RNA–Protein interactions for RNA: ENST00000559255.1

TNFAIP2-204, Transcript of TNF alpha induced protein 2, humanhuman

TSL 2

Gene TNFAIP2, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-204ENST00000559255 IGF1RP08069 1367 aa24.14■■□□□ 1.45
TNFAIP2-204ENST00000559255 NUP160Q12769 1436 aa24.1■■□□□ 1.45
TNFAIP2-204ENST00000559255 ERICH3Q5RHP9 1530 aa24.1■■□□□ 1.45
TNFAIP2-204ENST00000559255 RAPGEF2Q9Y4G8 1499 aa24.09■■□□□ 1.45
TNFAIP2-204ENST00000559255 CEP170Q5SW79 1584 aa24.08■■□□□ 1.45
TNFAIP2-204ENST00000559255 FHAD1B1AJZ9 1412 aa24.07■■□□□ 1.44
TNFAIP2-204ENST00000559255 TNIKQ9UKE5 1360 aa24.06■■□□□ 1.44
TNFAIP2-204ENST00000559255 UBTFP17480 764 aaKnown RBP24.05■■□□□ 1.44
TNFAIP2-204ENST00000559255 ERCC6L2Q5T890 1561 aa24.03■■□□□ 1.44
TNFAIP2-204ENST00000559255 SHROOM2Q13796 1616 aa24.03■■□□□ 1.44
TNFAIP2-204ENST00000559255 CARMIL1Q5VZK9 1371 aa24.03■■□□□ 1.44
TNFAIP2-204ENST00000559255 TRHP20396 242 aaPredicted RBP24.01■■□□□ 1.43
TNFAIP2-204ENST00000559255 CUL7Q14999 1698 aa24.01■■□□□ 1.43
TNFAIP2-204ENST00000559255 CEP162Q5TB80 1403 aa23.91■■□□□ 1.42
TNFAIP2-204ENST00000559255 PRG4Q92954 1404 aaPredicted RBP23.8■■□□□ 1.4
TNFAIP2-204ENST00000559255 JPH4Q96JJ6 628 aa23.79■■□□□ 1.4
TNFAIP2-204ENST00000559255 CLIP1P30622 1438 aa23.78■■□□□ 1.4
TNFAIP2-204ENST00000559255 CTTNBP2Q8WZ74 1663 aa23.7■■□□□ 1.38
TNFAIP2-204ENST00000559255 KIAA0586Q9BVV6 1533 aa23.69■■□□□ 1.38
TNFAIP2-204ENST00000559255 RANGAP1P46060 587 aaPredicted RBP23.68■■□□□ 1.38
TNFAIP2-204ENST00000559255 KIF13AQ9H1H9 1805 aa23.67■■□□□ 1.38
TNFAIP2-204ENST00000559255 ADCY10Q96PN6 1610 aa23.59■■□□□ 1.37
TNFAIP2-204ENST00000559255 ARHGAP35Q9NRY4 1499 aa23.58■■□□□ 1.37
TNFAIP2-204ENST00000559255 MAPKBP1O60336 1514 aa23.56■■□□□ 1.36
TNFAIP2-204ENST00000559255 VPS8Q8N3P4 1428 aa23.54■■□□□ 1.36
TNFAIP2-204ENST00000559255 EFCAB5A4FU69 1503 aa23.53■■□□□ 1.36
TNFAIP2-204ENST00000559255 IQGAP2Q13576 1575 aa23.52■■□□□ 1.36
TNFAIP2-204ENST00000559255 ABCC10Q5T3U5 1492 aa23.5■■□□□ 1.35
TNFAIP2-204ENST00000559255 DIP2BQ9P265 1576 aa23.46■■□□□ 1.35
TNFAIP2-204ENST00000559255 SAMD9Q5K651 1589 aa23.45■■□□□ 1.34
TNFAIP2-204ENST00000559255 NPM1P06748 294 aaKnown RBP eCLIP23.43■■□□□ 1.34
TNFAIP2-204ENST00000559255 PTPRGP23470 1445 aa23.42■■□□□ 1.34
TNFAIP2-204ENST00000559255 UGGT2Q9NYU1 1516 aa23.41■■□□□ 1.34
TNFAIP2-204ENST00000559255 FHOD3Q2V2M9 1422 aa23.4■■□□□ 1.34
TNFAIP2-204ENST00000559255 CARMIL2Q6F5E8 1435 aa23.4■■□□□ 1.34
TNFAIP2-204ENST00000559255 FAM69CQ0P6D2 419 aa23.4■■□□□ 1.34
TNFAIP2-204ENST00000559255 P3H3Q8IVL6 736 aa23.4■■□□□ 1.34
TNFAIP2-204ENST00000559255 DISP1Q96F81 1524 aa23.38■■□□□ 1.33
TNFAIP2-204ENST00000559255 ABCC2Q92887 1545 aa23.34■■□□□ 1.33
TNFAIP2-204ENST00000559255 UHRF1BP1LA0JNW5 1464 aa23.33■■□□□ 1.32
TNFAIP2-204ENST00000559255 APLP2Q06481 763 aa23.31■■□□□ 1.32
TNFAIP2-204ENST00000559255 FMN1Q68DA7 1419 aa23.3■■□□□ 1.32
TNFAIP2-204ENST00000559255 KIAA0556O60303 1618 aa23.29■■□□□ 1.32
TNFAIP2-204ENST00000559255 TSPOAP1O95153 1857 aa23.27■■□□□ 1.32
TNFAIP2-204ENST00000559255 PPARGC1BQ86YN6 1023 aaKnown RBP23.27■■□□□ 1.32
TNFAIP2-204ENST00000559255 PCF11O94913 1555 aaKnown RBP23.26■■□□□ 1.31
TNFAIP2-204ENST00000559255 UACAQ9BZF9 1416 aa23.26■■□□□ 1.31
TNFAIP2-204ENST00000559255 AEBP2Q6ZN18 517 aaPredicted RBP23.24■■□□□ 1.31
TNFAIP2-204ENST00000559255 FYCO1Q9BQS8 1478 aa23.23■■□□□ 1.31
TNFAIP2-204ENST00000559255 ASXL2Q76L83 1435 aa23.23■■□□□ 1.31
TNFAIP2-204ENST00000559255 CASKIN1Q8WXD9 1431 aa23.23■■□□□ 1.31
TNFAIP2-204ENST00000559255 GLI2P10070 1586 aa23.23■■□□□ 1.31
TNFAIP2-204ENST00000559255 KDM5BQ9UGL1 1544 aa23.23■■□□□ 1.31
TNFAIP2-204ENST00000559255 PLB1Q6P1J6 1458 aa23.23■■□□□ 1.31
TNFAIP2-204ENST00000559255 TTBK1Q5TCY1 1321 aaPredicted RBP23.22■■□□□ 1.31
TNFAIP2-204ENST00000559255 PPRC1Q5VV67 1664 aaKnown RBP23.2■■□□□ 1.3
TNFAIP2-204ENST00000559255 KDM6BO15054 1643 aa23.19■■□□□ 1.3
TNFAIP2-204ENST00000559255 TRIM26Q12899 539 aaPredicted RBP23.19■■□□□ 1.3
TNFAIP2-204ENST00000559255 MAP3K1Q13233 1512 aa23.17■■□□□ 1.3
TNFAIP2-204ENST00000559255 ZCCHC11Q5TAX3 1644 aaKnown RBP23.16■■□□□ 1.3
TNFAIP2-204ENST00000559255 TIAM1Q13009 1591 aa23.14■■□□□ 1.3
TNFAIP2-204ENST00000559255 ATP1B4Q9UN42 357 aaPredicted RBP23.14■■□□□ 1.29
TNFAIP2-204ENST00000559255 EPRSP07814 1512 aaKnown RBP23.12■■□□□ 1.29
TNFAIP2-204ENST00000559255 CFAP43Q8NDM7 1665 aa23.12■■□□□ 1.29
TNFAIP2-204ENST00000559255 MAP3K4Q9Y6R4 1608 aa23.1■■□□□ 1.29
TNFAIP2-204ENST00000559255 PCGF6Q9BYE7 350 aa23.1■■□□□ 1.29
TNFAIP2-204ENST00000559255 HECW1Q76N89 1606 aa23.09■■□□□ 1.29
TNFAIP2-204ENST00000559255 ABCA8O94911 1581 aa23.08■■□□□ 1.28
TNFAIP2-204ENST00000559255 KANK4Q5T7N3 995 aaPredicted RBP23.07■■□□□ 1.28
TNFAIP2-204ENST00000559255 RAPGEF6Q8TEU7 1601 aa23.04■■□□□ 1.28
TNFAIP2-204ENST00000559255 LRRIQ1Q96JM4 1722 aa23.03■■□□□ 1.28
TNFAIP2-204ENST00000559255 CCDC18Q5T9S5 1454 aa23.03■■□□□ 1.28
TNFAIP2-204ENST00000559255 LRRC9Q6ZRR7 1453 aa23.03■■□□□ 1.28
TNFAIP2-204ENST00000559255 WDR7Q9Y4E6 1490 aa23.02■■□□□ 1.28
TNFAIP2-204ENST00000559255 COL17A1Q9UMD9 1497 aaPredicted RBP23■■□□□ 1.27
TNFAIP2-204ENST00000559255 KDM4FA0A1W2PPD8 638 aa22.98■■□□□ 1.27
TNFAIP2-204ENST00000559255 NUP153P49790 1475 aaKnown RBP22.96■■□□□ 1.27
TNFAIP2-204ENST00000559255 TEX14Q8IWB6 1497 aa22.96■■□□□ 1.27
TNFAIP2-204ENST00000559255 CDK13Q14004 1512 aaKnown RBP22.93■■□□□ 1.26
TNFAIP2-204ENST00000559255 MTUS2Q5JR59 1369 aa22.92■■□□□ 1.26
TNFAIP2-204ENST00000559255 EHBP1L1Q8N3D4 1523 aa22.9■■□□□ 1.26
TNFAIP2-204ENST00000559255 MAGI3Q5TCQ9 1506 aa22.89■■□□□ 1.25
TNFAIP2-204ENST00000559255 ARID3CA6NKF2 412 aa22.88■■□□□ 1.25
TNFAIP2-204ENST00000559255 CD109Q6YHK3 1445 aa22.86■■□□□ 1.25
TNFAIP2-204ENST00000559255 ATP10BO94823 1461 aa22.85■■□□□ 1.25
TNFAIP2-204ENST00000559255 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.82■■□□□ 1.24
TNFAIP2-204ENST00000559255 HNRNPUL2Q1KMD3 747 aaKnown RBP22.82■■□□□ 1.24
TNFAIP2-204ENST00000559255 SUPT6HQ7KZ85 1726 aaKnown RBP22.82■■□□□ 1.24
TNFAIP2-204ENST00000559255 CDK11AQ9UQ88 783 aaPredicted RBP22.82■■□□□ 1.24
TNFAIP2-204ENST00000559255 RRBP1Q9P2E9 1410 aaKnown RBP22.8■■□□□ 1.24
TNFAIP2-204ENST00000559255 PHLDB1Q86UU1 1377 aa22.8■■□□□ 1.24
TNFAIP2-204ENST00000559255 KCNH8Q96L42 1107 aa22.8■■□□□ 1.24
TNFAIP2-204ENST00000559255 ADGRL1O94910 1474 aa22.78■■□□□ 1.24
TNFAIP2-204ENST00000559255 NCOA2Q15596 1464 aa22.78■■□□□ 1.24
TNFAIP2-204ENST00000559255 ABCA9Q8IUA7 1624 aa22.76■■□□□ 1.23
TNFAIP2-204ENST00000559255 CCNB3Q8WWL7 1395 aa22.75■■□□□ 1.23
TNFAIP2-204ENST00000559255 TROQ12816 1431 aaPredicted RBP22.74■■□□□ 1.23
TNFAIP2-204ENST00000559255 ARAP3Q8WWN8 1544 aa22.73■■□□□ 1.23
TNFAIP2-204ENST00000559255 MYOM3Q5VTT5 1437 aa22.69■■□□□ 1.22
TNFAIP2-204ENST00000559255 PLEKHD1A6NEE1 506 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms