RNA–Protein interactions for RNA: ENST00000559255.1

TNFAIP2-204, Transcript of TNF alpha induced protein 2, humanhuman

TSL 2

Gene TNFAIP2, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-204ENST00000559255 NISCHQ9Y2I1 1504 aa34.27■■■■□ 3.08
TNFAIP2-204ENST00000559255 CCDC180Q9P1Z9 1646 aa30.6■■■□□ 2.49
TNFAIP2-204ENST00000559255 ABCC9O60706 1549 aa30.42■■■□□ 2.46
TNFAIP2-204ENST00000559255 RB1CC1Q8TDY2 1594 aa29.04■■■□□ 2.24
TNFAIP2-204ENST00000559255 NACADO15069 1562 aa28.89■■■□□ 2.21
TNFAIP2-204ENST00000559255 ZCCHC6Q5VYS8 1495 aaKnown RBP28.76■■■□□ 2.2
TNFAIP2-204ENST00000559255 MYO15BQ96JP2 1530 aa28.58■■■□□ 2.17
TNFAIP2-204ENST00000559255 DNAJC5BQ9UF47 199 aa28.55■■■□□ 2.16
TNFAIP2-204ENST00000559255 DCAF8L2P0C7V8 631 aa28.53■■■□□ 2.16
TNFAIP2-204ENST00000559255 UNC13AQ9UPW8 1703 aa28.48■■■□□ 2.15
TNFAIP2-204ENST00000559255 DCAF1Q9Y4B6 1507 aa28.37■■■□□ 2.13
TNFAIP2-204ENST00000559255 PABPN1Q86U42 306 aaKnown RBP eCLIP28.3■■■□□ 2.12
TNFAIP2-204ENST00000559255 BICRAQ9NZM4 1560 aa28.26■■■□□ 2.11
TNFAIP2-204ENST00000559255 SHROOM4Q9ULL8 1493 aa27.88■■■□□ 2.05
TNFAIP2-204ENST00000559255 SCRIBQ14160 1630 aa27.79■■■□□ 2.04
TNFAIP2-204ENST00000559255 CC2D2AQ9P2K1 1620 aa27.55■■■□□ 2
TNFAIP2-204ENST00000559255 EIF4G1Q04637 1599 aaKnown RBP27.52■■■□□ 2
TNFAIP2-204ENST00000559255 CECR2Q9BXF3 1484 aa27.43■■□□□ 1.98
TNFAIP2-204ENST00000559255 NCAPD3P42695 1498 aa26.68■■□□□ 1.86
TNFAIP2-204ENST00000559255 SUPT5HO00267 1087 aaKnown RBP26.65■■□□□ 1.86
TNFAIP2-204ENST00000559255 ATAD2BQ9ULI0 1458 aa26.58■■□□□ 1.85
TNFAIP2-204ENST00000559255 SMARCA4P51532 1647 aa26.58■■□□□ 1.85
TNFAIP2-204ENST00000559255 RSF1Q96T23 1441 aaPredicted RBP26.51■■□□□ 1.83
TNFAIP2-204ENST00000559255 SMARCA2P51531 1590 aa26.5■■□□□ 1.83
TNFAIP2-204ENST00000559255 BAZ1AQ9NRL2 1556 aaPredicted RBP26.5■■□□□ 1.83
TNFAIP2-204ENST00000559255 HMGXB3Q12766 1538 aa26.49■■□□□ 1.83
TNFAIP2-204ENST00000559255 MROH2BQ7Z745 1585 aa26.45■■□□□ 1.83
TNFAIP2-204ENST00000559255 PEG3Q9GZU2 1588 aa26.39■■□□□ 1.81
TNFAIP2-204ENST00000559255 BAZ1BQ9UIG0 1483 aaKnown RBP26.28■■□□□ 1.8
TNFAIP2-204ENST00000559255 CUX2O14529 1486 aa26.24■■□□□ 1.79
TNFAIP2-204ENST00000559255 WIZO95785 1651 aa26.22■■□□□ 1.79
TNFAIP2-204ENST00000559255 ERCC6Q03468 1493 aa26.22■■□□□ 1.79
TNFAIP2-204ENST00000559255 NESP48681 1621 aa26.19■■□□□ 1.78
TNFAIP2-204ENST00000559255 DNAJC5Q9H3Z4 198 aa26.15■■□□□ 1.78
TNFAIP2-204ENST00000559255 LAMC3Q9Y6N6 1575 aa26.05■■□□□ 1.76
TNFAIP2-204ENST00000559255 TOP2AP11388 1531 aaKnown RBP25.98■■□□□ 1.75
TNFAIP2-204ENST00000559255 THOC2Q8NI27 1593 aaKnown RBP25.97■■□□□ 1.75
TNFAIP2-204ENST00000559255 KIF21AQ7Z4S6 1674 aa25.89■■□□□ 1.74
TNFAIP2-204ENST00000559255 PDS5BQ9NTI5 1447 aa25.84■■□□□ 1.73
TNFAIP2-204ENST00000559255 CADPSQ9ULU8 1353 aa25.83■■□□□ 1.73
TNFAIP2-204ENST00000559255 CCDC88BA6NC98 1476 aa25.69■■□□□ 1.7
TNFAIP2-204ENST00000559255 MRC2Q9UBG0 1479 aa25.63■■□□□ 1.69
TNFAIP2-204ENST00000559255 WDR62O43379 1518 aa25.62■■□□□ 1.69
TNFAIP2-204ENST00000559255 CFTRP13569 1480 aa25.58■■□□□ 1.69
TNFAIP2-204ENST00000559255 CEP164Q9UPV0 1460 aa25.52■■□□□ 1.68
TNFAIP2-204ENST00000559255 FANCD2Q9BXW9 1451 aa25.52■■□□□ 1.68
TNFAIP2-204ENST00000559255 CHIC1Q5VXU3 224 aa25.42■■□□□ 1.66
TNFAIP2-204ENST00000559255 PRDM2Q13029 1718 aa25.38■■□□□ 1.65
TNFAIP2-204ENST00000559255 URB2Q14146 1524 aaKnown RBP25.34■■□□□ 1.65
TNFAIP2-204ENST00000559255 TRIM41Q8WV44 630 aa25.09■■□□□ 1.61
TNFAIP2-204ENST00000559255 ABCC8Q09428 1581 aa25.08■■□□□ 1.61
TNFAIP2-204ENST00000559255 TOPBP1Q92547 1522 aa25.07■■□□□ 1.6
TNFAIP2-204ENST00000559255 IFT140Q96RY7 1462 aa25.03■■□□□ 1.6
TNFAIP2-204ENST00000559255 ZNF608Q9ULD9 1512 aaPredicted RBP25■■□□□ 1.59
TNFAIP2-204ENST00000559255 OSCARQ8IYS5 282 aa25■■□□□ 1.59
TNFAIP2-204ENST00000559255 DNMBPQ6XZF7 1577 aa24.98■■□□□ 1.59
TNFAIP2-204ENST00000559255 WRNQ14191 1432 aaPredicted RBP eCLIP24.97■■□□□ 1.59
TNFAIP2-204ENST00000559255 TARBP1Q13395 1621 aaKnown RBP24.89■■□□□ 1.57
TNFAIP2-204ENST00000559255 EIF4G3O43432 1585 aaKnown RBP24.87■■□□□ 1.57
TNFAIP2-204ENST00000559255 SYNJ1O43426 1573 aa24.86■■□□□ 1.57
TNFAIP2-204ENST00000559255 POLA1P09884 1462 aaPredicted RBP24.81■■□□□ 1.56
TNFAIP2-204ENST00000559255 TOP2BQ02880 1626 aa24.79■■□□□ 1.56
TNFAIP2-204ENST00000559255 BIVM-ERCC5R4GMW8 1640 aa24.77■■□□□ 1.56
TNFAIP2-204ENST00000559255 AQRO60306 1485 aaKnown RBP eCLIP24.76■■□□□ 1.551e-7■■■■■ 32.3
TNFAIP2-204ENST00000559255 CUX1P39880 1505 aa24.75■■□□□ 1.55
TNFAIP2-204ENST00000559255 RIMBP3CA6NJZ7 1639 aa24.73■■□□□ 1.55
TNFAIP2-204ENST00000559255 RIMBP3BA6NNM3 1639 aa24.73■■□□□ 1.55
TNFAIP2-204ENST00000559255 RIMBP3Q9UFD9 1639 aa24.73■■□□□ 1.55
TNFAIP2-204ENST00000559255 RAD54L2Q9Y4B4 1467 aa24.7■■□□□ 1.54
TNFAIP2-204ENST00000559255 CHD1O14646 1710 aa24.69■■□□□ 1.54
TNFAIP2-204ENST00000559255 SOGA1O94964 1423 aa24.66■■□□□ 1.54
TNFAIP2-204ENST00000559255 ARHGEF11O15085 1522 aa24.65■■□□□ 1.54
TNFAIP2-204ENST00000559255 FGD5Q6ZNL6 1462 aa24.64■■□□□ 1.54
TNFAIP2-204ENST00000559255 WDR97A6NE52 1622 aa24.63■■□□□ 1.53
TNFAIP2-204ENST00000559255 FAM9AQ8IZU1 332 aaPredicted RBP24.6■■□□□ 1.53
TNFAIP2-204ENST00000559255 TDRD9Q8NDG6 1382 aaKnown RBP24.59■■□□□ 1.53
TNFAIP2-204ENST00000559255 EEA1Q15075 1411 aa24.55■■□□□ 1.52
TNFAIP2-204ENST00000559255 SNAPC4Q5SXM2 1469 aa24.5■■□□□ 1.51
TNFAIP2-204ENST00000559255 MAGI1Q96QZ7 1491 aaPredicted RBP24.47■■□□□ 1.51
TNFAIP2-204ENST00000559255 RUSC2Q8N2Y8 1516 aa24.47■■□□□ 1.51
TNFAIP2-204ENST00000559255 FBLN2P98095 1184 aa24.46■■□□□ 1.51
TNFAIP2-204ENST00000559255 GRIN2BQ13224 1484 aa24.45■■□□□ 1.5
TNFAIP2-204ENST00000559255 CLASP1Q7Z460 1538 aa24.43■■□□□ 1.5
TNFAIP2-204ENST00000559255 ARAP1Q96P48 1450 aa24.42■■□□□ 1.5
TNFAIP2-204ENST00000559255 ABCA10Q8WWZ4 1543 aa24.41■■□□□ 1.5
TNFAIP2-204ENST00000559255 LOC105371045A0A1W2PR82 267 aa24.41■■□□□ 1.5
TNFAIP2-204ENST00000559255 PBRM1Q86U86 1689 aa24.4■■□□□ 1.5
TNFAIP2-204ENST00000559255 ABCA5Q8WWZ7 1642 aa24.39■■□□□ 1.49
TNFAIP2-204ENST00000559255 SYNJ2O15056 1496 aa24.39■■□□□ 1.49
TNFAIP2-204ENST00000559255 CYB5RLQ6IPT4 315 aa24.38■■□□□ 1.49
TNFAIP2-204ENST00000559255 CSRNP3Q8WYN3 585 aa24.38■■□□□ 1.49
TNFAIP2-204ENST00000559255 GAPVD1Q14C86 1478 aa24.38■■□□□ 1.49
TNFAIP2-204ENST00000559255 KIF27Q86VH2 1401 aa24.36■■□□□ 1.49
TNFAIP2-204ENST00000559255 CHMP7Q8WUX9 453 aaPredicted RBP24.35■■□□□ 1.49
TNFAIP2-204ENST00000559255 EHMT2Q96KQ7 1210 aa24.24■■□□□ 1.47
TNFAIP2-204ENST00000559255 KIF21BO75037 1637 aa24.22■■□□□ 1.47
TNFAIP2-204ENST00000559255 GOLGA3Q08378 1498 aa24.18■■□□□ 1.46
TNFAIP2-204ENST00000559255 ADAMTS12P58397 1594 aa24.17■■□□□ 1.46
TNFAIP2-204ENST00000559255 GRIN2AQ12879 1464 aa24.15■■□□□ 1.46
TNFAIP2-204ENST00000559255 PRXQ9BXM0 1461 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms