RNA–Protein interactions for RNA: ENST00000559199.5

SPG21-209, Transcript of SPG21, maspardin, humanhuman

TSL 2 BASIC

Gene SPG21, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-209ENST00000559199 NISCHQ9Y2I1 1504 aa23.78■■□□□ 1.4
SPG21-209ENST00000559199 CCDC180Q9P1Z9 1646 aa20.86■□□□□ 0.93
SPG21-209ENST00000559199 ABCC9O60706 1549 aa20.09■□□□□ 0.81
SPG21-209ENST00000559199 AEBP2Q6ZN18 517 aaPredicted RBP20.03■□□□□ 0.8
SPG21-209ENST00000559199 ZCCHC6Q5VYS8 1495 aaKnown RBP19.91■□□□□ 0.78
SPG21-209ENST00000559199 DCAF8L2P0C7V8 631 aa19.77■□□□□ 0.76
SPG21-209ENST00000559199 DCAF1Q9Y4B6 1507 aa19.6■□□□□ 0.73
SPG21-209ENST00000559199 NACADO15069 1562 aa19.5■□□□□ 0.71
SPG21-209ENST00000559199 MYO15BQ96JP2 1530 aa19.48■□□□□ 0.71
SPG21-209ENST00000559199 RB1CC1Q8TDY2 1594 aa19.42■□□□□ 0.7
SPG21-209ENST00000559199 SHROOM4Q9ULL8 1493 aa19.24■□□□□ 0.67
SPG21-209ENST00000559199 SCRIBQ14160 1630 aa19.21■□□□□ 0.67
SPG21-209ENST00000559199 UNC13AQ9UPW8 1703 aa19.07■□□□□ 0.64
SPG21-209ENST00000559199 BICRAQ9NZM4 1560 aa18.9■□□□□ 0.62
SPG21-209ENST00000559199 PABPN1Q86U42 306 aaKnown RBP eCLIP18.89■□□□□ 0.62
SPG21-209ENST00000559199 CHIC1Q5VXU3 224 aa18.86■□□□□ 0.61
SPG21-209ENST00000559199 CECR2Q9BXF3 1484 aa18.55■□□□□ 0.56
SPG21-209ENST00000559199 MROH2BQ7Z745 1585 aa18.39■□□□□ 0.53
SPG21-209ENST00000559199 BAZ1AQ9NRL2 1556 aaPredicted RBP18.36■□□□□ 0.53
SPG21-209ENST00000559199 SMARCA4P51532 1647 aa18.35■□□□□ 0.53
SPG21-209ENST00000559199 EIF4G1Q04637 1599 aaKnown RBP18.33■□□□□ 0.52
SPG21-209ENST00000559199 RSF1Q96T23 1441 aaPredicted RBP18.33■□□□□ 0.52
SPG21-209ENST00000559199 SUPT5HO00267 1087 aaKnown RBP18.31■□□□□ 0.52
SPG21-209ENST00000559199 WIZO95785 1651 aa18.23■□□□□ 0.51
SPG21-209ENST00000559199 CC2D2AQ9P2K1 1620 aa18.16■□□□□ 0.5
SPG21-209ENST00000559199 ATAD2BQ9ULI0 1458 aa18.13■□□□□ 0.49
SPG21-209ENST00000559199 PEG3Q9GZU2 1588 aa18.11■□□□□ 0.49
SPG21-209ENST00000559199 SMARCA2P51531 1590 aa18.08■□□□□ 0.49
SPG21-209ENST00000559199 DNAJC5BQ9UF47 199 aa18.06■□□□□ 0.48
SPG21-209ENST00000559199 NCAPD3P42695 1498 aa18.01■□□□□ 0.47
SPG21-209ENST00000559199 BAZ1BQ9UIG0 1483 aaKnown RBP18■□□□□ 0.47
SPG21-209ENST00000559199 TOP2AP11388 1531 aaKnown RBP17.99■□□□□ 0.47
SPG21-209ENST00000559199 HMGXB3Q12766 1538 aa17.95■□□□□ 0.46
SPG21-209ENST00000559199 CCDC88BA6NC98 1476 aa17.82■□□□□ 0.44
SPG21-209ENST00000559199 NESP48681 1621 aa17.55■□□□□ 0.4
SPG21-209ENST00000559199 CFTRP13569 1480 aa17.53■□□□□ 0.4
SPG21-209ENST00000559199 CADPSQ9ULU8 1353 aa17.53■□□□□ 0.4
SPG21-209ENST00000559199 LAMC3Q9Y6N6 1575 aa17.44■□□□□ 0.38
SPG21-209ENST00000559199 PRDM2Q13029 1718 aa17.41■□□□□ 0.38
SPG21-209ENST00000559199 ABCC8Q09428 1581 aa17.37■□□□□ 0.37
SPG21-209ENST00000559199 FANCD2Q9BXW9 1451 aa17.35■□□□□ 0.37
SPG21-209ENST00000559199 KIF21AQ7Z4S6 1674 aa17.32■□□□□ 0.36
SPG21-209ENST00000559199 PDS5BQ9NTI5 1447 aa17.31■□□□□ 0.36
SPG21-209ENST00000559199 CEP164Q9UPV0 1460 aa17.27■□□□□ 0.35
SPG21-209ENST00000559199 SENP3Q9H4L4 574 aaPredicted RBP17.25■□□□□ 0.35
SPG21-209ENST00000559199 WRNQ14191 1432 aaPredicted RBP eCLIP17.25■□□□□ 0.35
SPG21-209ENST00000559199 SYNJ1O43426 1573 aa17.23■□□□□ 0.35
SPG21-209ENST00000559199 ERCC6Q03468 1493 aa17.22■□□□□ 0.35
SPG21-209ENST00000559199 CUX1P39880 1505 aa17.22■□□□□ 0.35
SPG21-209ENST00000559199 TRIM41Q8WV44 630 aa17.19■□□□□ 0.34
SPG21-209ENST00000559199 URB2Q14146 1524 aaKnown RBP17.18■□□□□ 0.34
SPG21-209ENST00000559199 TOP2BQ02880 1626 aa17.14■□□□□ 0.34
SPG21-209ENST00000559199 MRC2Q9UBG0 1479 aa17.14■□□□□ 0.33
SPG21-209ENST00000559199 BIVM-ERCC5R4GMW8 1640 aa17.13■□□□□ 0.33
SPG21-209ENST00000559199 TOPBP1Q92547 1522 aa17.13■□□□□ 0.33
SPG21-209ENST00000559199 DNMBPQ6XZF7 1577 aa17.13■□□□□ 0.33
SPG21-209ENST00000559199 THOC2Q8NI27 1593 aaKnown RBP17.11■□□□□ 0.33
SPG21-209ENST00000559199 WDR62O43379 1518 aa17.07■□□□□ 0.32
SPG21-209ENST00000559199 FGD5Q6ZNL6 1462 aa17.07■□□□□ 0.32
SPG21-209ENST00000559199 POLA1P09884 1462 aaPredicted RBP17.03■□□□□ 0.32
SPG21-209ENST00000559199 RAD54L2Q9Y4B4 1467 aa17■□□□□ 0.31
SPG21-209ENST00000559199 SOGA1O94964 1423 aa16.97■□□□□ 0.31
SPG21-209ENST00000559199 CUX2O14529 1486 aa16.96■□□□□ 0.31
SPG21-209ENST00000559199 RUSC2Q8N2Y8 1516 aa16.95■□□□□ 0.3
SPG21-209ENST00000559199 FAM9AQ8IZU1 332 aaPredicted RBP16.93■□□□□ 0.3
SPG21-209ENST00000559199 PHF23Q9BUL5 403 aaPredicted RBP16.93■□□□□ 0.3
SPG21-209ENST00000559199 TARBP1Q13395 1621 aaKnown RBP16.91■□□□□ 0.3
SPG21-209ENST00000559199 WDR97A6NE52 1622 aa16.88■□□□□ 0.29
SPG21-209ENST00000559199 ABCA10Q8WWZ4 1543 aa16.88■□□□□ 0.29
SPG21-209ENST00000559199 IFT140Q96RY7 1462 aa16.86■□□□□ 0.29
SPG21-209ENST00000559199 TDRD9Q8NDG6 1382 aaKnown RBP16.85■□□□□ 0.29
SPG21-209ENST00000559199 ZNF608Q9ULD9 1512 aaPredicted RBP16.85■□□□□ 0.29
SPG21-209ENST00000559199 KIF27Q86VH2 1401 aa16.82■□□□□ 0.28
SPG21-209ENST00000559199 AQRO60306 1485 aaKnown RBP eCLIP16.81■□□□□ 0.28
SPG21-209ENST00000559199 ABCA5Q8WWZ7 1642 aa16.79■□□□□ 0.28
SPG21-209ENST00000559199 GAPVD1Q14C86 1478 aa16.76■□□□□ 0.27
SPG21-209ENST00000559199 EEA1Q15075 1411 aa16.76■□□□□ 0.27
SPG21-209ENST00000559199 EIF4G3O43432 1585 aaKnown RBP16.76■□□□□ 0.27
SPG21-209ENST00000559199 EHMT2Q96KQ7 1210 aa16.76■□□□□ 0.27
SPG21-209ENST00000559199 CSRNP3Q8WYN3 585 aa16.75■□□□□ 0.27
SPG21-209ENST00000559199 IGF1RP08069 1367 aa16.73■□□□□ 0.27
SPG21-209ENST00000559199 PBRM1Q86U86 1689 aa16.71■□□□□ 0.27
SPG21-209ENST00000559199 LOC105371045A0A1W2PR82 267 aa16.7■□□□□ 0.26
SPG21-209ENST00000559199 GRIN2BQ13224 1484 aa16.67■□□□□ 0.26
SPG21-209ENST00000559199 ERICH3Q5RHP9 1530 aa16.66■□□□□ 0.26
SPG21-209ENST00000559199 PRXQ9BXM0 1461 aa16.64■□□□□ 0.25
SPG21-209ENST00000559199 SNAPC4Q5SXM2 1469 aa16.64■□□□□ 0.25
SPG21-209ENST00000559199 CARMIL1Q5VZK9 1371 aa16.63■□□□□ 0.25
SPG21-209ENST00000559199 RAPGEF2Q9Y4G8 1499 aa16.63■□□□□ 0.25
SPG21-209ENST00000559199 KIF21BO75037 1637 aa16.61■□□□□ 0.25
SPG21-209ENST00000559199 CUL7Q14999 1698 aa16.6■□□□□ 0.25
SPG21-209ENST00000559199 ADAMTS12P58397 1594 aa16.6■□□□□ 0.25
SPG21-209ENST00000559199 GOLGA3Q08378 1498 aa16.57■□□□□ 0.24
SPG21-209ENST00000559199 FHAD1B1AJZ9 1412 aa16.56■□□□□ 0.24
SPG21-209ENST00000559199 MAGI1Q96QZ7 1491 aaPredicted RBP16.56■□□□□ 0.24
SPG21-209ENST00000559199 UBTFP17480 764 aaKnown RBP16.52■□□□□ 0.24
SPG21-209ENST00000559199 FBLN2P98095 1184 aa16.52■□□□□ 0.23
SPG21-209ENST00000559199 SYNJ2O15056 1496 aa16.51■□□□□ 0.23
SPG21-209ENST00000559199 CHMP7Q8WUX9 453 aaPredicted RBP16.49■□□□□ 0.23
SPG21-209ENST00000559199 GRIN2AQ12879 1464 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms