RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 RIMBP3BA6NNM3 1639 aa33.81■■■■□ 3
TSPAN3-207ENST00000559494 RIMBP3Q9UFD9 1639 aa33.81■■■■□ 3
TSPAN3-207ENST00000559494 KIAA0586Q9BVV6 1533 aa33.75■■■□□ 2.99
TSPAN3-207ENST00000559494 JPH4Q96JJ6 628 aa33.75■■■□□ 2.99
TSPAN3-207ENST00000559494 SHROOM2Q13796 1616 aa33.68■■■□□ 2.98
TSPAN3-207ENST00000559494 ERCC6L2Q5T890 1561 aa33.62■■■□□ 2.97
TSPAN3-207ENST00000559494 CYB5RLQ6IPT4 315 aa33.61■■■□□ 2.97
TSPAN3-207ENST00000559494 ARAP1Q96P48 1450 aa33.6■■■□□ 2.97
TSPAN3-207ENST00000559494 PRG4Q92954 1404 aaPredicted RBP33.6■■■□□ 2.97
TSPAN3-207ENST00000559494 IQGAP2Q13576 1575 aa33.53■■■□□ 2.96
TSPAN3-207ENST00000559494 KIF21BO75037 1637 aa33.48■■■□□ 2.95
TSPAN3-207ENST00000559494 CTTNBP2Q8WZ74 1663 aa33.45■■■□□ 2.95
TSPAN3-207ENST00000559494 EHMT2Q96KQ7 1210 aa33.43■■■□□ 2.94
TSPAN3-207ENST00000559494 UGGT2Q9NYU1 1516 aa33.4■■■□□ 2.94
TSPAN3-207ENST00000559494 CARMIL2Q6F5E8 1435 aa33.36■■■□□ 2.93
TSPAN3-207ENST00000559494 DISP1Q96F81 1524 aa33.35■■■□□ 2.93
TSPAN3-207ENST00000559494 GOLGA3Q08378 1498 aa33.33■■■□□ 2.93
TSPAN3-207ENST00000559494 UBTFP17480 764 aaKnown RBP33.31■■■□□ 2.92
TSPAN3-207ENST00000559494 TNIKQ9UKE5 1360 aa33.26■■■□□ 2.92
TSPAN3-207ENST00000559494 PTPRGP23470 1445 aa33.24■■■□□ 2.91
TSPAN3-207ENST00000559494 TTBK1Q5TCY1 1321 aaPredicted RBP33.23■■■□□ 2.91
TSPAN3-207ENST00000559494 KIAA0556O60303 1618 aa33.22■■■□□ 2.91
TSPAN3-207ENST00000559494 RANGAP1P46060 587 aaPredicted RBP33.2■■■□□ 2.91
TSPAN3-207ENST00000559494 P3H3Q8IVL6 736 aa33.16■■■□□ 2.9
TSPAN3-207ENST00000559494 SAMD9Q5K651 1589 aa33.08■■■□□ 2.89
TSPAN3-207ENST00000559494 ADCY10Q96PN6 1610 aa33.02■■■□□ 2.88
TSPAN3-207ENST00000559494 UACAQ9BZF9 1416 aa33.01■■■□□ 2.87
TSPAN3-207ENST00000559494 LOC105371045A0A1W2PR82 267 aa32.99■■■□□ 2.87
TSPAN3-207ENST00000559494 NPM1P06748 294 aaKnown RBP eCLIP32.96■■■□□ 2.87
TSPAN3-207ENST00000559494 EFCAB5A4FU69 1503 aa32.95■■■□□ 2.87
TSPAN3-207ENST00000559494 FHOD3Q2V2M9 1422 aa32.95■■■□□ 2.87
TSPAN3-207ENST00000559494 UHRF1BP1LA0JNW5 1464 aa32.95■■■□□ 2.86
TSPAN3-207ENST00000559494 PLB1Q6P1J6 1458 aa32.94■■■□□ 2.86
TSPAN3-207ENST00000559494 ABCC2Q92887 1545 aa32.9■■■□□ 2.86
TSPAN3-207ENST00000559494 ARHGAP35Q9NRY4 1499 aa32.9■■■□□ 2.86
TSPAN3-207ENST00000559494 ABCA8O94911 1581 aa32.87■■■□□ 2.85
TSPAN3-207ENST00000559494 TRHP20396 242 aaPredicted RBP32.82■■■□□ 2.84
TSPAN3-207ENST00000559494 KDM5BQ9UGL1 1544 aa32.79■■■□□ 2.84
TSPAN3-207ENST00000559494 CLIP1P30622 1438 aa32.77■■■□□ 2.84
TSPAN3-207ENST00000559494 MAPKBP1O60336 1514 aa32.74■■■□□ 2.83
TSPAN3-207ENST00000559494 RAPGEF6Q8TEU7 1601 aa32.72■■■□□ 2.83
TSPAN3-207ENST00000559494 ARID3CA6NKF2 412 aa32.71■■■□□ 2.83
TSPAN3-207ENST00000559494 ZCCHC11Q5TAX3 1644 aaKnown RBP32.7■■■□□ 2.83
TSPAN3-207ENST00000559494 FMN1Q68DA7 1419 aa32.68■■■□□ 2.82
TSPAN3-207ENST00000559494 CEP162Q5TB80 1403 aa32.67■■■□□ 2.82
TSPAN3-207ENST00000559494 ASXL2Q76L83 1435 aa32.67■■■□□ 2.82
TSPAN3-207ENST00000559494 ATP10BO94823 1461 aa32.66■■■□□ 2.82
TSPAN3-207ENST00000559494 NUP153P49790 1475 aaKnown RBP32.64■■■□□ 2.82
TSPAN3-207ENST00000559494 ABCC10Q5T3U5 1492 aa32.61■■■□□ 2.81
TSPAN3-207ENST00000559494 FAM69CQ0P6D2 419 aa32.6■■■□□ 2.81
TSPAN3-207ENST00000559494 ATP1B4Q9UN42 357 aaPredicted RBP32.57■■■□□ 2.8
TSPAN3-207ENST00000559494 KIF13AQ9H1H9 1805 aa32.55■■■□□ 2.8
TSPAN3-207ENST00000559494 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.54■■■□□ 2.8
TSPAN3-207ENST00000559494 HNRNPUL2Q1KMD3 747 aaKnown RBP32.54■■■□□ 2.8
TSPAN3-207ENST00000559494 DIP2BQ9P265 1576 aa32.53■■■□□ 2.8
TSPAN3-207ENST00000559494 WDR7Q9Y4E6 1490 aa32.5■■■□□ 2.79
TSPAN3-207ENST00000559494 KCNH8Q96L42 1107 aa32.48■■■□□ 2.79
TSPAN3-207ENST00000559494 CASKIN1Q8WXD9 1431 aa32.48■■■□□ 2.79
TSPAN3-207ENST00000559494 EPRSP07814 1512 aaKnown RBP32.47■■■□□ 2.79
TSPAN3-207ENST00000559494 HECW1Q76N89 1606 aa32.45■■■□□ 2.79
TSPAN3-207ENST00000559494 CDK13Q14004 1512 aaKnown RBP32.43■■■□□ 2.78
TSPAN3-207ENST00000559494 PCF11O94913 1555 aaKnown RBP32.43■■■□□ 2.78
TSPAN3-207ENST00000559494 GLI2P10070 1586 aa32.41■■■□□ 2.78
TSPAN3-207ENST00000559494 PLEKHD1A6NEE1 506 aa32.41■■■□□ 2.78
TSPAN3-207ENST00000559494 FYCO1Q9BQS8 1478 aa32.36■■■□□ 2.77
TSPAN3-207ENST00000559494 LRRIQ1Q96JM4 1722 aa32.35■■■□□ 2.77
TSPAN3-207ENST00000559494 CDK11AQ9UQ88 783 aaPredicted RBP32.29■■■□□ 2.76
TSPAN3-207ENST00000559494 TSPOAP1O95153 1857 aa32.29■■■□□ 2.76
TSPAN3-207ENST00000559494 CCDC18Q5T9S5 1454 aa32.27■■■□□ 2.76
TSPAN3-207ENST00000559494 MAP3K4Q9Y6R4 1608 aa32.25■■■□□ 2.75
TSPAN3-207ENST00000559494 VPS8Q8N3P4 1428 aa32.25■■■□□ 2.75
TSPAN3-207ENST00000559494 CD109Q6YHK3 1445 aa32.23■■■□□ 2.75
TSPAN3-207ENST00000559494 PPRC1Q5VV67 1664 aaKnown RBP32.19■■■□□ 2.74
TSPAN3-207ENST00000559494 CFAP43Q8NDM7 1665 aa32.18■■■□□ 2.74
TSPAN3-207ENST00000559494 TROQ12816 1431 aaPredicted RBP32.18■■■□□ 2.74
TSPAN3-207ENST00000559494 ABCA9Q8IUA7 1624 aa32.18■■■□□ 2.74
TSPAN3-207ENST00000559494 MAGI3Q5TCQ9 1506 aa32.14■■■□□ 2.74
TSPAN3-207ENST00000559494 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.12■■■□□ 2.732e-7■■■■■ 47.7
TSPAN3-207ENST00000559494 TEX14Q8IWB6 1497 aa32.07■■■□□ 2.73
TSPAN3-207ENST00000559494 KIF14Q15058 1648 aa32.07■■■□□ 2.72
TSPAN3-207ENST00000559494 TTC37Q6PGP7 1564 aa32.05■■■□□ 2.72
TSPAN3-207ENST00000559494 MTUS2Q5JR59 1369 aa32.02■■■□□ 2.72
TSPAN3-207ENST00000559494 TIAM1Q13009 1591 aa31.98■■■□□ 2.71
TSPAN3-207ENST00000559494 PLCH2O75038 1416 aa31.97■■■□□ 2.71
TSPAN3-207ENST00000559494 COL17A1Q9UMD9 1497 aaPredicted RBP31.97■■■□□ 2.71
TSPAN3-207ENST00000559494 MAP3K1Q13233 1512 aa31.94■■■□□ 2.7
TSPAN3-207ENST00000559494 KDM6BO15054 1643 aa31.94■■■□□ 2.7
TSPAN3-207ENST00000559494 KANK4Q5T7N3 995 aaPredicted RBP31.92■■■□□ 2.7
TSPAN3-207ENST00000559494 APLP2Q06481 763 aa31.9■■■□□ 2.7
TSPAN3-207ENST00000559494 PHLDB1Q86UU1 1377 aa31.9■■■□□ 2.7
TSPAN3-207ENST00000559494 EHBP1L1Q8N3D4 1523 aa31.9■■■□□ 2.7
TSPAN3-207ENST00000559494 NEO1Q92859 1461 aa31.9■■■□□ 2.7
TSPAN3-207ENST00000559494 FANCAO15360 1455 aa31.88■■■□□ 2.69
TSPAN3-207ENST00000559494 MYO5CQ9NQX4 1742 aa31.88■■■□□ 2.69
TSPAN3-207ENST00000559494 LRRC9Q6ZRR7 1453 aa31.87■■■□□ 2.69
TSPAN3-207ENST00000559494 EFCAB2Q5VUJ9 269 aa31.87■■■□□ 2.69
TSPAN3-207ENST00000559494 AKNAQ7Z591 1439 aa31.86■■■□□ 2.69
TSPAN3-207ENST00000559494 ARAP3Q8WWN8 1544 aa31.84■■■□□ 2.69
TSPAN3-207ENST00000559494 GPATCH8Q9UKJ3 1502 aaKnown RBP31.81■■■□□ 2.68
TSPAN3-207ENST00000559494 CDC42BPBQ9Y5S2 1711 aa31.81■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms