RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 ERCC6L2Q5T890 1561 aa22.57■■□□□ 1.2
SMAD3-213ENST00000560175 KIAA0586Q9BVV6 1533 aa22.55■■□□□ 1.2
SMAD3-213ENST00000560175 PRG4Q92954 1404 aaPredicted RBP22.48■■□□□ 1.19
SMAD3-213ENST00000560175 RAPGEF2Q9Y4G8 1499 aa22.45■■□□□ 1.18
SMAD3-213ENST00000560175 PRXQ9BXM0 1461 aa22.39■■□□□ 1.17
SMAD3-213ENST00000560175 IQGAP2Q13576 1575 aa22.35■■□□□ 1.17
SMAD3-213ENST00000560175 CSRNP3Q8WYN3 585 aa22.29■■□□□ 1.16
SMAD3-213ENST00000560175 EEA1Q15075 1411 aa22.29■■□□□ 1.16
SMAD3-213ENST00000560175 UGGT2Q9NYU1 1516 aa22.28■■□□□ 1.16
SMAD3-213ENST00000560175 CHIC1Q5VXU3 224 aa22.28■■□□□ 1.16
SMAD3-213ENST00000560175 CARMIL2Q6F5E8 1435 aa22.25■■□□□ 1.15
SMAD3-213ENST00000560175 DISP1Q96F81 1524 aa22.25■■□□□ 1.15
SMAD3-213ENST00000560175 CTTNBP2Q8WZ74 1663 aa22.24■■□□□ 1.15
SMAD3-213ENST00000560175 TNIKQ9UKE5 1360 aa22.23■■□□□ 1.15
SMAD3-213ENST00000560175 TRHP20396 242 aaPredicted RBP22.22■■□□□ 1.15
SMAD3-213ENST00000560175 PTPRGP23470 1445 aa22.21■■□□□ 1.15
SMAD3-213ENST00000560175 ADCY10Q96PN6 1610 aa22.19■■□□□ 1.14
SMAD3-213ENST00000560175 KIAA0556O60303 1618 aa22.14■■□□□ 1.14
SMAD3-213ENST00000560175 MAPKBP1O60336 1514 aa22.11■■□□□ 1.13
SMAD3-213ENST00000560175 UHRF1BP1LA0JNW5 1464 aa22.11■■□□□ 1.13
SMAD3-213ENST00000560175 GOLGA3Q08378 1498 aa22.09■■□□□ 1.13
SMAD3-213ENST00000560175 NPM1P06748 294 aaKnown RBP eCLIP22.09■■□□□ 1.13
SMAD3-213ENST00000560175 UACAQ9BZF9 1416 aa22.06■■□□□ 1.12
SMAD3-213ENST00000560175 KIF21BO75037 1637 aa22.06■■□□□ 1.12
SMAD3-213ENST00000560175 KIF13AQ9H1H9 1805 aa22.06■■□□□ 1.12
SMAD3-213ENST00000560175 ABCC2Q92887 1545 aa22.05■■□□□ 1.12
SMAD3-213ENST00000560175 FAM9AQ8IZU1 332 aaPredicted RBP22.04■■□□□ 1.12
SMAD3-213ENST00000560175 ABCC10Q5T3U5 1492 aa22.03■■□□□ 1.12
SMAD3-213ENST00000560175 TTBK1Q5TCY1 1321 aaPredicted RBP22■■□□□ 1.11
SMAD3-213ENST00000560175 KDM5BQ9UGL1 1544 aa22■■□□□ 1.11
SMAD3-213ENST00000560175 SAMD9Q5K651 1589 aa21.98■■□□□ 1.11
SMAD3-213ENST00000560175 ABCA8O94911 1581 aa21.95■■□□□ 1.11
SMAD3-213ENST00000560175 DIP2BQ9P265 1576 aa21.95■■□□□ 1.11
SMAD3-213ENST00000560175 PLB1Q6P1J6 1458 aa21.93■■□□□ 1.1
SMAD3-213ENST00000560175 FAM69CQ0P6D2 419 aa21.92■■□□□ 1.1
SMAD3-213ENST00000560175 ASXL2Q76L83 1435 aa21.9■■□□□ 1.1
SMAD3-213ENST00000560175 ZCCHC11Q5TAX3 1644 aaKnown RBP21.89■■□□□ 1.09
SMAD3-213ENST00000560175 GLI2P10070 1586 aa21.87■■□□□ 1.09
SMAD3-213ENST00000560175 P3H3Q8IVL6 736 aa21.85■■□□□ 1.09
SMAD3-213ENST00000560175 EFCAB5A4FU69 1503 aa21.82■■□□□ 1.08
SMAD3-213ENST00000560175 EPRSP07814 1512 aaKnown RBP21.8■■□□□ 1.08
SMAD3-213ENST00000560175 UBTFP17480 764 aaKnown RBP21.79■■□□□ 1.08
SMAD3-213ENST00000560175 ATP10BO94823 1461 aa21.77■■□□□ 1.08
SMAD3-213ENST00000560175 WDR7Q9Y4E6 1490 aa21.77■■□□□ 1.07
SMAD3-213ENST00000560175 RAPGEF6Q8TEU7 1601 aa21.77■■□□□ 1.07
SMAD3-213ENST00000560175 FHOD3Q2V2M9 1422 aa21.76■■□□□ 1.07
SMAD3-213ENST00000560175 MAP3K4Q9Y6R4 1608 aa21.73■■□□□ 1.07
SMAD3-213ENST00000560175 TSPOAP1O95153 1857 aa21.73■■□□□ 1.07
SMAD3-213ENST00000560175 PPRC1Q5VV67 1664 aaKnown RBP21.73■■□□□ 1.07
SMAD3-213ENST00000560175 RANGAP1P46060 587 aaPredicted RBP21.72■■□□□ 1.07
SMAD3-213ENST00000560175 NUP153P49790 1475 aaKnown RBP21.71■■□□□ 1.07
SMAD3-213ENST00000560175 ARHGAP35Q9NRY4 1499 aa21.71■■□□□ 1.07
SMAD3-213ENST00000560175 EHMT2Q96KQ7 1210 aa21.68■■□□□ 1.06
SMAD3-213ENST00000560175 CFAP43Q8NDM7 1665 aa21.63■■□□□ 1.05
SMAD3-213ENST00000560175 FMN1Q68DA7 1419 aa21.62■■□□□ 1.05
SMAD3-213ENST00000560175 KCNH8Q96L42 1107 aa21.61■■□□□ 1.05
SMAD3-213ENST00000560175 KDM6BO15054 1643 aa21.61■■□□□ 1.05
SMAD3-213ENST00000560175 MAGI3Q5TCQ9 1506 aa21.6■■□□□ 1.05
SMAD3-213ENST00000560175 TEX14Q8IWB6 1497 aa21.59■■□□□ 1.05
SMAD3-213ENST00000560175 ARID3CA6NKF2 412 aa21.59■■□□□ 1.05
SMAD3-213ENST00000560175 CD109Q6YHK3 1445 aa21.58■■□□□ 1.05
SMAD3-213ENST00000560175 ABCA9Q8IUA7 1624 aa21.57■■□□□ 1.04
SMAD3-213ENST00000560175 COL17A1Q9UMD9 1497 aaPredicted RBP21.55■■□□□ 1.04
SMAD3-213ENST00000560175 PLEKHD1A6NEE1 506 aa21.53■■□□□ 1.04
SMAD3-213ENST00000560175 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.51■■□□□ 1.03
SMAD3-213ENST00000560175 HNRNPUL2Q1KMD3 747 aaKnown RBP21.51■■□□□ 1.03
SMAD3-213ENST00000560175 HECW1Q76N89 1606 aa21.51■■□□□ 1.03
SMAD3-213ENST00000560175 CDK13Q14004 1512 aaKnown RBP21.48■■□□□ 1.03
SMAD3-213ENST00000560175 CLIP1P30622 1438 aa21.47■■□□□ 1.03
SMAD3-213ENST00000560175 LRRIQ1Q96JM4 1722 aa21.46■■□□□ 1.03
SMAD3-213ENST00000560175 CASKIN1Q8WXD9 1431 aa21.46■■□□□ 1.03
SMAD3-213ENST00000560175 PHLDB1Q86UU1 1377 aa21.45■■□□□ 1.02
SMAD3-213ENST00000560175 ARAP3Q8WWN8 1544 aa21.44■■□□□ 1.02
SMAD3-213ENST00000560175 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.42■■□□□ 1.02
SMAD3-213ENST00000560175 NEO1Q92859 1461 aa21.4■■□□□ 1.02
SMAD3-213ENST00000560175 CDK11AQ9UQ88 783 aaPredicted RBP21.4■■□□□ 1.02
SMAD3-213ENST00000560175 PCF11O94913 1555 aaKnown RBP21.39■■□□□ 1.01
SMAD3-213ENST00000560175 ATP1B4Q9UN42 357 aaPredicted RBP21.38■■□□□ 1.01
SMAD3-213ENST00000560175 FYCO1Q9BQS8 1478 aa21.37■■□□□ 1.01
SMAD3-213ENST00000560175 CCDC18Q5T9S5 1454 aa21.36■■□□□ 1.01
SMAD3-213ENST00000560175 TTC37Q6PGP7 1564 aa21.36■■□□□ 1.01
SMAD3-213ENST00000560175 TROQ12816 1431 aaPredicted RBP21.35■■□□□ 1.01
SMAD3-213ENST00000560175 CEP162Q5TB80 1403 aa21.34■■□□□ 1.01
SMAD3-213ENST00000560175 LOC105371045A0A1W2PR82 267 aa21.33■■□□□ 1.01
SMAD3-213ENST00000560175 PLCH2O75038 1416 aa21.32■■□□□ 1
SMAD3-213ENST00000560175 KIF14Q15058 1648 aa21.29■■□□□ 1
SMAD3-213ENST00000560175 CFAP74Q9C0B2 1584 aa21.28■■□□□ 1
SMAD3-213ENST00000560175 FANCAO15360 1455 aa21.28■■□□□ 1
SMAD3-213ENST00000560175 AKNAQ7Z591 1439 aa21.28■■□□□ 1
SMAD3-213ENST00000560175 KDM4FA0A1W2PPD8 638 aa21.26■□□□□ 0.99
SMAD3-213ENST00000560175 MYO5CQ9NQX4 1742 aa21.25■□□□□ 0.99
SMAD3-213ENST00000560175 FRMPD1Q5SYB0 1578 aa21.24■□□□□ 0.99
SMAD3-213ENST00000560175 RAPGEF3O95398 923 aa21.24■□□□□ 0.99
SMAD3-213ENST00000560175 RICTORQ6R327 1708 aa21.23■□□□□ 0.99
SMAD3-213ENST00000560175 DENND4BO75064 1496 aaPredicted RBP21.21■□□□□ 0.99
SMAD3-213ENST00000560175 EFCAB2Q5VUJ9 269 aa21.2■□□□□ 0.98
SMAD3-213ENST00000560175 AEBP2Q6ZN18 517 aaPredicted RBP21.2■□□□□ 0.98
SMAD3-213ENST00000560175 CDC42BPBQ9Y5S2 1711 aa21.18■□□□□ 0.98
SMAD3-213ENST00000560175 ZMYM4Q5VZL5 1548 aa21.15■□□□□ 0.98
SMAD3-213ENST00000560175 ADGRL1O94910 1474 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms