q9BQS8 1478 aa19.04■□□□□ 0.64
RABGGTA-218ENST00000560777 LRRIQ1Q96JM4 1722 aa19.02■□□□□ 0.63
RABGGTA-218ENST00000560777 CDK11AQ9UQ88 783 aaPredicted RBP19.01■□□□□ 0.63
RABGGTA-218ENST00000560777 VPS8Q8N3P4 1428 aa18.99■□□□□ 0.63
RABGGTA-218ENST00000560777 CCDC18Q5T9S5 1454 aa18.98■□□□□ 0.63
RABGGTA-218ENST00000560777 CD109Q6YHK3 1445 aa18.96■□□□□ 0.63
RABGGTA-218ENST00000560777 MAP3K4Q9Y6R4 1608 aa18.96■□□□□ 0.63
RABGGTA-218ENST00000560777 TSPOAP1O95153 1857 aa18.95■□□□□ 0.62
RABGGTA-218ENST00000560777 TROQ12816 1431 aaPredicted RBP18.93■□□□□ 0.62
RABGGTA-218ENST00000560777 ABCA9Q8IUA7 1624 aa18.92■□□□□ 0.62
RABGGTA-218ENST00000560777 PPRC1Q5VV67 1664 aaKnown RBP18.92■□□□□ 0.62
RABGGTA-218ENST00000560777 CFAP43Q8NDM7 1665 aa18.91■□□□□ 0.62
RABGGTA-218ENST00000560777 MAGI3Q5TCQ9 1506 aa18.9■□□□□ 0.62
RABGGTA-218ENST00000560777 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.9■□□□□ 0.62
RABGGTA-218ENST00000560777 TEX14Q8IWB6 1497 aa18.86■□□□□ 0.61
RABGGTA-218ENST00000560777 KIF14Q15058 1648 aa18.85■□□□□ 0.61
RABGGTA-218ENST00000560777 TTC37Q6PGP7 1564 aa18.84■□□□□ 0.61
RABGGTA-218ENST00000560777 MTUS2Q5JR59 1369 aa18.83■□□□□ 0.61
RABGGTA-218ENST00000560777 TIAM1Q13009 1591 aa18.81■□□□□ 0.6
RABGGTA-218ENST00000560777 PLCH2O75038 1416 aa18.81■□□□□ 0.6
RABGGTA-218ENST00000560777 MAP3K1Q13233 1512 aa18.8■□□□□ 0.6
RABGGTA-218ENST00000560777 COL17A1Q9UMD9 1497 aaPredicted RBP18.8■□□□□ 0.6
RABGGTA-218ENST00000560777 KANK4Q5T7N3 995 aaPredicted RBP18.8■□□□□ 0.6
RABGGTA-218ENST00000560777 APLP2Q06481 763 aa18.78■□□□□ 0.6
RABGGTA-218ENST00000560777 PHLDB1Q86UU1 1377 aa18.78■□□□□ 0.6
RABGGTA-218ENST00000560777 NEO1Q92859 1461 aa18.77■□□□□ 0.59
RABGGTA-218ENST00000560777 KDM6BO15054 1643 aa18.76■□□□□ 0.59
RABGGTA-218ENST00000560777 LRRC9Q6ZRR7 1453 aa18.76■□□□□ 0.59
RABGGTA-218ENST00000560777 EHBP1L1Q8N3D4 1523 aa18.75■□□□□ 0.59
RABGGTA-218ENST00000560777 EFCAB2Q5VUJ9 269 aa18.75■□□□□ 0.59
RABGGTA-218ENST00000560777 FANCAO15360 1455 aa18.75■□□□□ 0.59
RABGGTA-218ENST00000560777 ARAP3Q8WWN8 1544 aa18.74■□□□□ 0.59
RABGGTA-218ENST00000560777 AKNAQ7Z591 1439 aa18.74■□□□□ 0.59
RABGGTA-218ENST00000560777 MYO5CQ9NQX4 1742 aa18.73■□□□□ 0.59
RABGGTA-218ENST00000560777 GPATCH8Q9UKJ3 1502 aaKnown RBP18.73■□□□□ 0.59
RABGGTA-218ENST00000560777 CCNB3Q8WWL7 1395 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms