RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 KIAA0586Q9BVV6 1533 aa29.46■■■□□ 2.31
LRRC28-210ENST00000558879 CARMIL1Q5VZK9 1371 aa29.4■■■□□ 2.3
LRRC28-210ENST00000558879 JPH4Q96JJ6 628 aa29.4■■■□□ 2.3
LRRC28-210ENST00000558879 TRHP20396 242 aaPredicted RBP29.34■■■□□ 2.29
LRRC28-210ENST00000558879 IQGAP2Q13576 1575 aa29.32■■■□□ 2.28
LRRC28-210ENST00000558879 KIF13AQ9H1H9 1805 aa29.29■■■□□ 2.28
LRRC28-210ENST00000558879 ADCY10Q96PN6 1610 aa29.27■■■□□ 2.28
LRRC28-210ENST00000558879 CTTNBP2Q8WZ74 1663 aa29.25■■■□□ 2.27
LRRC28-210ENST00000558879 RAPGEF2Q9Y4G8 1499 aa29.25■■■□□ 2.27
LRRC28-210ENST00000558879 MAPKBP1O60336 1514 aa29.15■■■□□ 2.26
LRRC28-210ENST00000558879 UGGT2Q9NYU1 1516 aa29.14■■■□□ 2.25
LRRC28-210ENST00000558879 DISP1Q96F81 1524 aa29.11■■■□□ 2.25
LRRC28-210ENST00000558879 CARMIL2Q6F5E8 1435 aa29.09■■■□□ 2.25
LRRC28-210ENST00000558879 PRXQ9BXM0 1461 aa29.09■■■□□ 2.25
LRRC28-210ENST00000558879 KIAA0556O60303 1618 aa29.09■■■□□ 2.25
LRRC28-210ENST00000558879 DIP2BQ9P265 1576 aa29.05■■■□□ 2.24
LRRC28-210ENST00000558879 TNIKQ9UKE5 1360 aa29.04■■■□□ 2.24
LRRC28-210ENST00000558879 PTPRGP23470 1445 aa29.02■■■□□ 2.24
LRRC28-210ENST00000558879 ABCC10Q5T3U5 1492 aa28.99■■■□□ 2.23
LRRC28-210ENST00000558879 UHRF1BP1LA0JNW5 1464 aa28.96■■■□□ 2.23
LRRC28-210ENST00000558879 ABCC2Q92887 1545 aa28.94■■■□□ 2.22
LRRC28-210ENST00000558879 NPM1P06748 294 aaKnown RBP eCLIP28.89■■■□□ 2.22
LRRC28-210ENST00000558879 UACAQ9BZF9 1416 aa28.87■■■□□ 2.21
LRRC28-210ENST00000558879 EEA1Q15075 1411 aa28.86■■■□□ 2.21
LRRC28-210ENST00000558879 ZCCHC11Q5TAX3 1644 aaKnown RBP28.85■■■□□ 2.21
LRRC28-210ENST00000558879 GOLGA3Q08378 1498 aa28.85■■■□□ 2.21
LRRC28-210ENST00000558879 TSPOAP1O95153 1857 aa28.83■■■□□ 2.21
LRRC28-210ENST00000558879 KDM5BQ9UGL1 1544 aa28.83■■■□□ 2.21
LRRC28-210ENST00000558879 TTBK1Q5TCY1 1321 aaPredicted RBP28.78■■■□□ 2.2
LRRC28-210ENST00000558879 ABCA8O94911 1581 aa28.77■■■□□ 2.2
LRRC28-210ENST00000558879 GLI2P10070 1586 aa28.77■■■□□ 2.2
LRRC28-210ENST00000558879 SAMD9Q5K651 1589 aa28.77■■■□□ 2.2
LRRC28-210ENST00000558879 PPRC1Q5VV67 1664 aaKnown RBP28.77■■■□□ 2.2
LRRC28-210ENST00000558879 FAM69CQ0P6D2 419 aa28.76■■■□□ 2.19
LRRC28-210ENST00000558879 ASXL2Q76L83 1435 aa28.76■■■□□ 2.19
LRRC28-210ENST00000558879 PLB1Q6P1J6 1458 aa28.75■■■□□ 2.19
LRRC28-210ENST00000558879 CSRNP3Q8WYN3 585 aa28.75■■■□□ 2.19
LRRC28-210ENST00000558879 KIF21BO75037 1637 aa28.74■■■□□ 2.19
LRRC28-210ENST00000558879 MAP3K4Q9Y6R4 1608 aa28.69■■■□□ 2.18
LRRC28-210ENST00000558879 KDM6BO15054 1643 aa28.66■■■□□ 2.18
LRRC28-210ENST00000558879 EPRSP07814 1512 aaKnown RBP28.64■■■□□ 2.17
LRRC28-210ENST00000558879 WDR7Q9Y4E6 1490 aa28.58■■■□□ 2.17
LRRC28-210ENST00000558879 RAPGEF6Q8TEU7 1601 aa28.54■■■□□ 2.16
LRRC28-210ENST00000558879 CFAP43Q8NDM7 1665 aa28.54■■■□□ 2.16
LRRC28-210ENST00000558879 CHIC1Q5VXU3 224 aa28.53■■■□□ 2.16
LRRC28-210ENST00000558879 EFCAB5A4FU69 1503 aa28.49■■■□□ 2.15
LRRC28-210ENST00000558879 FAM9AQ8IZU1 332 aaPredicted RBP28.46■■■□□ 2.15
LRRC28-210ENST00000558879 TEX14Q8IWB6 1497 aa28.43■■■□□ 2.14
LRRC28-210ENST00000558879 ATP10BO94823 1461 aa28.41■■■□□ 2.14
LRRC28-210ENST00000558879 P3H3Q8IVL6 736 aa28.41■■■□□ 2.14
LRRC28-210ENST00000558879 FHOD3Q2V2M9 1422 aa28.4■■■□□ 2.14
LRRC28-210ENST00000558879 NUP153P49790 1475 aaKnown RBP28.36■■■□□ 2.13
LRRC28-210ENST00000558879 MAGI3Q5TCQ9 1506 aa28.36■■■□□ 2.13
LRRC28-210ENST00000558879 ABCA9Q8IUA7 1624 aa28.35■■■□□ 2.13
LRRC28-210ENST00000558879 COL17A1Q9UMD9 1497 aaPredicted RBP28.32■■■□□ 2.12
LRRC28-210ENST00000558879 CD109Q6YHK3 1445 aa28.27■■■□□ 2.12
LRRC28-210ENST00000558879 ARHGAP35Q9NRY4 1499 aa28.22■■■□□ 2.11
LRRC28-210ENST00000558879 RANGAP1P46060 587 aaPredicted RBP28.22■■■□□ 2.11
LRRC28-210ENST00000558879 ARID3CA6NKF2 412 aa28.21■■■□□ 2.11
LRRC28-210ENST00000558879 KCNH8Q96L42 1107 aa28.19■■■□□ 2.1
LRRC28-210ENST00000558879 HECW1Q76N89 1606 aa28.18■■■□□ 2.1
LRRC28-210ENST00000558879 AEBP2Q6ZN18 517 aaPredicted RBP28.17■■■□□ 2.1
LRRC28-210ENST00000558879 LRRIQ1Q96JM4 1722 aa28.15■■■□□ 2.1
LRRC28-210ENST00000558879 UBTFP17480 764 aaKnown RBP28.14■■■□□ 2.1
LRRC28-210ENST00000558879 CDK13Q14004 1512 aaKnown RBP28.13■■■□□ 2.09
LRRC28-210ENST00000558879 ARAP3Q8WWN8 1544 aa28.13■■■□□ 2.09
LRRC28-210ENST00000558879 FMN1Q68DA7 1419 aa28.11■■■□□ 2.09
LRRC28-210ENST00000558879 EHMT2Q96KQ7 1210 aa28.09■■■□□ 2.09
LRRC28-210ENST00000558879 TTC37Q6PGP7 1564 aa28.08■■■□□ 2.09
LRRC28-210ENST00000558879 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.07■■■□□ 2.08
LRRC28-210ENST00000558879 NEO1Q92859 1461 aa28.06■■■□□ 2.08
LRRC28-210ENST00000558879 CFAP74Q9C0B2 1584 aa28.05■■■□□ 2.08
LRRC28-210ENST00000558879 FRMPD1Q5SYB0 1578 aa28.03■■■□□ 2.08
LRRC28-210ENST00000558879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.03■■■□□ 2.08
LRRC28-210ENST00000558879 HNRNPUL2Q1KMD3 747 aaKnown RBP28.03■■■□□ 2.08
LRRC28-210ENST00000558879 KDM4FA0A1W2PPD8 638 aa28.02■■■□□ 2.08
LRRC28-210ENST00000558879 PHLDB1Q86UU1 1377 aa28.01■■■□□ 2.07
LRRC28-210ENST00000558879 ADGRL1O94910 1474 aa28.01■■■□□ 2.07
LRRC28-210ENST00000558879 PCF11O94913 1555 aaKnown RBP28■■■□□ 2.07
LRRC28-210ENST00000558879 RICTORQ6R327 1708 aa28■■■□□ 2.07
LRRC28-210ENST00000558879 MYO5CQ9NQX4 1742 aa27.98■■■□□ 2.07
LRRC28-210ENST00000558879 PLEKHD1A6NEE1 506 aa27.96■■■□□ 2.07
LRRC28-210ENST00000558879 KIF14Q15058 1648 aa27.93■■■□□ 2.06
LRRC28-210ENST00000558879 FANCAO15360 1455 aa27.89■■■□□ 2.06
LRRC28-210ENST00000558879 CASKIN1Q8WXD9 1431 aa27.87■■■□□ 2.05
LRRC28-210ENST00000558879 CCDC18Q5T9S5 1454 aa27.85■■■□□ 2.05
LRRC28-210ENST00000558879 ZMYM4Q5VZL5 1548 aa27.84■■■□□ 2.05
LRRC28-210ENST00000558879 ARHGEF40Q8TER5 1519 aa27.84■■■□□ 2.05
LRRC28-210ENST00000558879 TROQ12816 1431 aaPredicted RBP27.84■■■□□ 2.05
LRRC28-210ENST00000558879 AKNAQ7Z591 1439 aa27.84■■■□□ 2.05
LRRC28-210ENST00000558879 FYCO1Q9BQS8 1478 aa27.83■■■□□ 2.05
LRRC28-210ENST00000558879 CLIP1P30622 1438 aa27.82■■■□□ 2.04
LRRC28-210ENST00000558879 PLCH2O75038 1416 aa27.8■■■□□ 2.04
LRRC28-210ENST00000558879 DENND4BO75064 1496 aaPredicted RBP27.8■■■□□ 2.04
LRRC28-210ENST00000558879 CDC42BPBQ9Y5S2 1711 aa27.8■■■□□ 2.04
LRRC28-210ENST00000558879 PREX2Q70Z35 1606 aa27.78■■■□□ 2.04
LRRC28-210ENST00000558879 RAPGEF3O95398 923 aa27.77■■■□□ 2.04
LRRC28-210ENST00000558879 ADAMTSL3P82987 1691 aa27.77■■■□□ 2.04
LRRC28-210ENST00000558879 BCORL1Q5H9F3 1711 aa27.75■■■□□ 2.03
LRRC28-210ENST00000558879 ATP1B4Q9UN42 357 aaPredicted RBP27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms