RNA–Protein interactions for RNA: ENST00000560153.2

LINC00052-201, long intergenic non-protein coding RNA 52, humanhuman

TSL 2 BASIC

Gene LINC00052, Length 1,966 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00052-201ENST00000560153 ERICH3Q5RHP9 1530 aa17.09■□□□□ 0.33
LINC00052-201ENST00000560153 HNRNPUL2Q1KMD3 747 aaKnown RBP17.08■□□□□ 0.33
LINC00052-201ENST00000560153 MIER1Q8N108 512 aa17.08■□□□□ 0.33
LINC00052-201ENST00000560153 TOP2BQ02880 1626 aa17.08■□□□□ 0.32
LINC00052-201ENST00000560153 BIVM-ERCC5R4GMW8 1640 aa17.06■□□□□ 0.32
LINC00052-201ENST00000560153 RAPGEF2Q9Y4G8 1499 aa17.04■□□□□ 0.32
LINC00052-201ENST00000560153 NPM2Q86SE8 214 aaKnown RBP17.04■□□□□ 0.32
LINC00052-201ENST00000560153 YTHDC1Q96MU7 727 aaKnown RBP17.04■□□□□ 0.32
LINC00052-201ENST00000560153 NESP48681 1621 aa17.01■□□□□ 0.31
LINC00052-201ENST00000560153 TMEM132AQ24JP5 1023 aa17.01■□□□□ 0.31
LINC00052-201ENST00000560153 LAMC3Q9Y6N6 1575 aa16.97■□□□□ 0.31
LINC00052-201ENST00000560153 DHX57Q6P158 1386 aaKnown RBP16.95■□□□□ 0.3
LINC00052-201ENST00000560153 PRXQ9BXM0 1461 aa16.94■□□□□ 0.3
LINC00052-201ENST00000560153 CUX2O14529 1486 aa16.93■□□□□ 0.3
LINC00052-201ENST00000560153 PLEKHG5O94827 1062 aa16.91■□□□□ 0.3
LINC00052-201ENST00000560153 RRBP1Q9P2E9 1410 aaKnown RBP16.91■□□□□ 0.3
LINC00052-201ENST00000560153 ARAP1Q96P48 1450 aa16.91■□□□□ 0.3
LINC00052-201ENST00000560153 PDS5BQ9NTI5 1447 aa16.91■□□□□ 0.3
LINC00052-201ENST00000560153 FANCD2Q9BXW9 1451 aa16.89■□□□□ 0.29
LINC00052-201ENST00000560153 ADRA2BP18089 450 aa16.84■□□□□ 0.29
LINC00052-201ENST00000560153 C14orf37Q86TY3 774 aa16.83■□□□□ 0.28
LINC00052-201ENST00000560153 PRDM2Q13029 1718 aa16.82■□□□□ 0.28
LINC00052-201ENST00000560153 KIF27Q86VH2 1401 aa16.81■□□□□ 0.28
LINC00052-201ENST00000560153 MAP3K1Q13233 1512 aa16.79■□□□□ 0.28
LINC00052-201ENST00000560153 VSIG10Q8N0Z9 540 aa16.77■□□□□ 0.28
LINC00052-201ENST00000560153 CCNB3Q8WWL7 1395 aa16.77■□□□□ 0.27
LINC00052-201ENST00000560153 KDM2AQ9Y2K7 1162 aa16.76■□□□□ 0.27
LINC00052-201ENST00000560153 CUX1P39880 1505 aa16.74■□□□□ 0.27
LINC00052-201ENST00000560153 SUPT16HQ9Y5B9 1047 aaKnown RBP16.73■□□□□ 0.27
LINC00052-201ENST00000560153 ERCC6Q03468 1493 aa16.73■□□□□ 0.27
LINC00052-201ENST00000560153 KIF21AQ7Z4S6 1674 aa16.71■□□□□ 0.27
LINC00052-201ENST00000560153 ARHGAP35Q9NRY4 1499 aa16.7■□□□□ 0.26
LINC00052-201ENST00000560153 KANK4Q5T7N3 995 aaPredicted RBP16.7■□□□□ 0.26
LINC00052-201ENST00000560153 FBXO3Q9UK99 471 aa16.7■□□□□ 0.26
LINC00052-201ENST00000560153 URB2Q14146 1524 aaKnown RBP16.69■□□□□ 0.26
LINC00052-201ENST00000560153 MRC2Q9UBG0 1479 aa16.68■□□□□ 0.26
LINC00052-201ENST00000560153 TIAM1Q13009 1591 aa16.67■□□□□ 0.26
LINC00052-201ENST00000560153 TOPBP1Q92547 1522 aa16.67■□□□□ 0.26
LINC00052-201ENST00000560153 DNMBPQ6XZF7 1577 aa16.65■□□□□ 0.26
LINC00052-201ENST00000560153 MAPKBP1O60336 1514 aa16.62■□□□□ 0.25
LINC00052-201ENST00000560153 FKBP8Q14318 412 aa16.62■□□□□ 0.25
LINC00052-201ENST00000560153 CFAP43Q8NDM7 1665 aa16.61■□□□□ 0.25
LINC00052-201ENST00000560153 SETD5Q9C0A6 1442 aa16.61■□□□□ 0.25
LINC00052-201ENST00000560153 RAB3GAP2Q9H2M9 1393 aa16.61■□□□□ 0.25
LINC00052-201ENST00000560153 FBLN2P98095 1184 aa16.6■□□□□ 0.25
LINC00052-201ENST00000560153 WDR62O43379 1518 aa16.59■□□□□ 0.25
LINC00052-201ENST00000560153 FGD5Q6ZNL6 1462 aa16.59■□□□□ 0.25
LINC00052-201ENST00000560153 FHAD1B1AJZ9 1412 aa16.58■□□□□ 0.24
LINC00052-201ENST00000560153 THOC2Q8NI27 1593 aaKnown RBP16.57■□□□□ 0.24
LINC00052-201ENST00000560153 POLA1P09884 1462 aaPredicted RBP16.56■□□□□ 0.24
LINC00052-201ENST00000560153 LRRC9Q6ZRR7 1453 aa16.56■□□□□ 0.24
LINC00052-201ENST00000560153 TSHZ2Q9NRE2 1034 aa16.54■□□□□ 0.24
LINC00052-201ENST00000560153 RAD54L2Q9Y4B4 1467 aa16.52■□□□□ 0.23
LINC00052-201ENST00000560153 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.52■□□□□ 0.23
LINC00052-201ENST00000560153 IGF1RP08069 1367 aa16.49■□□□□ 0.23
LINC00052-201ENST00000560153 WDR97A6NE52 1622 aa16.48■□□□□ 0.23
LINC00052-201ENST00000560153 CCER2I3L3R5 266 aa16.48■□□□□ 0.23
LINC00052-201ENST00000560153 ANP32EQ9BTT0 268 aa16.48■□□□□ 0.23
LINC00052-201ENST00000560153 CARMIL1Q5VZK9 1371 aa16.47■□□□□ 0.23
LINC00052-201ENST00000560153 EFCAB5A4FU69 1503 aa16.46■□□□□ 0.23
LINC00052-201ENST00000560153 ITGAEP38570 1179 aa16.46■□□□□ 0.22
LINC00052-201ENST00000560153 ABCA10Q8WWZ4 1543 aa16.45■□□□□ 0.22
LINC00052-201ENST00000560153 AQRO60306 1485 aaKnown RBP eCLIP16.45■□□□□ 0.22
LINC00052-201ENST00000560153 IFT140Q96RY7 1462 aa16.45■□□□□ 0.22
LINC00052-201ENST00000560153 NEFLP07196 543 aa16.44■□□□□ 0.22
LINC00052-201ENST00000560153 PCF11O94913 1555 aaKnown RBP16.44■□□□□ 0.22
LINC00052-201ENST00000560153 FYCO1Q9BQS8 1478 aa16.43■□□□□ 0.22
LINC00052-201ENST00000560153 PHLDB1Q86UU1 1377 aa16.43■□□□□ 0.22
LINC00052-201ENST00000560153 TARBP1Q13395 1621 aaKnown RBP16.42■□□□□ 0.22
LINC00052-201ENST00000560153 TDRD9Q8NDG6 1382 aaKnown RBP16.41■□□□□ 0.22
LINC00052-201ENST00000560153 NPM3O75607 178 aaKnown RBP16.4■□□□□ 0.22
LINC00052-201ENST00000560153 PPP1R15AO75807 674 aaPredicted RBP16.4■□□□□ 0.22
LINC00052-201ENST00000560153 ANP32CO43423 234 aa16.38■□□□□ 0.21
LINC00052-201ENST00000560153 CUL7Q14999 1698 aa16.37■□□□□ 0.21
LINC00052-201ENST00000560153 DDX10Q13206 875 aaKnown RBP16.37■□□□□ 0.21
LINC00052-201ENST00000560153 CASKIN1Q8WXD9 1431 aa16.37■□□□□ 0.21
LINC00052-201ENST00000560153 CTTNBP2Q8WZ74 1663 aa16.37■□□□□ 0.21
LINC00052-201ENST00000560153 FAM50AQ14320 339 aaKnown RBP16.37■□□□□ 0.21
LINC00052-201ENST00000560153 ZNF608Q9ULD9 1512 aaPredicted RBP16.35■□□□□ 0.21
LINC00052-201ENST00000560153 GAPVD1Q14C86 1478 aa16.33■□□□□ 0.2
LINC00052-201ENST00000560153 KCNH8Q96L42 1107 aa16.32■□□□□ 0.2
LINC00052-201ENST00000560153 SIN3AQ96ST3 1273 aa16.31■□□□□ 0.2
LINC00052-201ENST00000560153 TONSLQ96HA7 1378 aa16.31■□□□□ 0.2
LINC00052-201ENST00000560153 FMN1Q68DA7 1419 aa16.31■□□□□ 0.2
LINC00052-201ENST00000560153 ABCA5Q8WWZ7 1642 aa16.29■□□□□ 0.2
LINC00052-201ENST00000560153 UACAQ9BZF9 1416 aa16.29■□□□□ 0.2
LINC00052-201ENST00000560153 FGD6Q6ZV73 1430 aa16.28■□□□□ 0.2
LINC00052-201ENST00000560153 CCDC18Q5T9S5 1454 aa16.28■□□□□ 0.2
LINC00052-201ENST00000560153 HFM1A2PYH4 1435 aa16.27■□□□□ 0.19
LINC00052-201ENST00000560153 PTPN23Q9H3S7 1636 aa16.26■□□□□ 0.19
LINC00052-201ENST00000560153 GRIN2BQ13224 1484 aa16.26■□□□□ 0.19
LINC00052-201ENST00000560153 FHOD3Q2V2M9 1422 aa16.24■□□□□ 0.19
LINC00052-201ENST00000560153 PPP6R1Q9UPN7 881 aa16.24■□□□□ 0.19
LINC00052-201ENST00000560153 EIF4G3O43432 1585 aaKnown RBP16.22■□□□□ 0.19
LINC00052-201ENST00000560153 SUPT6HQ7KZ85 1726 aaKnown RBP16.22■□□□□ 0.19
LINC00052-201ENST00000560153 ERICH6BQ5W0A0 696 aa16.21■□□□□ 0.19
LINC00052-201ENST00000560153 RBM19Q9Y4C8 960 aaKnown RBP16.2■□□□□ 0.18
LINC00052-201ENST00000560153 SNAPC4Q5SXM2 1469 aa16.2■□□□□ 0.18
LINC00052-201ENST00000560153 SAMD9Q5K651 1589 aa16.2■□□□□ 0.18
LINC00052-201ENST00000560153 EHBP1L1Q8N3D4 1523 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms