RNA–Protein interactions for RNA: ENST00000560153.2

LINC00052-201, long intergenic non-protein coding RNA 52, humanhuman

TSL 2 BASIC

Gene LINC00052, Length 1,966 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00052-201ENST00000560153 NISCHQ9Y2I1 1504 aa23.21■■□□□ 1.31
LINC00052-201ENST00000560153 SLC24A1O60721 1099 aa21.56■■□□□ 1.04
LINC00052-201ENST00000560153 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
LINC00052-201ENST00000560153 CCDC180Q9P1Z9 1646 aa20.26■□□□□ 0.83
LINC00052-201ENST00000560153 EHMT2Q96KQ7 1210 aa20.03■□□□□ 0.8
LINC00052-201ENST00000560153 ZCCHC6Q5VYS8 1495 aaKnown RBP19.73■□□□□ 0.75
LINC00052-201ENST00000560153 SHROOM4Q9ULL8 1493 aa19.7■□□□□ 0.74
LINC00052-201ENST00000560153 PLPPR3Q6T4P5 718 aa19.64■□□□□ 0.74
LINC00052-201ENST00000560153 SUPT5HO00267 1087 aaKnown RBP19.51■□□□□ 0.71
LINC00052-201ENST00000560153 ABCC9O60706 1549 aa19.49■□□□□ 0.71
LINC00052-201ENST00000560153 DAXXQ9UER7 740 aaPredicted RBP19.47■□□□□ 0.71
LINC00052-201ENST00000560153 RTN4Q9NQC3 1192 aaKnown RBP19.44■□□□□ 0.7
LINC00052-201ENST00000560153 HRCP23327 699 aa19.27■□□□□ 0.68
LINC00052-201ENST00000560153 DCAF8L2P0C7V8 631 aa19.26■□□□□ 0.67
LINC00052-201ENST00000560153 DCAF1Q9Y4B6 1507 aa19.21■□□□□ 0.67
LINC00052-201ENST00000560153 MYO15BQ96JP2 1530 aa19.19■□□□□ 0.66
LINC00052-201ENST00000560153 NCBP3Q53F19 620 aaKnown RBP19.19■□□□□ 0.66
LINC00052-201ENST00000560153 AEBP2Q6ZN18 517 aaPredicted RBP19.08■□□□□ 0.64
LINC00052-201ENST00000560153 NACADO15069 1562 aa19.01■□□□□ 0.63
LINC00052-201ENST00000560153 RB1CC1Q8TDY2 1594 aa18.89■□□□□ 0.61
LINC00052-201ENST00000560153 PCGF6Q9BYE7 350 aa18.88■□□□□ 0.61
LINC00052-201ENST00000560153 AMER1Q5JTC6 1135 aaPredicted RBP18.85■□□□□ 0.61
LINC00052-201ENST00000560153 KCNA4P22459 653 aa18.8■□□□□ 0.6
LINC00052-201ENST00000560153 PRKCSHP14314 528 aaPredicted RBP18.7■□□□□ 0.58
LINC00052-201ENST00000560153 CSRNP3Q8WYN3 585 aa18.68■□□□□ 0.58
LINC00052-201ENST00000560153 TRIM26Q12899 539 aaPredicted RBP18.65■□□□□ 0.58
LINC00052-201ENST00000560153 SCRIBQ14160 1630 aa18.59■□□□□ 0.57
LINC00052-201ENST00000560153 PHF23Q9BUL5 403 aaPredicted RBP18.58■□□□□ 0.56
LINC00052-201ENST00000560153 ZEB1P37275 1124 aaPredicted RBP18.56■□□□□ 0.56
LINC00052-201ENST00000560153 PPARGC1BQ86YN6 1023 aaKnown RBP18.55■□□□□ 0.56
LINC00052-201ENST00000560153 APLP2Q06481 763 aa18.54■□□□□ 0.56
LINC00052-201ENST00000560153 LOC105371045A0A1W2PR82 267 aa18.52■□□□□ 0.56
LINC00052-201ENST00000560153 RSF1Q96T23 1441 aaPredicted RBP18.41■□□□□ 0.54
LINC00052-201ENST00000560153 TTBK1Q5TCY1 1321 aaPredicted RBP18.4■□□□□ 0.54
LINC00052-201ENST00000560153 UNC13AQ9UPW8 1703 aa18.39■□□□□ 0.53
LINC00052-201ENST00000560153 PABPN1Q86U42 306 aaKnown RBP eCLIP18.38■□□□□ 0.53
LINC00052-201ENST00000560153 BICRAQ9NZM4 1560 aa18.34■□□□□ 0.53
LINC00052-201ENST00000560153 ARXQ96QS3 562 aa18.34■□□□□ 0.53
LINC00052-201ENST00000560153 TIMELESSQ9UNS1 1208 aa18.33■□□□□ 0.53
LINC00052-201ENST00000560153 PELP1Q8IZL8 1130 aaKnown RBP18.29■□□□□ 0.52
LINC00052-201ENST00000560153 TRIM41Q8WV44 630 aa18.28■□□□□ 0.52
LINC00052-201ENST00000560153 MYT1Q01538 1121 aa18.24■□□□□ 0.51
LINC00052-201ENST00000560153 ERICH6Q7L0X2 663 aa18.1■□□□□ 0.49
LINC00052-201ENST00000560153 CECR2Q9BXF3 1484 aa18.04■□□□□ 0.48
LINC00052-201ENST00000560153 TAOK2Q9UL54 1235 aa18■□□□□ 0.47
LINC00052-201ENST00000560153 BAZ1AQ9NRL2 1556 aaPredicted RBP17.98■□□□□ 0.47
LINC00052-201ENST00000560153 TULP1O00294 542 aaPredicted RBP17.97■□□□□ 0.47
LINC00052-201ENST00000560153 MROH2BQ7Z745 1585 aa17.97■□□□□ 0.47
LINC00052-201ENST00000560153 FAM9AQ8IZU1 332 aaPredicted RBP17.96■□□□□ 0.47
LINC00052-201ENST00000560153 WIZO95785 1651 aa17.92■□□□□ 0.46
LINC00052-201ENST00000560153 EIF4G1Q04637 1599 aaKnown RBP17.91■□□□□ 0.46
LINC00052-201ENST00000560153 SCAF1Q9H7N4 1312 aaKnown RBP17.84■□□□□ 0.45
LINC00052-201ENST00000560153 SMARCA4P51532 1647 aa17.82■□□□□ 0.44
LINC00052-201ENST00000560153 WRNQ14191 1432 aaPredicted RBP eCLIP17.81■□□□□ 0.44
LINC00052-201ENST00000560153 TOP2AP11388 1531 aaKnown RBP17.76■□□□□ 0.43
LINC00052-201ENST00000560153 HOMEZQ8IX15 550 aa17.74■□□□□ 0.43
LINC00052-201ENST00000560153 CCER1Q8TC90 406 aaPredicted RBP17.73■□□□□ 0.43
LINC00052-201ENST00000560153 EEA1Q15075 1411 aa17.72■□□□□ 0.43
LINC00052-201ENST00000560153 RANGAP1P46060 587 aaPredicted RBP17.71■□□□□ 0.43
LINC00052-201ENST00000560153 ACIN1Q9UKV3 1341 aaKnown RBP17.7■□□□□ 0.42
LINC00052-201ENST00000560153 CENPBP07199 599 aaPredicted RBP17.68■□□□□ 0.42
LINC00052-201ENST00000560153 TPRNQ4KMQ1 711 aa17.68■□□□□ 0.42
LINC00052-201ENST00000560153 ATAD2BQ9ULI0 1458 aa17.67■□□□□ 0.42
LINC00052-201ENST00000560153 KLHL34Q8N239 644 aa17.66■□□□□ 0.42
LINC00052-201ENST00000560153 BCANQ96GW7 911 aa17.66■□□□□ 0.42
LINC00052-201ENST00000560153 PEG3Q9GZU2 1588 aa17.65■□□□□ 0.42
LINC00052-201ENST00000560153 TNIKQ9UKE5 1360 aa17.64■□□□□ 0.41
LINC00052-201ENST00000560153 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.63■□□□□ 0.41
LINC00052-201ENST00000560153 SMARCA2P51531 1590 aa17.62■□□□□ 0.41
LINC00052-201ENST00000560153 CEP162Q5TB80 1403 aa17.61■□□□□ 0.41
LINC00052-201ENST00000560153 CC2D2AQ9P2K1 1620 aa17.6■□□□□ 0.41
LINC00052-201ENST00000560153 NCAPD3P42695 1498 aa17.59■□□□□ 0.41
LINC00052-201ENST00000560153 DIEXFQ68CQ4 756 aaKnown RBP17.59■□□□□ 0.41
LINC00052-201ENST00000560153 SLC4A1APQ9BWU0 796 aaKnown RBP17.57■□□□□ 0.4
LINC00052-201ENST00000560153 CCDC88BA6NC98 1476 aa17.57■□□□□ 0.4
LINC00052-201ENST00000560153 DNAJC5BQ9UF47 199 aa17.57■□□□□ 0.4
LINC00052-201ENST00000560153 ABCC8Q09428 1581 aa17.56■□□□□ 0.4
LINC00052-201ENST00000560153 BAZ1BQ9UIG0 1483 aaKnown RBP17.52■□□□□ 0.39
LINC00052-201ENST00000560153 NEUROD1Q13562 356 aa17.51■□□□□ 0.39
LINC00052-201ENST00000560153 GOLGA3Q08378 1498 aa17.51■□□□□ 0.39
LINC00052-201ENST00000560153 HMGXB3Q12766 1538 aa17.47■□□□□ 0.39
LINC00052-201ENST00000560153 PODXL2Q9NZ53 605 aa17.46■□□□□ 0.39
LINC00052-201ENST00000560153 ZNF316A6NFI3 1004 aaPredicted RBP17.43■□□□□ 0.38
LINC00052-201ENST00000560153 SOGA1O94964 1423 aa17.43■□□□□ 0.38
LINC00052-201ENST00000560153 PLCB2Q00722 1185 aa17.42■□□□□ 0.38
LINC00052-201ENST00000560153 KIF21BO75037 1637 aa17.42■□□□□ 0.38
LINC00052-201ENST00000560153 GTF3C3Q9Y5Q9 886 aa17.41■□□□□ 0.38
LINC00052-201ENST00000560153 CEP164Q9UPV0 1460 aa17.38■□□□□ 0.37
LINC00052-201ENST00000560153 UBTFP17480 764 aaKnown RBP17.35■□□□□ 0.37
LINC00052-201ENST00000560153 EIF5BO60841 1220 aaKnown RBP17.33■□□□□ 0.37
LINC00052-201ENST00000560153 RUSC2Q8N2Y8 1516 aa17.29■□□□□ 0.36
LINC00052-201ENST00000560153 VPS8Q8N3P4 1428 aa17.25■□□□□ 0.35
LINC00052-201ENST00000560153 CLIP1P30622 1438 aa17.24■□□□□ 0.35
LINC00052-201ENST00000560153 SYNJ1O43426 1573 aa17.21■□□□□ 0.35
LINC00052-201ENST00000560153 HAP1P54257 671 aaPredicted RBP17.2■□□□□ 0.34
LINC00052-201ENST00000560153 CLSPNQ9HAW4 1339 aa17.19■□□□□ 0.34
LINC00052-201ENST00000560153 DNAJC5Q9H3Z4 198 aa17.13■□□□□ 0.33
LINC00052-201ENST00000560153 CADPSQ9ULU8 1353 aa17.13■□□□□ 0.33
LINC00052-201ENST00000560153 ZBTB22O15209 634 aa17.11■□□□□ 0.33
LINC00052-201ENST00000560153 CFTRP13569 1480 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms