RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 OSCARQ8IYS5 282 aa25.6■■□□□ 1.69
CDC42BPB-204ENST00000559043 KIAA0586Q9BVV6 1533 aa25.51■■□□□ 1.67
CDC42BPB-204ENST00000559043 CLASP1Q7Z460 1538 aa25.48■■□□□ 1.67
CDC42BPB-204ENST00000559043 TNIKQ9UKE5 1360 aa25.48■■□□□ 1.67
CDC42BPB-204ENST00000559043 CTTNBP2Q8WZ74 1663 aa25.46■■□□□ 1.67
CDC42BPB-204ENST00000559043 RANGAP1P46060 587 aaPredicted RBP25.44■■□□□ 1.66
CDC42BPB-204ENST00000559043 JPH4Q96JJ6 628 aa25.44■■□□□ 1.66
CDC42BPB-204ENST00000559043 IQGAP2Q13576 1575 aa25.42■■□□□ 1.66
CDC42BPB-204ENST00000559043 SHROOM2Q13796 1616 aa25.34■■□□□ 1.65
CDC42BPB-204ENST00000559043 UGGT2Q9NYU1 1516 aa25.32■■□□□ 1.64
CDC42BPB-204ENST00000559043 PRG4Q92954 1404 aaPredicted RBP25.3■■□□□ 1.64
CDC42BPB-204ENST00000559043 ERCC6L2Q5T890 1561 aa25.29■■□□□ 1.64
CDC42BPB-204ENST00000559043 CEP162Q5TB80 1403 aa25.29■■□□□ 1.64
CDC42BPB-204ENST00000559043 P3H3Q8IVL6 736 aa25.29■■□□□ 1.64
CDC42BPB-204ENST00000559043 DISP1Q96F81 1524 aa25.29■■□□□ 1.64
CDC42BPB-204ENST00000559043 CLIP1P30622 1438 aa25.25■■□□□ 1.63
CDC42BPB-204ENST00000559043 ARHGAP35Q9NRY4 1499 aa25.24■■□□□ 1.63
CDC42BPB-204ENST00000559043 SAMD9Q5K651 1589 aa25.22■■□□□ 1.63
CDC42BPB-204ENST00000559043 KIAA0556O60303 1618 aa25.18■■□□□ 1.62
CDC42BPB-204ENST00000559043 CARMIL2Q6F5E8 1435 aa25.17■■□□□ 1.62
CDC42BPB-204ENST00000559043 FHOD3Q2V2M9 1422 aa25.16■■□□□ 1.62
CDC42BPB-204ENST00000559043 EFCAB5A4FU69 1503 aa25.15■■□□□ 1.62
CDC42BPB-204ENST00000559043 ARHGEF11O15085 1522 aa25.15■■□□□ 1.62
CDC42BPB-204ENST00000559043 ARAP1Q96P48 1450 aa25.15■■□□□ 1.62
CDC42BPB-204ENST00000559043 TTBK1Q5TCY1 1321 aaPredicted RBP25.14■■□□□ 1.62
CDC42BPB-204ENST00000559043 DNAJC5Q9H3Z4 198 aa25.13■■□□□ 1.61
CDC42BPB-204ENST00000559043 RIMBP3CA6NJZ7 1639 aa25.09■■□□□ 1.61
CDC42BPB-204ENST00000559043 RIMBP3BA6NNM3 1639 aa25.09■■□□□ 1.61
CDC42BPB-204ENST00000559043 RIMBP3Q9UFD9 1639 aa25.09■■□□□ 1.61
CDC42BPB-204ENST00000559043 PTPRGP23470 1445 aa25.06■■□□□ 1.6
CDC42BPB-204ENST00000559043 CYB5RLQ6IPT4 315 aa24.98■■□□□ 1.59
CDC42BPB-204ENST00000559043 PLB1Q6P1J6 1458 aa24.97■■□□□ 1.59
CDC42BPB-204ENST00000559043 PCGF6Q9BYE7 350 aa24.96■■□□□ 1.59
CDC42BPB-204ENST00000559043 FMN1Q68DA7 1419 aa24.94■■□□□ 1.58
CDC42BPB-204ENST00000559043 VPS8Q8N3P4 1428 aa24.91■■□□□ 1.58
CDC42BPB-204ENST00000559043 ABCA8O94911 1581 aa24.9■■□□□ 1.58
CDC42BPB-204ENST00000559043 UACAQ9BZF9 1416 aa24.9■■□□□ 1.58
CDC42BPB-204ENST00000559043 ATP1B4Q9UN42 357 aaPredicted RBP24.86■■□□□ 1.57
CDC42BPB-204ENST00000559043 PCF11O94913 1555 aaKnown RBP24.86■■□□□ 1.57
CDC42BPB-204ENST00000559043 CASKIN1Q8WXD9 1431 aa24.85■■□□□ 1.57
CDC42BPB-204ENST00000559043 ARID3CA6NKF2 412 aa24.85■■□□□ 1.57
CDC42BPB-204ENST00000559043 RAPGEF6Q8TEU7 1601 aa24.85■■□□□ 1.57
CDC42BPB-204ENST00000559043 NUP153P49790 1475 aaKnown RBP24.83■■□□□ 1.56
CDC42BPB-204ENST00000559043 ADCY10Q96PN6 1610 aa24.82■■□□□ 1.56
CDC42BPB-204ENST00000559043 HRCP23327 699 aa24.82■■□□□ 1.56
CDC42BPB-204ENST00000559043 ABCC2Q92887 1545 aa24.81■■□□□ 1.56
CDC42BPB-204ENST00000559043 UHRF1BP1LA0JNW5 1464 aa24.8■■□□□ 1.56
CDC42BPB-204ENST00000559043 FYCO1Q9BQS8 1478 aa24.79■■□□□ 1.56
CDC42BPB-204ENST00000559043 LRRIQ1Q96JM4 1722 aa24.77■■□□□ 1.56
CDC42BPB-204ENST00000559043 TRIM26Q12899 539 aaPredicted RBP24.76■■□□□ 1.55
CDC42BPB-204ENST00000559043 ATP10BO94823 1461 aa24.75■■□□□ 1.55
CDC42BPB-204ENST00000559043 EPRSP07814 1512 aaKnown RBP24.73■■□□□ 1.55
CDC42BPB-204ENST00000559043 HECW1Q76N89 1606 aa24.73■■□□□ 1.55
CDC42BPB-204ENST00000559043 CDK13Q14004 1512 aaKnown RBP24.73■■□□□ 1.55
CDC42BPB-204ENST00000559043 KDM5BQ9UGL1 1544 aa24.71■■□□□ 1.55
CDC42BPB-204ENST00000559043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.67■■□□□ 1.54
CDC42BPB-204ENST00000559043 HNRNPUL2Q1KMD3 747 aaKnown RBP24.67■■□□□ 1.54
CDC42BPB-204ENST00000559043 ZCCHC11Q5TAX3 1644 aaKnown RBP24.66■■□□□ 1.54
CDC42BPB-204ENST00000559043 KANK4Q5T7N3 995 aaPredicted RBP24.64■■□□□ 1.54
CDC42BPB-204ENST00000559043 NPM1P06748 294 aaKnown RBP eCLIP24.63■■□□□ 1.53
CDC42BPB-204ENST00000559043 CCDC18Q5T9S5 1454 aa24.62■■□□□ 1.53
CDC42BPB-204ENST00000559043 TIAM1Q13009 1591 aa24.6■■□□□ 1.53
CDC42BPB-204ENST00000559043 PPARGC1BQ86YN6 1023 aaKnown RBP24.6■■□□□ 1.53
CDC42BPB-204ENST00000559043 MAGI3Q5TCQ9 1506 aa24.6■■□□□ 1.53
CDC42BPB-204ENST00000559043 APLP2Q06481 763 aa24.58■■□□□ 1.53
CDC42BPB-204ENST00000559043 MAP3K1Q13233 1512 aa24.58■■□□□ 1.53
CDC42BPB-204ENST00000559043 CFAP43Q8NDM7 1665 aa24.56■■□□□ 1.52
CDC42BPB-204ENST00000559043 PLEKHD1A6NEE1 506 aa24.56■■□□□ 1.52
CDC42BPB-204ENST00000559043 ASXL2Q76L83 1435 aa24.55■■□□□ 1.52
CDC42BPB-204ENST00000559043 CDK11AQ9UQ88 783 aaPredicted RBP24.53■■□□□ 1.52
CDC42BPB-204ENST00000559043 LRRC9Q6ZRR7 1453 aa24.52■■□□□ 1.52
CDC42BPB-204ENST00000559043 KCNH8Q96L42 1107 aa24.5■■□□□ 1.51
CDC42BPB-204ENST00000559043 MTUS2Q5JR59 1369 aa24.49■■□□□ 1.51
CDC42BPB-204ENST00000559043 MAPKBP1O60336 1514 aa24.49■■□□□ 1.51
CDC42BPB-204ENST00000559043 TROQ12816 1431 aaPredicted RBP24.49■■□□□ 1.51
CDC42BPB-204ENST00000559043 WDR7Q9Y4E6 1490 aa24.48■■□□□ 1.51
CDC42BPB-204ENST00000559043 KIF14Q15058 1648 aa24.41■■□□□ 1.5
CDC42BPB-204ENST00000559043 EHBP1L1Q8N3D4 1523 aa24.41■■□□□ 1.5
CDC42BPB-204ENST00000559043 NCOA2Q15596 1464 aa24.35■■□□□ 1.49
CDC42BPB-204ENST00000559043 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.35■■□□□ 1.49
CDC42BPB-204ENST00000559043 ABCC10Q5T3U5 1492 aa24.35■■□□□ 1.49
CDC42BPB-204ENST00000559043 FAM69CQ0P6D2 419 aa24.33■■□□□ 1.49
CDC42BPB-204ENST00000559043 SUPT6HQ7KZ85 1726 aaKnown RBP24.32■■□□□ 1.48
CDC42BPB-204ENST00000559043 TTC37Q6PGP7 1564 aa24.31■■□□□ 1.48
CDC42BPB-204ENST00000559043 DIP2BQ9P265 1576 aa24.31■■□□□ 1.48
CDC42BPB-204ENST00000559043 PHLDB1Q86UU1 1377 aa24.3■■□□□ 1.48
CDC42BPB-204ENST00000559043 ABCA9Q8IUA7 1624 aa24.27■■□□□ 1.48
CDC42BPB-204ENST00000559043 KIF13AQ9H1H9 1805 aa24.27■■□□□ 1.48
CDC42BPB-204ENST00000559043 GLI2P10070 1586 aa24.26■■□□□ 1.47
CDC42BPB-204ENST00000559043 GPATCH8Q9UKJ3 1502 aaKnown RBP24.26■■□□□ 1.47
CDC42BPB-204ENST00000559043 CCNB3Q8WWL7 1395 aa24.24■■□□□ 1.47
CDC42BPB-204ENST00000559043 TRHP20396 242 aaPredicted RBP24.23■■□□□ 1.47
CDC42BPB-204ENST00000559043 CD109Q6YHK3 1445 aa24.23■■□□□ 1.47
CDC42BPB-204ENST00000559043 CDC42BPAQ5VT25 1732 aa24.21■■□□□ 1.47
CDC42BPB-204ENST00000559043 PLCH2O75038 1416 aa24.2■■□□□ 1.46
CDC42BPB-204ENST00000559043 MAP3K4Q9Y6R4 1608 aa24.2■■□□□ 1.46
CDC42BPB-204ENST00000559043 MYOM3Q5VTT5 1437 aa24.2■■□□□ 1.46
CDC42BPB-204ENST00000559043 CDC42BPBQ9Y5S2 1711 aa24.18■■□□□ 1.46
CDC42BPB-204ENST00000559043 ZNF644Q9H582 1327 aaPredicted RBP24.17■■□□□ 1.46
CDC42BPB-204ENST00000559043 CFDP1Q9UEE9 299 aaPredicted RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms