RNA–Protein interactions for RNA: ENST00000560003.1

SEMA4B-214, Transcript of semaphorin 4B, humanhuman

TSL 3

Gene SEMA4B, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-214ENST00000560003 CUL7Q14999 1698 aa15.08■□□□□ 0
SEMA4B-214ENST00000560003 CEP170Q5SW79 1584 aa15.05■□□□□ -0
SEMA4B-214ENST00000560003 KIAA0586Q9BVV6 1533 aa15.04■□□□□ -0
SEMA4B-214ENST00000560003 CSRNP3Q8WYN3 585 aa15.04■□□□□ -0
SEMA4B-214ENST00000560003 RAPGEF2Q9Y4G8 1499 aa15.03■□□□□ -0
SEMA4B-214ENST00000560003 ARAP1Q96P48 1450 aa15.02■□□□□ -0
SEMA4B-214ENST00000560003 EEA1Q15075 1411 aa15.01□□□□□ -0.01
SEMA4B-214ENST00000560003 PRG4Q92954 1404 aaPredicted RBP15.01□□□□□ -0.01
SEMA4B-214ENST00000560003 RUSC2Q8N2Y8 1516 aa15.01□□□□□ -0.01
SEMA4B-214ENST00000560003 CARMIL2Q6F5E8 1435 aa14.96□□□□□ -0.01
SEMA4B-214ENST00000560003 FAM9AQ8IZU1 332 aaPredicted RBP14.96□□□□□ -0.01
SEMA4B-214ENST00000560003 SHROOM2Q13796 1616 aa14.95□□□□□ -0.02
SEMA4B-214ENST00000560003 NPM1P06748 294 aaKnown RBP eCLIP14.94□□□□□ -0.02
SEMA4B-214ENST00000560003 PRXQ9BXM0 1461 aa14.94□□□□□ -0.02
SEMA4B-214ENST00000560003 TRHP20396 242 aaPredicted RBP14.91□□□□□ -0.02
SEMA4B-214ENST00000560003 PTPRGP23470 1445 aa14.89□□□□□ -0.03
SEMA4B-214ENST00000560003 TNIKQ9UKE5 1360 aa14.87□□□□□ -0.03
SEMA4B-214ENST00000560003 IQGAP2Q13576 1575 aa14.87□□□□□ -0.03
SEMA4B-214ENST00000560003 ERCC6L2Q5T890 1561 aa14.87□□□□□ -0.03
SEMA4B-214ENST00000560003 GOLGA3Q08378 1498 aa14.83□□□□□ -0.03
SEMA4B-214ENST00000560003 TTBK1Q5TCY1 1321 aaPredicted RBP14.83□□□□□ -0.04
SEMA4B-214ENST00000560003 UGGT2Q9NYU1 1516 aa14.82□□□□□ -0.04
SEMA4B-214ENST00000560003 UBTFP17480 764 aaKnown RBP14.79□□□□□ -0.04
SEMA4B-214ENST00000560003 DISP1Q96F81 1524 aa14.76□□□□□ -0.05
SEMA4B-214ENST00000560003 UACAQ9BZF9 1416 aa14.75□□□□□ -0.05
SEMA4B-214ENST00000560003 FOXD1Q16676 465 aa14.74□□□□□ -0.05
SEMA4B-214ENST00000560003 UHRF1BP1LA0JNW5 1464 aa14.71□□□□□ -0.05
SEMA4B-214ENST00000560003 P3H3Q8IVL6 736 aa14.71□□□□□ -0.05
SEMA4B-214ENST00000560003 KIF21BO75037 1637 aa14.7□□□□□ -0.06
SEMA4B-214ENST00000560003 RANGAP1P46060 587 aaPredicted RBP14.7□□□□□ -0.06
SEMA4B-214ENST00000560003 CTTNBP2Q8WZ74 1663 aa14.7□□□□□ -0.06
SEMA4B-214ENST00000560003 FAM69CQ0P6D2 419 aa14.69□□□□□ -0.06
SEMA4B-214ENST00000560003 KIAA0556O60303 1618 aa14.69□□□□□ -0.06
SEMA4B-214ENST00000560003 ABCC2Q92887 1545 aa14.68□□□□□ -0.06
SEMA4B-214ENST00000560003 EHMT2Q96KQ7 1210 aa14.68□□□□□ -0.06
SEMA4B-214ENST00000560003 ADCY10Q96PN6 1610 aa14.66□□□□□ -0.06
SEMA4B-214ENST00000560003 MAPKBP1O60336 1514 aa14.66□□□□□ -0.06
SEMA4B-214ENST00000560003 PLB1Q6P1J6 1458 aa14.64□□□□□ -0.07
SEMA4B-214ENST00000560003 ABCC10Q5T3U5 1492 aa14.63□□□□□ -0.07
SEMA4B-214ENST00000560003 KDM5BQ9UGL1 1544 aa14.61□□□□□ -0.07
SEMA4B-214ENST00000560003 ASXL2Q76L83 1435 aa14.6□□□□□ -0.07
SEMA4B-214ENST00000560003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.59□□□□□ -0.07
SEMA4B-214ENST00000560003 HNRNPUL2Q1KMD3 747 aaKnown RBP14.59□□□□□ -0.07
SEMA4B-214ENST00000560003 EFCAB5A4FU69 1503 aa14.59□□□□□ -0.07
SEMA4B-214ENST00000560003 SAMD9Q5K651 1589 aa14.57□□□□□ -0.08
SEMA4B-214ENST00000560003 ABCA8O94911 1581 aa14.56□□□□□ -0.08
SEMA4B-214ENST00000560003 FHOD3Q2V2M9 1422 aa14.55□□□□□ -0.08
SEMA4B-214ENST00000560003 PLEKHD1A6NEE1 506 aa14.54□□□□□ -0.08
SEMA4B-214ENST00000560003 KCNH8Q96L42 1107 aa14.54□□□□□ -0.08
SEMA4B-214ENST00000560003 FMN1Q68DA7 1419 aa14.54□□□□□ -0.08
SEMA4B-214ENST00000560003 ATP1B4Q9UN42 357 aaPredicted RBP14.53□□□□□ -0.08
SEMA4B-214ENST00000560003 ARID3CA6NKF2 412 aa14.52□□□□□ -0.09
SEMA4B-214ENST00000560003 CDK11AQ9UQ88 783 aaPredicted RBP14.52□□□□□ -0.09
SEMA4B-214ENST00000560003 ATP10BO94823 1461 aa14.51□□□□□ -0.09
SEMA4B-214ENST00000560003 WDR7Q9Y4E6 1490 aa14.51□□□□□ -0.09
SEMA4B-214ENST00000560003 DIP2BQ9P265 1576 aa14.49□□□□□ -0.09
SEMA4B-214ENST00000560003 EPRSP07814 1512 aaKnown RBP14.49□□□□□ -0.09
SEMA4B-214ENST00000560003 ZCCHC11Q5TAX3 1644 aaKnown RBP14.48□□□□□ -0.09
SEMA4B-214ENST00000560003 GLI2P10070 1586 aa14.48□□□□□ -0.09
SEMA4B-214ENST00000560003 ARHGAP35Q9NRY4 1499 aa14.48□□□□□ -0.09
SEMA4B-214ENST00000560003 RAPGEF6Q8TEU7 1601 aa14.46□□□□□ -0.09
SEMA4B-214ENST00000560003 ADRA2BP18089 450 aa14.45□□□□□ -0.1
SEMA4B-214ENST00000560003 CLIP1P30622 1438 aa14.45□□□□□ -0.1
SEMA4B-214ENST00000560003 NUP153P49790 1475 aaKnown RBP14.44□□□□□ -0.1
SEMA4B-214ENST00000560003 CD109Q6YHK3 1445 aa14.44□□□□□ -0.1
SEMA4B-214ENST00000560003 TEX14Q8IWB6 1497 aa14.44□□□□□ -0.1
SEMA4B-214ENST00000560003 KIF13AQ9H1H9 1805 aa14.43□□□□□ -0.1
SEMA4B-214ENST00000560003 LOC105371045A0A1W2PR82 267 aa14.41□□□□□ -0.1
SEMA4B-214ENST00000560003 PHLDB1Q86UU1 1377 aa14.4□□□□□ -0.1
SEMA4B-214ENST00000560003 CASKIN1Q8WXD9 1431 aa14.38□□□□□ -0.11
SEMA4B-214ENST00000560003 MAGI3Q5TCQ9 1506 aa14.37□□□□□ -0.11
SEMA4B-214ENST00000560003 HECW1Q76N89 1606 aa14.34□□□□□ -0.11
SEMA4B-214ENST00000560003 CEP162Q5TB80 1403 aa14.34□□□□□ -0.11
SEMA4B-214ENST00000560003 MAP3K4Q9Y6R4 1608 aa14.33□□□□□ -0.11
SEMA4B-214ENST00000560003 CCDC18Q5T9S5 1454 aa14.33□□□□□ -0.12
SEMA4B-214ENST00000560003 KDM6BO15054 1643 aa14.31□□□□□ -0.12
SEMA4B-214ENST00000560003 CFAP43Q8NDM7 1665 aa14.31□□□□□ -0.12
SEMA4B-214ENST00000560003 PPP6R1Q9UPN7 881 aa14.31□□□□□ -0.12
SEMA4B-214ENST00000560003 TSPOAP1O95153 1857 aa14.31□□□□□ -0.12
SEMA4B-214ENST00000560003 FYCO1Q9BQS8 1478 aa14.31□□□□□ -0.12
SEMA4B-214ENST00000560003 EFCAB2Q5VUJ9 269 aa14.29□□□□□ -0.12
SEMA4B-214ENST00000560003 TROQ12816 1431 aaPredicted RBP14.29□□□□□ -0.12
SEMA4B-214ENST00000560003 CDK13Q14004 1512 aaKnown RBP14.29□□□□□ -0.12
SEMA4B-214ENST00000560003 KCNA4P22459 653 aa14.28□□□□□ -0.12
SEMA4B-214ENST00000560003 ABCA9Q8IUA7 1624 aa14.28□□□□□ -0.12
SEMA4B-214ENST00000560003 NEO1Q92859 1461 aa14.28□□□□□ -0.12
SEMA4B-214ENST00000560003 ARAP3Q8WWN8 1544 aa14.25□□□□□ -0.13
SEMA4B-214ENST00000560003 PLCH2O75038 1416 aa14.25□□□□□ -0.13
SEMA4B-214ENST00000560003 PPRC1Q5VV67 1664 aaKnown RBP14.23□□□□□ -0.13
SEMA4B-214ENST00000560003 APLP2Q06481 763 aa14.23□□□□□ -0.13
SEMA4B-214ENST00000560003 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.23□□□□□ -0.13
SEMA4B-214ENST00000560003 FANCAO15360 1455 aa14.23□□□□□ -0.13
SEMA4B-214ENST00000560003 COL17A1Q9UMD9 1497 aaPredicted RBP14.23□□□□□ -0.13
SEMA4B-214ENST00000560003 MTUS2Q5JR59 1369 aa14.22□□□□□ -0.13
SEMA4B-214ENST00000560003 AKNAQ7Z591 1439 aa14.22□□□□□ -0.13
SEMA4B-214ENST00000560003 PCF11O94913 1555 aaKnown RBP14.22□□□□□ -0.13
SEMA4B-214ENST00000560003 RAPGEF3O95398 923 aa14.21□□□□□ -0.13
SEMA4B-214ENST00000560003 KIF14Q15058 1648 aa14.19□□□□□ -0.14
SEMA4B-214ENST00000560003 VPS8Q8N3P4 1428 aa14.19□□□□□ -0.14
SEMA4B-214ENST00000560003 DENND4BO75064 1496 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms