RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 TNIKQ9UKE5 1360 aa22.17■■□□□ 1.14
HMBOX1-213ENST00000560269 UBTFP17480 764 aaKnown RBP22.17■■□□□ 1.14
HMBOX1-213ENST00000560269 KIAA0586Q9BVV6 1533 aa22.12■■□□□ 1.13
HMBOX1-213ENST00000560269 IQGAP2Q13576 1575 aa22.09■■□□□ 1.13
HMBOX1-213ENST00000560269 CLASP1Q7Z460 1538 aa22.07■■□□□ 1.12
HMBOX1-213ENST00000560269 OSCARQ8IYS5 282 aa22.03■■□□□ 1.12
HMBOX1-213ENST00000560269 UGGT2Q9NYU1 1516 aa22■■□□□ 1.11
HMBOX1-213ENST00000560269 SHROOM2Q13796 1616 aa21.98■■□□□ 1.11
HMBOX1-213ENST00000560269 CEP162Q5TB80 1403 aa21.98■■□□□ 1.11
HMBOX1-213ENST00000560269 JPH4Q96JJ6 628 aa21.95■■□□□ 1.1
HMBOX1-213ENST00000560269 CLIP1P30622 1438 aa21.94■■□□□ 1.1
HMBOX1-213ENST00000560269 EFCAB5A4FU69 1503 aa21.94■■□□□ 1.1
HMBOX1-213ENST00000560269 SAMD9Q5K651 1589 aa21.94■■□□□ 1.1
HMBOX1-213ENST00000560269 ARHGAP35Q9NRY4 1499 aa21.9■■□□□ 1.1
HMBOX1-213ENST00000560269 RANGAP1P46060 587 aaPredicted RBP21.89■■□□□ 1.09
HMBOX1-213ENST00000560269 DISP1Q96F81 1524 aa21.89■■□□□ 1.09
HMBOX1-213ENST00000560269 KIAA0556O60303 1618 aa21.88■■□□□ 1.09
HMBOX1-213ENST00000560269 PRG4Q92954 1404 aaPredicted RBP21.86■■□□□ 1.09
HMBOX1-213ENST00000560269 CARMIL2Q6F5E8 1435 aa21.85■■□□□ 1.09
HMBOX1-213ENST00000560269 ARAP1Q96P48 1450 aa21.81■■□□□ 1.08
HMBOX1-213ENST00000560269 ERCC6L2Q5T890 1561 aa21.8■■□□□ 1.08
HMBOX1-213ENST00000560269 FHOD3Q2V2M9 1422 aa21.78■■□□□ 1.08
HMBOX1-213ENST00000560269 P3H3Q8IVL6 736 aa21.77■■□□□ 1.08
HMBOX1-213ENST00000560269 FMN1Q68DA7 1419 aa21.71■■□□□ 1.07
HMBOX1-213ENST00000560269 ARHGEF11O15085 1522 aa21.7■■□□□ 1.07
HMBOX1-213ENST00000560269 VPS8Q8N3P4 1428 aa21.69■■□□□ 1.06
HMBOX1-213ENST00000560269 PTPRGP23470 1445 aa21.67■■□□□ 1.06
HMBOX1-213ENST00000560269 RIMBP3CA6NJZ7 1639 aa21.66■■□□□ 1.06
HMBOX1-213ENST00000560269 RIMBP3BA6NNM3 1639 aa21.66■■□□□ 1.06
HMBOX1-213ENST00000560269 RIMBP3Q9UFD9 1639 aa21.66■■□□□ 1.06
HMBOX1-213ENST00000560269 PCF11O94913 1555 aaKnown RBP21.61■■□□□ 1.05
HMBOX1-213ENST00000560269 CASKIN1Q8WXD9 1431 aa21.61■■□□□ 1.05
HMBOX1-213ENST00000560269 ABCA8O94911 1581 aa21.61■■□□□ 1.05
HMBOX1-213ENST00000560269 RAPGEF6Q8TEU7 1601 aa21.6■■□□□ 1.05
HMBOX1-213ENST00000560269 FYCO1Q9BQS8 1478 aa21.59■■□□□ 1.05
HMBOX1-213ENST00000560269 PLB1Q6P1J6 1458 aa21.58■■□□□ 1.05
HMBOX1-213ENST00000560269 TTBK1Q5TCY1 1321 aaPredicted RBP21.58■■□□□ 1.05
HMBOX1-213ENST00000560269 UACAQ9BZF9 1416 aa21.56■■□□□ 1.04
HMBOX1-213ENST00000560269 HECW1Q76N89 1606 aa21.55■■□□□ 1.04
HMBOX1-213ENST00000560269 UHRF1BP1LA0JNW5 1464 aa21.53■■□□□ 1.04
HMBOX1-213ENST00000560269 ABCC2Q92887 1545 aa21.52■■□□□ 1.04
HMBOX1-213ENST00000560269 NUP153P49790 1475 aaKnown RBP21.52■■□□□ 1.03
HMBOX1-213ENST00000560269 LRRIQ1Q96JM4 1722 aa21.51■■□□□ 1.03
HMBOX1-213ENST00000560269 DNAJC5Q9H3Z4 198 aa21.5■■□□□ 1.03
HMBOX1-213ENST00000560269 ADCY10Q96PN6 1610 aa21.48■■□□□ 1.03
HMBOX1-213ENST00000560269 CCDC18Q5T9S5 1454 aa21.46■■□□□ 1.03
HMBOX1-213ENST00000560269 EPRSP07814 1512 aaKnown RBP21.46■■□□□ 1.03
HMBOX1-213ENST00000560269 MAP3K1Q13233 1512 aa21.46■■□□□ 1.03
HMBOX1-213ENST00000560269 CFAP43Q8NDM7 1665 aa21.45■■□□□ 1.02
HMBOX1-213ENST00000560269 ATP1B4Q9UN42 357 aaPredicted RBP21.45■■□□□ 1.02
HMBOX1-213ENST00000560269 TIAM1Q13009 1591 aa21.43■■□□□ 1.02
HMBOX1-213ENST00000560269 CYB5RLQ6IPT4 315 aa21.42■■□□□ 1.02
HMBOX1-213ENST00000560269 KDM5BQ9UGL1 1544 aa21.42■■□□□ 1.02
HMBOX1-213ENST00000560269 ATP10BO94823 1461 aa21.41■■□□□ 1.02
HMBOX1-213ENST00000560269 CDK13Q14004 1512 aaKnown RBP21.4■■□□□ 1.02
HMBOX1-213ENST00000560269 APLP2Q06481 763 aa21.39■■□□□ 1.01
HMBOX1-213ENST00000560269 ZCCHC11Q5TAX3 1644 aaKnown RBP21.39■■□□□ 1.01
HMBOX1-213ENST00000560269 ARID3CA6NKF2 412 aa21.35■■□□□ 1.01
HMBOX1-213ENST00000560269 LRRC9Q6ZRR7 1453 aa21.32■■□□□ 1
HMBOX1-213ENST00000560269 MAGI3Q5TCQ9 1506 aa21.3■■□□□ 1
HMBOX1-213ENST00000560269 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.3■■□□□ 1
HMBOX1-213ENST00000560269 HNRNPUL2Q1KMD3 747 aaKnown RBP21.3■■□□□ 1
HMBOX1-213ENST00000560269 CDK11AQ9UQ88 783 aaPredicted RBP21.29■■□□□ 1
HMBOX1-213ENST00000560269 NPM1P06748 294 aaKnown RBP eCLIP21.28■■□□□ 1
HMBOX1-213ENST00000560269 KANK4Q5T7N3 995 aaPredicted RBP21.28■■□□□ 1
HMBOX1-213ENST00000560269 EHBP1L1Q8N3D4 1523 aa21.28■■□□□ 1
HMBOX1-213ENST00000560269 MTUS2Q5JR59 1369 aa21.26■□□□□ 0.99
HMBOX1-213ENST00000560269 TROQ12816 1431 aaPredicted RBP21.26■□□□□ 0.99
HMBOX1-213ENST00000560269 PLEKHD1A6NEE1 506 aa21.25■□□□□ 0.99
HMBOX1-213ENST00000560269 MAPKBP1O60336 1514 aa21.24■□□□□ 0.99
HMBOX1-213ENST00000560269 ASXL2Q76L83 1435 aa21.21■□□□□ 0.99
HMBOX1-213ENST00000560269 SUPT6HQ7KZ85 1726 aaKnown RBP21.21■□□□□ 0.99
HMBOX1-213ENST00000560269 WDR7Q9Y4E6 1490 aa21.2■□□□□ 0.98
HMBOX1-213ENST00000560269 PPARGC1BQ86YN6 1023 aaKnown RBP21.19■□□□□ 0.98
HMBOX1-213ENST00000560269 KIF14Q15058 1648 aa21.18■□□□□ 0.98
HMBOX1-213ENST00000560269 NCOA2Q15596 1464 aa21.14■□□□□ 0.98
HMBOX1-213ENST00000560269 ABCC10Q5T3U5 1492 aa21.12■□□□□ 0.97
HMBOX1-213ENST00000560269 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.1■□□□□ 0.972e-7■■■□□ 16.2
HMBOX1-213ENST00000560269 KCNH8Q96L42 1107 aa21.09■□□□□ 0.97
HMBOX1-213ENST00000560269 ABCA9Q8IUA7 1624 aa21.08■□□□□ 0.97
HMBOX1-213ENST00000560269 TTC37Q6PGP7 1564 aa21.07■□□□□ 0.96
HMBOX1-213ENST00000560269 GLI2P10070 1586 aa21.06■□□□□ 0.96
HMBOX1-213ENST00000560269 PHLDB1Q86UU1 1377 aa21.06■□□□□ 0.96
HMBOX1-213ENST00000560269 DIP2BQ9P265 1576 aa21.06■□□□□ 0.96
HMBOX1-213ENST00000560269 CDC42BPAQ5VT25 1732 aa21.04■□□□□ 0.96
HMBOX1-213ENST00000560269 ITSN2Q9NZM3 1697 aa21.04■□□□□ 0.96
HMBOX1-213ENST00000560269 CCNB3Q8WWL7 1395 aa21.03■□□□□ 0.96
HMBOX1-213ENST00000560269 MYOM3Q5VTT5 1437 aa21.03■□□□□ 0.96
HMBOX1-213ENST00000560269 MYO5CQ9NQX4 1742 aa21.02■□□□□ 0.96
HMBOX1-213ENST00000560269 GPATCH8Q9UKJ3 1502 aaKnown RBP21.02■□□□□ 0.96
HMBOX1-213ENST00000560269 PREX2Q70Z35 1606 aa21.01■□□□□ 0.95
HMBOX1-213ENST00000560269 MAP3K4Q9Y6R4 1608 aa20.99■□□□□ 0.95
HMBOX1-213ENST00000560269 KIF13AQ9H1H9 1805 aa20.99■□□□□ 0.95
HMBOX1-213ENST00000560269 ARAP3Q8WWN8 1544 aa20.99■□□□□ 0.95
HMBOX1-213ENST00000560269 CDC42BPBQ9Y5S2 1711 aa20.98■□□□□ 0.95
HMBOX1-213ENST00000560269 MIA2Q96PC5 1412 aa20.98■□□□□ 0.95
HMBOX1-213ENST00000560269 PLCH2O75038 1416 aa20.97■□□□□ 0.95
HMBOX1-213ENST00000560269 FGD6Q6ZV73 1430 aa20.97■□□□□ 0.95
HMBOX1-213ENST00000560269 RRBP1Q9P2E9 1410 aaKnown RBP20.96■□□□□ 0.95
HMBOX1-213ENST00000560269 CD109Q6YHK3 1445 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms