RNA–Protein interactions for RNA: ENST00000559199.5

SPG21-209, Transcript of SPG21, maspardin, humanhuman

TSL 2 BASIC

Gene SPG21, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-209ENST00000559199 CHD1O14646 1710 aa16.47■□□□□ 0.23
SPG21-209ENST00000559199 TNIKQ9UKE5 1360 aa16.44■□□□□ 0.22
SPG21-209ENST00000559199 RANGAP1P46060 587 aaPredicted RBP16.43■□□□□ 0.22
SPG21-209ENST00000559199 CEP170Q5SW79 1584 aa16.41■□□□□ 0.22
SPG21-209ENST00000559199 CTTNBP2Q8WZ74 1663 aa16.39■□□□□ 0.21
SPG21-209ENST00000559199 NUP160Q12769 1436 aa16.37■□□□□ 0.21
SPG21-209ENST00000559199 CEP162Q5TB80 1403 aa16.36■□□□□ 0.21
SPG21-209ENST00000559199 IQGAP2Q13576 1575 aa16.32■□□□□ 0.2
SPG21-209ENST00000559199 KIAA0586Q9BVV6 1533 aa16.32■□□□□ 0.2
SPG21-209ENST00000559199 CLIP1P30622 1438 aa16.3■□□□□ 0.2
SPG21-209ENST00000559199 CLASP1Q7Z460 1538 aa16.26■□□□□ 0.19
SPG21-209ENST00000559199 P3H3Q8IVL6 736 aa16.26■□□□□ 0.19
SPG21-209ENST00000559199 ARHGAP35Q9NRY4 1499 aa16.26■□□□□ 0.19
SPG21-209ENST00000559199 OSCARQ8IYS5 282 aa16.23■□□□□ 0.19
SPG21-209ENST00000559199 UGGT2Q9NYU1 1516 aa16.23■□□□□ 0.19
SPG21-209ENST00000559199 JPH4Q96JJ6 628 aa16.23■□□□□ 0.19
SPG21-209ENST00000559199 ARAP1Q96P48 1450 aa16.22■□□□□ 0.19
SPG21-209ENST00000559199 SAMD9Q5K651 1589 aa16.22■□□□□ 0.19
SPG21-209ENST00000559199 FHOD3Q2V2M9 1422 aa16.21■□□□□ 0.19
SPG21-209ENST00000559199 DISP1Q96F81 1524 aa16.2■□□□□ 0.18
SPG21-209ENST00000559199 SHROOM2Q13796 1616 aa16.19■□□□□ 0.18
SPG21-209ENST00000559199 EFCAB5A4FU69 1503 aa16.19■□□□□ 0.18
SPG21-209ENST00000559199 ERCC6L2Q5T890 1561 aa16.18■□□□□ 0.18
SPG21-209ENST00000559199 KIAA0556O60303 1618 aa16.17■□□□□ 0.18
SPG21-209ENST00000559199 PRG4Q92954 1404 aaPredicted RBP16.17■□□□□ 0.18
SPG21-209ENST00000559199 TTBK1Q5TCY1 1321 aaPredicted RBP16.15■□□□□ 0.18
SPG21-209ENST00000559199 CARMIL2Q6F5E8 1435 aa16.11■□□□□ 0.17
SPG21-209ENST00000559199 VPS8Q8N3P4 1428 aa16.1■□□□□ 0.17
SPG21-209ENST00000559199 PCF11O94913 1555 aaKnown RBP16.05■□□□□ 0.16
SPG21-209ENST00000559199 FMN1Q68DA7 1419 aa16.03■□□□□ 0.16
SPG21-209ENST00000559199 FOXD1Q16676 465 aa16.03■□□□□ 0.16
SPG21-209ENST00000559199 PTPRGP23470 1445 aa16.02■□□□□ 0.15
SPG21-209ENST00000559199 ATP1B4Q9UN42 357 aaPredicted RBP16.01■□□□□ 0.15
SPG21-209ENST00000559199 PLB1Q6P1J6 1458 aa16.01■□□□□ 0.15
SPG21-209ENST00000559199 ARHGEF11O15085 1522 aa16■□□□□ 0.15
SPG21-209ENST00000559199 CASKIN1Q8WXD9 1431 aa15.99■□□□□ 0.15
SPG21-209ENST00000559199 ARID3CA6NKF2 412 aa15.99■□□□□ 0.15
SPG21-209ENST00000559199 PPARGC1BQ86YN6 1023 aaKnown RBP15.98■□□□□ 0.15
SPG21-209ENST00000559199 LRRIQ1Q96JM4 1722 aa15.97■□□□□ 0.15
SPG21-209ENST00000559199 RIMBP3CA6NJZ7 1639 aa15.97■□□□□ 0.15
SPG21-209ENST00000559199 RIMBP3BA6NNM3 1639 aa15.97■□□□□ 0.15
SPG21-209ENST00000559199 RAPGEF6Q8TEU7 1601 aa15.97■□□□□ 0.15
SPG21-209ENST00000559199 RIMBP3Q9UFD9 1639 aa15.97■□□□□ 0.15
SPG21-209ENST00000559199 FYCO1Q9BQS8 1478 aa15.97■□□□□ 0.15
SPG21-209ENST00000559199 ABCA8O94911 1581 aa15.96■□□□□ 0.15
SPG21-209ENST00000559199 NUP153P49790 1475 aaKnown RBP15.93■□□□□ 0.14
SPG21-209ENST00000559199 HECW1Q76N89 1606 aa15.93■□□□□ 0.14
SPG21-209ENST00000559199 UACAQ9BZF9 1416 aa15.92■□□□□ 0.14
SPG21-209ENST00000559199 CDK13Q14004 1512 aaKnown RBP15.92■□□□□ 0.14
SPG21-209ENST00000559199 EPRSP07814 1512 aaKnown RBP15.89■□□□□ 0.14
SPG21-209ENST00000559199 TIAM1Q13009 1591 aa15.89■□□□□ 0.13
SPG21-209ENST00000559199 ABCC2Q92887 1545 aa15.88■□□□□ 0.13
SPG21-209ENST00000559199 APLP2Q06481 763 aa15.88■□□□□ 0.13
SPG21-209ENST00000559199 KANK4Q5T7N3 995 aaPredicted RBP15.88■□□□□ 0.13
SPG21-209ENST00000559199 CFAP43Q8NDM7 1665 aa15.88■□□□□ 0.13
SPG21-209ENST00000559199 ADCY10Q96PN6 1610 aa15.88■□□□□ 0.13
SPG21-209ENST00000559199 CYB5RLQ6IPT4 315 aa15.87■□□□□ 0.13
SPG21-209ENST00000559199 ATP10BO94823 1461 aa15.85■□□□□ 0.13
SPG21-209ENST00000559199 UHRF1BP1LA0JNW5 1464 aa15.84■□□□□ 0.13
SPG21-209ENST00000559199 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.84■□□□□ 0.13
SPG21-209ENST00000559199 HNRNPUL2Q1KMD3 747 aaKnown RBP15.84■□□□□ 0.13
SPG21-209ENST00000559199 CCDC18Q5T9S5 1454 aa15.84■□□□□ 0.13
SPG21-209ENST00000559199 MAGI3Q5TCQ9 1506 aa15.84■□□□□ 0.13
SPG21-209ENST00000559199 MAP3K1Q13233 1512 aa15.83■□□□□ 0.12
SPG21-209ENST00000559199 LRRC9Q6ZRR7 1453 aa15.81■□□□□ 0.12
SPG21-209ENST00000559199 ZCCHC11Q5TAX3 1644 aaKnown RBP15.8■□□□□ 0.12
SPG21-209ENST00000559199 KDM5BQ9UGL1 1544 aa15.79■□□□□ 0.12
SPG21-209ENST00000559199 DNAJC5Q9H3Z4 198 aa15.78■□□□□ 0.12
SPG21-209ENST00000559199 MTUS2Q5JR59 1369 aa15.77■□□□□ 0.12
SPG21-209ENST00000559199 EHBP1L1Q8N3D4 1523 aa15.74■□□□□ 0.11
SPG21-209ENST00000559199 TROQ12816 1431 aaPredicted RBP15.72■□□□□ 0.11
SPG21-209ENST00000559199 PLEKHD1A6NEE1 506 aa15.72■□□□□ 0.11
SPG21-209ENST00000559199 KIF14Q15058 1648 aa15.72■□□□□ 0.11
SPG21-209ENST00000559199 CDK11AQ9UQ88 783 aaPredicted RBP15.71■□□□□ 0.11
SPG21-209ENST00000559199 NPM1P06748 294 aaKnown RBP eCLIP15.69■□□□□ 0.1
SPG21-209ENST00000559199 NCOA2Q15596 1464 aa15.69■□□□□ 0.1
SPG21-209ENST00000559199 SUPT6HQ7KZ85 1726 aaKnown RBP15.69■□□□□ 0.1
SPG21-209ENST00000559199 PHLDB1Q86UU1 1377 aa15.69■□□□□ 0.1
SPG21-209ENST00000559199 ASXL2Q76L83 1435 aa15.69■□□□□ 0.1
SPG21-209ENST00000559199 KCNH8Q96L42 1107 aa15.67■□□□□ 0.1
SPG21-209ENST00000559199 WDR7Q9Y4E6 1490 aa15.66■□□□□ 0.1
SPG21-209ENST00000559199 TTC37Q6PGP7 1564 aa15.62■□□□□ 0.09
SPG21-209ENST00000559199 ABCC10Q5T3U5 1492 aa15.62■□□□□ 0.09
SPG21-209ENST00000559199 MAPKBP1O60336 1514 aa15.61■□□□□ 0.09
SPG21-209ENST00000559199 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.61■□□□□ 0.09
SPG21-209ENST00000559199 CCNB3Q8WWL7 1395 aa15.59■□□□□ 0.09
SPG21-209ENST00000559199 MYOM3Q5VTT5 1437 aa15.59■□□□□ 0.09
SPG21-209ENST00000559199 GPATCH8Q9UKJ3 1502 aaKnown RBP15.58■□□□□ 0.08
SPG21-209ENST00000559199 CDC42BPAQ5VT25 1732 aa15.57■□□□□ 0.08
SPG21-209ENST00000559199 TRIM26Q12899 539 aaPredicted RBP15.57■□□□□ 0.08
SPG21-209ENST00000559199 FGD6Q6ZV73 1430 aa15.56■□□□□ 0.08
SPG21-209ENST00000559199 RRBP1Q9P2E9 1410 aaKnown RBP15.55■□□□□ 0.08
SPG21-209ENST00000559199 PCGF6Q9BYE7 350 aa15.54■□□□□ 0.08
SPG21-209ENST00000559199 ABCA9Q8IUA7 1624 aa15.53■□□□□ 0.08
SPG21-209ENST00000559199 ZNF644Q9H582 1327 aaPredicted RBP15.53■□□□□ 0.08
SPG21-209ENST00000559199 CDC42BPBQ9Y5S2 1711 aa15.53■□□□□ 0.08
SPG21-209ENST00000559199 PREX2Q70Z35 1606 aa15.52■□□□□ 0.08
SPG21-209ENST00000559199 ITSN2Q9NZM3 1697 aa15.52■□□□□ 0.08
SPG21-209ENST00000559199 MYO5CQ9NQX4 1742 aa15.52■□□□□ 0.08
SPG21-209ENST00000559199 FAM50AQ14320 339 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms