RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 PRG4Q92954 1404 aaPredicted RBP36.71■■■■□ 3.47
CRNDE-205ENST00000558952 CARMIL1Q5VZK9 1371 aa36.71■■■■□ 3.47
CRNDE-205ENST00000558952 TRHP20396 242 aaPredicted RBP36.71■■■■□ 3.47
CRNDE-205ENST00000558952 KIAA0586Q9BVV6 1533 aa36.64■■■■□ 3.46
CRNDE-205ENST00000558952 RAPGEF2Q9Y4G8 1499 aa36.46■■■■□ 3.43
CRNDE-205ENST00000558952 IQGAP2Q13576 1575 aa36.38■■■■□ 3.41
CRNDE-205ENST00000558952 CARMIL2Q6F5E8 1435 aa36.32■■■■□ 3.4
CRNDE-205ENST00000558952 NPM1P06748 294 aaKnown RBP eCLIP36.25■■■■□ 3.39
CRNDE-205ENST00000558952 PTPRGP23470 1445 aa36.22■■■■□ 3.39
CRNDE-205ENST00000558952 TNIKQ9UKE5 1360 aa36.2■■■■□ 3.39
CRNDE-205ENST00000558952 TTBK1Q5TCY1 1321 aaPredicted RBP36.18■■■■□ 3.38
CRNDE-205ENST00000558952 ADCY10Q96PN6 1610 aa36.18■■■■□ 3.38
CRNDE-205ENST00000558952 PRXQ9BXM0 1461 aa36.18■■■■□ 3.38
CRNDE-205ENST00000558952 UGGT2Q9NYU1 1516 aa36.14■■■■□ 3.38
CRNDE-205ENST00000558952 CTTNBP2Q8WZ74 1663 aa36.12■■■■□ 3.37
CRNDE-205ENST00000558952 DISP1Q96F81 1524 aa36.12■■■■□ 3.37
CRNDE-205ENST00000558952 CSRNP3Q8WYN3 585 aa36.07■■■■□ 3.36
CRNDE-205ENST00000558952 MAPKBP1O60336 1514 aa36.06■■■■□ 3.36
CRNDE-205ENST00000558952 EEA1Q15075 1411 aa36.05■■■■□ 3.36
CRNDE-205ENST00000558952 KIAA0556O60303 1618 aa36.03■■■■□ 3.36
CRNDE-205ENST00000558952 KIF13AQ9H1H9 1805 aa35.97■■■■□ 3.35
CRNDE-205ENST00000558952 GOLGA3Q08378 1498 aa35.97■■■■□ 3.35
CRNDE-205ENST00000558952 UACAQ9BZF9 1416 aa35.96■■■■□ 3.35
CRNDE-205ENST00000558952 ABCC10Q5T3U5 1492 aa35.96■■■■□ 3.35
CRNDE-205ENST00000558952 ABCC2Q92887 1545 aa35.94■■■■□ 3.34
CRNDE-205ENST00000558952 UHRF1BP1LA0JNW5 1464 aa35.93■■■■□ 3.34
CRNDE-205ENST00000558952 FAM69CQ0P6D2 419 aa35.93■■■■□ 3.34
CRNDE-205ENST00000558952 DIP2BQ9P265 1576 aa35.88■■■■□ 3.33
CRNDE-205ENST00000558952 FAM9AQ8IZU1 332 aaPredicted RBP35.87■■■■□ 3.33
CRNDE-205ENST00000558952 CHIC1Q5VXU3 224 aa35.84■■■■□ 3.33
CRNDE-205ENST00000558952 ASXL2Q76L83 1435 aa35.76■■■■□ 3.32
CRNDE-205ENST00000558952 PLB1Q6P1J6 1458 aa35.76■■■■□ 3.32
CRNDE-205ENST00000558952 KDM5BQ9UGL1 1544 aa35.76■■■■□ 3.31
CRNDE-205ENST00000558952 ZCCHC11Q5TAX3 1644 aaKnown RBP35.68■■■■□ 3.3
CRNDE-205ENST00000558952 KIF21BO75037 1637 aa35.68■■■■□ 3.3
CRNDE-205ENST00000558952 P3H3Q8IVL6 736 aa35.66■■■■□ 3.3
CRNDE-205ENST00000558952 ABCA8O94911 1581 aa35.64■■■■□ 3.3
CRNDE-205ENST00000558952 SAMD9Q5K651 1589 aa35.62■■■■□ 3.29
CRNDE-205ENST00000558952 GLI2P10070 1586 aa35.59■■■■□ 3.29
CRNDE-205ENST00000558952 TSPOAP1O95153 1857 aa35.58■■■■□ 3.29
CRNDE-205ENST00000558952 RANGAP1P46060 587 aaPredicted RBP35.57■■■■□ 3.28
CRNDE-205ENST00000558952 EPRSP07814 1512 aaKnown RBP35.54■■■■□ 3.28
CRNDE-205ENST00000558952 WDR7Q9Y4E6 1490 aa35.52■■■■□ 3.28
CRNDE-205ENST00000558952 KDM6BO15054 1643 aa35.46■■■■□ 3.27
CRNDE-205ENST00000558952 EHMT2Q96KQ7 1210 aa35.46■■■■□ 3.27
CRNDE-205ENST00000558952 UBTFP17480 764 aaKnown RBP35.45■■■■□ 3.27
CRNDE-205ENST00000558952 EFCAB5A4FU69 1503 aa35.42■■■■□ 3.26
CRNDE-205ENST00000558952 FHOD3Q2V2M9 1422 aa35.41■■■■□ 3.26
CRNDE-205ENST00000558952 MAP3K4Q9Y6R4 1608 aa35.41■■■■□ 3.26
CRNDE-205ENST00000558952 RAPGEF6Q8TEU7 1601 aa35.4■■■■□ 3.26
CRNDE-205ENST00000558952 ARID3CA6NKF2 412 aa35.4■■■■□ 3.26
CRNDE-205ENST00000558952 PPRC1Q5VV67 1664 aaKnown RBP35.38■■■■□ 3.25
CRNDE-205ENST00000558952 KCNH8Q96L42 1107 aa35.36■■■■□ 3.25
CRNDE-205ENST00000558952 ATP10BO94823 1461 aa35.35■■■■□ 3.25
CRNDE-205ENST00000558952 TEX14Q8IWB6 1497 aa35.35■■■■□ 3.25
CRNDE-205ENST00000558952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.29■■■■□ 3.24
CRNDE-205ENST00000558952 HNRNPUL2Q1KMD3 747 aaKnown RBP35.29■■■■□ 3.24
CRNDE-205ENST00000558952 CD109Q6YHK3 1445 aa35.25■■■■□ 3.23
CRNDE-205ENST00000558952 CFAP43Q8NDM7 1665 aa35.25■■■■□ 3.23
CRNDE-205ENST00000558952 NUP153P49790 1475 aaKnown RBP35.24■■■■□ 3.23
CRNDE-205ENST00000558952 AEBP2Q6ZN18 517 aaPredicted RBP35.23■■■■□ 3.23
CRNDE-205ENST00000558952 MAGI3Q5TCQ9 1506 aa35.18■■■■□ 3.22
CRNDE-205ENST00000558952 ARHGAP35Q9NRY4 1499 aa35.13■■■■□ 3.21
CRNDE-205ENST00000558952 FMN1Q68DA7 1419 aa35.11■■■■□ 3.21
CRNDE-205ENST00000558952 COL17A1Q9UMD9 1497 aaPredicted RBP35.09■■■■□ 3.21
CRNDE-205ENST00000558952 ABCA9Q8IUA7 1624 aa35.07■■■■□ 3.21
CRNDE-205ENST00000558952 PLEKHD1A6NEE1 506 aa35.07■■■■□ 3.2
CRNDE-205ENST00000558952 ATP1B4Q9UN42 357 aaPredicted RBP35.02■■■■□ 3.2
CRNDE-205ENST00000558952 HECW1Q76N89 1606 aa34.99■■■■□ 3.19
CRNDE-205ENST00000558952 CDK13Q14004 1512 aaKnown RBP34.96■■■■□ 3.19
CRNDE-205ENST00000558952 PHLDB1Q86UU1 1377 aa34.91■■■■□ 3.18
CRNDE-205ENST00000558952 ARAP3Q8WWN8 1544 aa34.88■■■■□ 3.17
CRNDE-205ENST00000558952 NEO1Q92859 1461 aa34.86■■■■□ 3.17
CRNDE-205ENST00000558952 CDK11AQ9UQ88 783 aaPredicted RBP34.85■■■■□ 3.17
CRNDE-205ENST00000558952 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.83■■■■□ 3.17
CRNDE-205ENST00000558952 KDM4FA0A1W2PPD8 638 aa34.81■■■■□ 3.16
CRNDE-205ENST00000558952 CLIP1P30622 1438 aa34.81■■■■□ 3.16
CRNDE-205ENST00000558952 TTC37Q6PGP7 1564 aa34.78■■■■□ 3.16
CRNDE-205ENST00000558952 CASKIN1Q8WXD9 1431 aa34.75■■■■□ 3.15
CRNDE-205ENST00000558952 PCF11O94913 1555 aaKnown RBP34.74■■■■□ 3.15
CRNDE-205ENST00000558952 CFAP74Q9C0B2 1584 aa34.74■■■■□ 3.15
CRNDE-205ENST00000558952 FANCAO15360 1455 aa34.72■■■■□ 3.15
CRNDE-205ENST00000558952 ADGRL1O94910 1474 aa34.71■■■■□ 3.15
CRNDE-205ENST00000558952 CCDC18Q5T9S5 1454 aa34.71■■■■□ 3.15
CRNDE-205ENST00000558952 RAPGEF3O95398 923 aa34.7■■■■□ 3.15
CRNDE-205ENST00000558952 TROQ12816 1431 aaPredicted RBP34.69■■■■□ 3.14
CRNDE-205ENST00000558952 LRRIQ1Q96JM4 1722 aa34.69■■■■□ 3.14
CRNDE-205ENST00000558952 AKNAQ7Z591 1439 aa34.68■■■■□ 3.14
CRNDE-205ENST00000558952 KIF14Q15058 1648 aa34.67■■■■□ 3.14
CRNDE-205ENST00000558952 FYCO1Q9BQS8 1478 aa34.66■■■■□ 3.14
CRNDE-205ENST00000558952 PLCH2O75038 1416 aa34.64■■■■□ 3.14
CRNDE-205ENST00000558952 DENND4BO75064 1496 aaPredicted RBP34.63■■■■□ 3.13
CRNDE-205ENST00000558952 FRMPD1Q5SYB0 1578 aa34.6■■■■□ 3.13
CRNDE-205ENST00000558952 MYO5CQ9NQX4 1742 aa34.58■■■■□ 3.13
CRNDE-205ENST00000558952 EFCAB2Q5VUJ9 269 aa34.54■■■■□ 3.12
CRNDE-205ENST00000558952 CEP162Q5TB80 1403 aa34.53■■■■□ 3.12
CRNDE-205ENST00000558952 RICTORQ6R327 1708 aa34.52■■■■□ 3.12
CRNDE-205ENST00000558952 SCAPERQ9BY12 1400 aa34.48■■■■□ 3.11
CRNDE-205ENST00000558952 ARHGAP5Q13017 1502 aa34.48■■■■□ 3.11
CRNDE-205ENST00000558952 ZMYM4Q5VZL5 1548 aa34.43■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms