RNA–Protein interactions for RNA: ENST00000558488.1

RNF213-206, Transcript of ring finger protein 213, humanhuman

TSL 3

Gene RNF213, Length 526 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-206ENST00000558488 SYNJ2O15056 1496 aa29.61■■■□□ 2.33
RNF213-206ENST00000558488 KIF21BO75037 1637 aa29.59■■■□□ 2.33
RNF213-206ENST00000558488 RAPGEF2Q9Y4G8 1499 aa29.55■■■□□ 2.32
RNF213-206ENST00000558488 CHMP7Q8WUX9 453 aaPredicted RBP29.54■■■□□ 2.32
RNF213-206ENST00000558488 GRIN2AQ12879 1464 aa29.5■■■□□ 2.31
RNF213-206ENST00000558488 GOLGA3Q08378 1498 aa29.44■■■□□ 2.3
RNF213-206ENST00000558488 ERCC6L2Q5T890 1561 aa29.42■■■□□ 2.3
RNF213-206ENST00000558488 NUP160Q12769 1436 aa29.37■■■□□ 2.29
RNF213-206ENST00000558488 CEP170Q5SW79 1584 aa29.3■■■□□ 2.28
RNF213-206ENST00000558488 KIAA0586Q9BVV6 1533 aa29.25■■■□□ 2.27
RNF213-206ENST00000558488 KIF13AQ9H1H9 1805 aa29.24■■■□□ 2.27
RNF213-206ENST00000558488 CTTNBP2Q8WZ74 1663 aa29.24■■■□□ 2.27
RNF213-206ENST00000558488 TNIKQ9UKE5 1360 aa29.18■■■□□ 2.26
RNF213-206ENST00000558488 UBTFP17480 764 aaKnown RBP29.17■■■□□ 2.26
RNF213-206ENST00000558488 IQGAP2Q13576 1575 aa29.17■■■□□ 2.26
RNF213-206ENST00000558488 LOC105371045A0A1W2PR82 267 aa29.09■■■□□ 2.25
RNF213-206ENST00000558488 EHMT2Q96KQ7 1210 aa29.08■■■□□ 2.25
RNF213-206ENST00000558488 SHROOM2Q13796 1616 aa29.07■■■□□ 2.24
RNF213-206ENST00000558488 UGGT2Q9NYU1 1516 aa29.06■■■□□ 2.24
RNF213-206ENST00000558488 JPH4Q96JJ6 628 aa28.98■■■□□ 2.23
RNF213-206ENST00000558488 EFCAB5A4FU69 1503 aa28.97■■■□□ 2.23
RNF213-206ENST00000558488 SAMD9Q5K651 1589 aa28.93■■■□□ 2.22
RNF213-206ENST00000558488 CEP162Q5TB80 1403 aa28.92■■■□□ 2.22
RNF213-206ENST00000558488 CARMIL2Q6F5E8 1435 aa28.9■■■□□ 2.22
RNF213-206ENST00000558488 DISP1Q96F81 1524 aa28.89■■■□□ 2.22
RNF213-206ENST00000558488 CLIP1P30622 1438 aa28.88■■■□□ 2.21
RNF213-206ENST00000558488 PRG4Q92954 1404 aaPredicted RBP28.88■■■□□ 2.21
RNF213-206ENST00000558488 KIAA0556O60303 1618 aa28.88■■■□□ 2.21
RNF213-206ENST00000558488 KDM4FA0A1W2PPD8 638 aa28.85■■■□□ 2.21
RNF213-206ENST00000558488 ARHGAP35Q9NRY4 1499 aa28.85■■■□□ 2.21
RNF213-206ENST00000558488 ABCC10Q5T3U5 1492 aa28.8■■■□□ 2.2
RNF213-206ENST00000558488 FAM69CQ0P6D2 419 aa28.79■■■□□ 2.2
RNF213-206ENST00000558488 ILDR1Q86SU0 546 aaPredicted RBP28.78■■■□□ 2.2
RNF213-206ENST00000558488 DIP2BQ9P265 1576 aa28.78■■■□□ 2.2
RNF213-206ENST00000558488 RANGAP1P46060 587 aaPredicted RBP28.74■■■□□ 2.19
RNF213-206ENST00000558488 TSPOAP1O95153 1857 aa28.74■■■□□ 2.19
RNF213-206ENST00000558488 ADCY10Q96PN6 1610 aa28.72■■■□□ 2.19
RNF213-206ENST00000558488 FHOD3Q2V2M9 1422 aa28.7■■■□□ 2.19
RNF213-206ENST00000558488 MAPKBP1O60336 1514 aa28.7■■■□□ 2.19
RNF213-206ENST00000558488 KDM6BO15054 1643 aa28.69■■■□□ 2.18
RNF213-206ENST00000558488 FMN1Q68DA7 1419 aa28.66■■■□□ 2.18
RNF213-206ENST00000558488 PTPRGP23470 1445 aa28.64■■■□□ 2.18
RNF213-206ENST00000558488 P3H3Q8IVL6 736 aa28.63■■■□□ 2.17
RNF213-206ENST00000558488 VPS8Q8N3P4 1428 aa28.57■■■□□ 2.16
RNF213-206ENST00000558488 NPM1P06748 294 aaKnown RBP eCLIP28.53■■■□□ 2.16
RNF213-206ENST00000558488 ABCA8O94911 1581 aa28.53■■■□□ 2.16
RNF213-206ENST00000558488 UACAQ9BZF9 1416 aa28.5■■■□□ 2.15
RNF213-206ENST00000558488 UHRF1BP1LA0JNW5 1464 aa28.49■■■□□ 2.15
RNF213-206ENST00000558488 FYCO1Q9BQS8 1478 aa28.49■■■□□ 2.15
RNF213-206ENST00000558488 RAPGEF6Q8TEU7 1601 aa28.49■■■□□ 2.15
RNF213-206ENST00000558488 CASKIN1Q8WXD9 1431 aa28.49■■■□□ 2.15
RNF213-206ENST00000558488 PLB1Q6P1J6 1458 aa28.47■■■□□ 2.15
RNF213-206ENST00000558488 PCF11O94913 1555 aaKnown RBP28.47■■■□□ 2.15
RNF213-206ENST00000558488 ABCC2Q92887 1545 aa28.47■■■□□ 2.15
RNF213-206ENST00000558488 HECW1Q76N89 1606 aa28.45■■■□□ 2.14
RNF213-206ENST00000558488 PPRC1Q5VV67 1664 aaKnown RBP28.44■■■□□ 2.14
RNF213-206ENST00000558488 TTBK1Q5TCY1 1321 aaPredicted RBP28.42■■■□□ 2.14
RNF213-206ENST00000558488 ADGRL1O94910 1474 aa28.38■■■□□ 2.13
RNF213-206ENST00000558488 NUP153P49790 1475 aaKnown RBP28.38■■■□□ 2.13
RNF213-206ENST00000558488 CCDC18Q5T9S5 1454 aa28.34■■■□□ 2.13
RNF213-206ENST00000558488 KDM5BQ9UGL1 1544 aa28.33■■■□□ 2.13
RNF213-206ENST00000558488 EPRSP07814 1512 aaKnown RBP28.3■■■□□ 2.12
RNF213-206ENST00000558488 MAP3K1Q13233 1512 aa28.3■■■□□ 2.12
RNF213-206ENST00000558488 COL17A1Q9UMD9 1497 aaPredicted RBP28.29■■■□□ 2.12
RNF213-206ENST00000558488 HECW2Q9P2P5 1572 aa28.28■■■□□ 2.12
RNF213-206ENST00000558488 ATP10BO94823 1461 aa28.26■■■□□ 2.11
RNF213-206ENST00000558488 LRRIQ1Q96JM4 1722 aa28.23■■■□□ 2.11
RNF213-206ENST00000558488 CFAP43Q8NDM7 1665 aa28.23■■■□□ 2.11
RNF213-206ENST00000558488 ZCCHC11Q5TAX3 1644 aaKnown RBP28.23■■■□□ 2.11
RNF213-206ENST00000558488 ASXL2Q76L83 1435 aa28.23■■■□□ 2.11
RNF213-206ENST00000558488 ATP1B4Q9UN42 357 aaPredicted RBP28.22■■■□□ 2.11
RNF213-206ENST00000558488 GLI2P10070 1586 aa28.21■■■□□ 2.11
RNF213-206ENST00000558488 TIAM1Q13009 1591 aa28.21■■■□□ 2.11
RNF213-206ENST00000558488 CDK13Q14004 1512 aaKnown RBP28.21■■■□□ 2.11
RNF213-206ENST00000558488 APLP2Q06481 763 aa28.16■■■□□ 2.1
RNF213-206ENST00000558488 CDK11AQ9UQ88 783 aaPredicted RBP28.13■■■□□ 2.09
RNF213-206ENST00000558488 MAP3K4Q9Y6R4 1608 aa28.11■■■□□ 2.09
RNF213-206ENST00000558488 EHBP1L1Q8N3D4 1523 aa28.08■■■□□ 2.09
RNF213-206ENST00000558488 ARID3CA6NKF2 412 aa28.08■■■□□ 2.09
RNF213-206ENST00000558488 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.08■■■□□ 2.09
RNF213-206ENST00000558488 HNRNPUL2Q1KMD3 747 aaKnown RBP28.08■■■□□ 2.09
RNF213-206ENST00000558488 TROQ12816 1431 aaPredicted RBP28.07■■■□□ 2.08
RNF213-206ENST00000558488 LRRC9Q6ZRR7 1453 aa28.07■■■□□ 2.08
RNF213-206ENST00000558488 WDR7Q9Y4E6 1490 aa28.06■■■□□ 2.08
RNF213-206ENST00000558488 PLEKHD1A6NEE1 506 aa28.05■■■□□ 2.08
RNF213-206ENST00000558488 MAGI3Q5TCQ9 1506 aa28.04■■■□□ 2.08
RNF213-206ENST00000558488 MTUS2Q5JR59 1369 aa28.03■■■□□ 2.08
RNF213-206ENST00000558488 KIF14Q15058 1648 aa27.96■■■□□ 2.07
RNF213-206ENST00000558488 KANK4Q5T7N3 995 aaPredicted RBP27.94■■■□□ 2.06
RNF213-206ENST00000558488 SUPT6HQ7KZ85 1726 aaKnown RBP27.92■■■□□ 2.06
RNF213-206ENST00000558488 TEX14Q8IWB6 1497 aa27.9■■■□□ 2.06
RNF213-206ENST00000558488 NCOA2Q15596 1464 aa27.86■■■□□ 2.05
RNF213-206ENST00000558488 ABCA9Q8IUA7 1624 aa27.85■■■□□ 2.05
RNF213-206ENST00000558488 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.84■■■□□ 2.05
RNF213-206ENST00000558488 TTC37Q6PGP7 1564 aa27.79■■■□□ 2.04
RNF213-206ENST00000558488 FBXO41Q8TF61 875 aa27.79■■■□□ 2.04
RNF213-206ENST00000558488 KCNH8Q96L42 1107 aa27.79■■■□□ 2.04
RNF213-206ENST00000558488 ARAP3Q8WWN8 1544 aa27.76■■■□□ 2.03
RNF213-206ENST00000558488 ITSN2Q9NZM3 1697 aa27.75■■■□□ 2.03
RNF213-206ENST00000558488 CCNB3Q8WWL7 1395 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms