RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 IGF1RP08069 1367 aa31.35■■■□□ 2.61
RPL28-210ENST00000560583 JPH4Q96JJ6 628 aa31.29■■■□□ 2.6
RPL28-210ENST00000560583 KIAA0586Q9BVV6 1533 aa31.24■■■□□ 2.59
RPL28-210ENST00000560583 KIF13AQ9H1H9 1805 aa31.18■■■□□ 2.58
RPL28-210ENST00000560583 CARMIL1Q5VZK9 1371 aa31.13■■■□□ 2.57
RPL28-210ENST00000560583 ADCY10Q96PN6 1610 aa31.13■■■□□ 2.57
RPL28-210ENST00000560583 MAPKBP1O60336 1514 aa31.03■■■□□ 2.56
RPL28-210ENST00000560583 IQGAP2Q13576 1575 aa31.02■■■□□ 2.56
RPL28-210ENST00000560583 DIP2BQ9P265 1576 aa30.95■■■□□ 2.54
RPL28-210ENST00000560583 ABCC10Q5T3U5 1492 aa30.93■■■□□ 2.54
RPL28-210ENST00000560583 RAPGEF2Q9Y4G8 1499 aa30.9■■■□□ 2.54
RPL28-210ENST00000560583 DISP1Q96F81 1524 aa30.87■■■□□ 2.53
RPL28-210ENST00000560583 PTPRGP23470 1445 aa30.86■■■□□ 2.53
RPL28-210ENST00000560583 CARMIL2Q6F5E8 1435 aa30.86■■■□□ 2.53
RPL28-210ENST00000560583 TNIKQ9UKE5 1360 aa30.84■■■□□ 2.53
RPL28-210ENST00000560583 NPM1P06748 294 aaKnown RBP eCLIP30.82■■■□□ 2.52
RPL28-210ENST00000560583 UGGT2Q9NYU1 1516 aa30.82■■■□□ 2.52
RPL28-210ENST00000560583 CTTNBP2Q8WZ74 1663 aa30.8■■■□□ 2.52
RPL28-210ENST00000560583 KIAA0556O60303 1618 aa30.77■■■□□ 2.52
RPL28-210ENST00000560583 FAM69CQ0P6D2 419 aa30.77■■■□□ 2.52
RPL28-210ENST00000560583 ABCC2Q92887 1545 aa30.77■■■□□ 2.52
RPL28-210ENST00000560583 UHRF1BP1LA0JNW5 1464 aa30.73■■■□□ 2.51
RPL28-210ENST00000560583 TTBK1Q5TCY1 1321 aaPredicted RBP30.73■■■□□ 2.51
RPL28-210ENST00000560583 TSPOAP1O95153 1857 aa30.7■■■□□ 2.5
RPL28-210ENST00000560583 UACAQ9BZF9 1416 aa30.67■■■□□ 2.5
RPL28-210ENST00000560583 PRXQ9BXM0 1461 aa30.66■■■□□ 2.5
RPL28-210ENST00000560583 ASXL2Q76L83 1435 aa30.63■■■□□ 2.49
RPL28-210ENST00000560583 KDM6BO15054 1643 aa30.6■■■□□ 2.49
RPL28-210ENST00000560583 ZCCHC11Q5TAX3 1644 aaKnown RBP30.6■■■□□ 2.49
RPL28-210ENST00000560583 PPRC1Q5VV67 1664 aaKnown RBP30.6■■■□□ 2.49
RPL28-210ENST00000560583 KDM5BQ9UGL1 1544 aa30.6■■■□□ 2.49
RPL28-210ENST00000560583 GLI2P10070 1586 aa30.58■■■□□ 2.49
RPL28-210ENST00000560583 PLB1Q6P1J6 1458 aa30.57■■■□□ 2.48
RPL28-210ENST00000560583 GOLGA3Q08378 1498 aa30.5■■■□□ 2.47
RPL28-210ENST00000560583 AEBP2Q6ZN18 517 aaPredicted RBP30.48■■■□□ 2.47
RPL28-210ENST00000560583 MAP3K4Q9Y6R4 1608 aa30.47■■■□□ 2.47
RPL28-210ENST00000560583 ABCA8O94911 1581 aa30.47■■■□□ 2.47
RPL28-210ENST00000560583 EPRSP07814 1512 aaKnown RBP30.47■■■□□ 2.47
RPL28-210ENST00000560583 WDR7Q9Y4E6 1490 aa30.37■■■□□ 2.45
RPL28-210ENST00000560583 SAMD9Q5K651 1589 aa30.34■■■□□ 2.45
RPL28-210ENST00000560583 CSRNP3Q8WYN3 585 aa30.31■■■□□ 2.44
RPL28-210ENST00000560583 EEA1Q15075 1411 aa30.29■■■□□ 2.44
RPL28-210ENST00000560583 COL17A1Q9UMD9 1497 aaPredicted RBP30.27■■■□□ 2.44
RPL28-210ENST00000560583 TEX14Q8IWB6 1497 aa30.25■■■□□ 2.43
RPL28-210ENST00000560583 CFAP43Q8NDM7 1665 aa30.24■■■□□ 2.43
RPL28-210ENST00000560583 P3H3Q8IVL6 736 aa30.17■■■□□ 2.42
RPL28-210ENST00000560583 KIF21BO75037 1637 aa30.16■■■□□ 2.42
RPL28-210ENST00000560583 RAPGEF6Q8TEU7 1601 aa30.16■■■□□ 2.42
RPL28-210ENST00000560583 MAGI3Q5TCQ9 1506 aa30.14■■■□□ 2.42
RPL28-210ENST00000560583 KDM4FA0A1W2PPD8 638 aa30.14■■■□□ 2.42
RPL28-210ENST00000560583 ATP10BO94823 1461 aa30.13■■■□□ 2.41
RPL28-210ENST00000560583 CD109Q6YHK3 1445 aa30.1■■■□□ 2.41
RPL28-210ENST00000560583 ARID3CA6NKF2 412 aa30.06■■■□□ 2.4
RPL28-210ENST00000560583 FAM9AQ8IZU1 332 aaPredicted RBP30.06■■■□□ 2.4
RPL28-210ENST00000560583 KCNH8Q96L42 1107 aa30.06■■■□□ 2.4
RPL28-210ENST00000560583 FHOD3Q2V2M9 1422 aa30.05■■■□□ 2.4
RPL28-210ENST00000560583 ABCA9Q8IUA7 1624 aa30.04■■■□□ 2.4
RPL28-210ENST00000560583 NUP153P49790 1475 aaKnown RBP30.04■■■□□ 2.4
RPL28-210ENST00000560583 ADGRL1O94910 1474 aa30.01■■■□□ 2.4
RPL28-210ENST00000560583 EFCAB5A4FU69 1503 aa30■■■□□ 2.39
RPL28-210ENST00000560583 RANGAP1P46060 587 aaPredicted RBP29.95■■■□□ 2.39
RPL28-210ENST00000560583 ARAP3Q8WWN8 1544 aa29.91■■■□□ 2.38
RPL28-210ENST00000560583 CHIC1Q5VXU3 224 aa29.89■■■□□ 2.38
RPL28-210ENST00000560583 FRMPD1Q5SYB0 1578 aa29.8■■■□□ 2.36
RPL28-210ENST00000560583 NEO1Q92859 1461 aa29.79■■■□□ 2.36
RPL28-210ENST00000560583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.78■■■□□ 2.36
RPL28-210ENST00000560583 HNRNPUL2Q1KMD3 747 aaKnown RBP29.78■■■□□ 2.36
RPL28-210ENST00000560583 CDK13Q14004 1512 aaKnown RBP29.76■■■□□ 2.36
RPL28-210ENST00000560583 TTC37Q6PGP7 1564 aa29.76■■■□□ 2.35
RPL28-210ENST00000560583 PHLDB1Q86UU1 1377 aa29.75■■■□□ 2.35
RPL28-210ENST00000560583 ARHGAP35Q9NRY4 1499 aa29.74■■■□□ 2.35
RPL28-210ENST00000560583 EHMT2Q96KQ7 1210 aa29.74■■■□□ 2.35
RPL28-210ENST00000560583 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.74■■■□□ 2.35
RPL28-210ENST00000560583 HECW1Q76N89 1606 aa29.69■■■□□ 2.34
RPL28-210ENST00000560583 UBTFP17480 764 aaKnown RBP29.68■■■□□ 2.34
RPL28-210ENST00000560583 RICTORQ6R327 1708 aa29.67■■■□□ 2.34
RPL28-210ENST00000560583 CFAP74Q9C0B2 1584 aa29.66■■■□□ 2.34
RPL28-210ENST00000560583 PLEKHD1A6NEE1 506 aa29.66■■■□□ 2.34
RPL28-210ENST00000560583 FMN1Q68DA7 1419 aa29.64■■■□□ 2.34
RPL28-210ENST00000560583 RAPGEF3O95398 923 aa29.64■■■□□ 2.34
RPL28-210ENST00000560583 LRRIQ1Q96JM4 1722 aa29.64■■■□□ 2.34
RPL28-210ENST00000560583 FANCAO15360 1455 aa29.61■■■□□ 2.33
RPL28-210ENST00000560583 ARHGEF40Q8TER5 1519 aa29.6■■■□□ 2.33
RPL28-210ENST00000560583 HECW2Q9P2P5 1572 aa29.6■■■□□ 2.33
RPL28-210ENST00000560583 ADAMTSL3P82987 1691 aa29.58■■■□□ 2.33
RPL28-210ENST00000560583 AKNAQ7Z591 1439 aa29.57■■■□□ 2.32
RPL28-210ENST00000560583 KIF14Q15058 1648 aa29.55■■■□□ 2.32
RPL28-210ENST00000560583 DENND4BO75064 1496 aaPredicted RBP29.55■■■□□ 2.32
RPL28-210ENST00000560583 BCORL1Q5H9F3 1711 aa29.54■■■□□ 2.32
RPL28-210ENST00000560583 ZMYM4Q5VZL5 1548 aa29.53■■■□□ 2.32
RPL28-210ENST00000560583 MYO5CQ9NQX4 1742 aa29.52■■■□□ 2.32
RPL28-210ENST00000560583 PCF11O94913 1555 aaKnown RBP29.5■■■□□ 2.31
RPL28-210ENST00000560583 SIGLEC1Q9BZZ2 1709 aa29.48■■■□□ 2.31
RPL28-210ENST00000560583 PLCH2O75038 1416 aa29.47■■■□□ 2.31
RPL28-210ENST00000560583 MADDQ8WXG6 1647 aa29.46■■■□□ 2.31
RPL28-210ENST00000560583 ATP1B4Q9UN42 357 aaPredicted RBP29.44■■■□□ 2.3
RPL28-210ENST00000560583 TROQ12816 1431 aaPredicted RBP29.43■■■□□ 2.3
RPL28-210ENST00000560583 PTPRMP28827 1452 aa29.42■■■□□ 2.3
RPL28-210ENST00000560583 ZFYVE16Q7Z3T8 1539 aa29.42■■■□□ 2.3
RPL28-210ENST00000560583 POGZQ7Z3K3 1410 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms