RNA–Protein interactions for RNA: ENST00000558488.1

RNF213-206, Transcript of ring finger protein 213, humanhuman

TSL 3

Gene RNF213, Length 526 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-206ENST00000558488 NISCHQ9Y2I1 1504 aa42.46■■■■■ 4.39
RNF213-206ENST00000558488 ABCC9O60706 1549 aa37.56■■■■□ 3.6
RNF213-206ENST00000558488 CCDC180Q9P1Z9 1646 aa37.52■■■■□ 3.6
RNF213-206ENST00000558488 DNAJC5BQ9UF47 199 aa36.08■■■■□ 3.37
RNF213-206ENST00000558488 ZCCHC6Q5VYS8 1495 aaKnown RBP35.55■■■■□ 3.28
RNF213-206ENST00000558488 DCAF1Q9Y4B6 1507 aa35.27■■■■□ 3.24
RNF213-206ENST00000558488 RB1CC1Q8TDY2 1594 aa35.26■■■■□ 3.24
RNF213-206ENST00000558488 MYO15BQ96JP2 1530 aa35.19■■■■□ 3.22
RNF213-206ENST00000558488 NACADO15069 1562 aa35.09■■■■□ 3.21
RNF213-206ENST00000558488 DCAF8L2P0C7V8 631 aa34.96■■■■□ 3.19
RNF213-206ENST00000558488 PABPN1Q86U42 306 aaKnown RBP eCLIP34.86■■■■□ 3.17
RNF213-206ENST00000558488 UNC13AQ9UPW8 1703 aa34.75■■■■□ 3.15
RNF213-206ENST00000558488 BICRAQ9NZM4 1560 aa34.48■■■■□ 3.11
RNF213-206ENST00000558488 SCRIBQ14160 1630 aa34.15■■■■□ 3.06
RNF213-206ENST00000558488 CC2D2AQ9P2K1 1620 aa33.9■■■■□ 3.02
RNF213-206ENST00000558488 CECR2Q9BXF3 1484 aa33.85■■■■□ 3.01
RNF213-206ENST00000558488 SHROOM4Q9ULL8 1493 aa33.76■■■■□ 3
RNF213-206ENST00000558488 EIF4G1Q04637 1599 aaKnown RBP33.59■■■□□ 2.97
RNF213-206ENST00000558488 DNAJC5Q9H3Z4 198 aa33.52■■■□□ 2.96
RNF213-206ENST00000558488 BAZ1AQ9NRL2 1556 aaPredicted RBP32.9■■■□□ 2.86
RNF213-206ENST00000558488 SMARCA4P51532 1647 aa32.8■■■□□ 2.84
RNF213-206ENST00000558488 MROH2BQ7Z745 1585 aa32.69■■■□□ 2.82
RNF213-206ENST00000558488 RSF1Q96T23 1441 aaPredicted RBP32.58■■■□□ 2.81
RNF213-206ENST00000558488 CUX2O14529 1486 aa32.55■■■□□ 2.8
RNF213-206ENST00000558488 PEG3Q9GZU2 1588 aa32.54■■■□□ 2.8
RNF213-206ENST00000558488 SMARCA2P51531 1590 aa32.49■■■□□ 2.79
RNF213-206ENST00000558488 ATAD2BQ9ULI0 1458 aa32.44■■■□□ 2.78
RNF213-206ENST00000558488 NCAPD3P42695 1498 aa32.35■■■□□ 2.77
RNF213-206ENST00000558488 ERCC6Q03468 1493 aa32.35■■■□□ 2.77
RNF213-206ENST00000558488 WIZO95785 1651 aa32.34■■■□□ 2.77
RNF213-206ENST00000558488 HMGXB3Q12766 1538 aa32.3■■■□□ 2.76
RNF213-206ENST00000558488 BAZ1BQ9UIG0 1483 aaKnown RBP32.21■■■□□ 2.75
RNF213-206ENST00000558488 TOP2AP11388 1531 aaKnown RBP32.14■■■□□ 2.74
RNF213-206ENST00000558488 NESP48681 1621 aa32.11■■■□□ 2.73
RNF213-206ENST00000558488 SUPT5HO00267 1087 aaKnown RBP32.11■■■□□ 2.73
RNF213-206ENST00000558488 THOC2Q8NI27 1593 aaKnown RBP31.9■■■□□ 2.7
RNF213-206ENST00000558488 TRIM41Q8WV44 630 aa31.75■■■□□ 2.67
RNF213-206ENST00000558488 KIF21AQ7Z4S6 1674 aa31.68■■■□□ 2.66
RNF213-206ENST00000558488 CCDC88BA6NC98 1476 aa31.68■■■□□ 2.66
RNF213-206ENST00000558488 LAMC3Q9Y6N6 1575 aa31.57■■■□□ 2.64
RNF213-206ENST00000558488 CADPSQ9ULU8 1353 aa31.42■■■□□ 2.62
RNF213-206ENST00000558488 CFTRP13569 1480 aa31.4■■■□□ 2.62
RNF213-206ENST00000558488 PDS5BQ9NTI5 1447 aa31.35■■■□□ 2.61
RNF213-206ENST00000558488 MRC2Q9UBG0 1479 aa31.22■■■□□ 2.59
RNF213-206ENST00000558488 PRDM2Q13029 1718 aa31.22■■■□□ 2.59
RNF213-206ENST00000558488 WDR62O43379 1518 aa31.2■■■□□ 2.59
RNF213-206ENST00000558488 FANCD2Q9BXW9 1451 aa31.04■■■□□ 2.56
RNF213-206ENST00000558488 CEP164Q9UPV0 1460 aa30.96■■■□□ 2.55
RNF213-206ENST00000558488 OSCARQ8IYS5 282 aa30.91■■■□□ 2.54
RNF213-206ENST00000558488 RIMBP3CA6NJZ7 1639 aa30.78■■■□□ 2.52
RNF213-206ENST00000558488 RIMBP3BA6NNM3 1639 aa30.78■■■□□ 2.52
RNF213-206ENST00000558488 RIMBP3Q9UFD9 1639 aa30.78■■■□□ 2.52
RNF213-206ENST00000558488 ABCC8Q09428 1581 aa30.74■■■□□ 2.51
RNF213-206ENST00000558488 URB2Q14146 1524 aaKnown RBP30.73■■■□□ 2.51
RNF213-206ENST00000558488 WRNQ14191 1432 aaPredicted RBP eCLIP30.72■■■□□ 2.51
RNF213-206ENST00000558488 DNMBPQ6XZF7 1577 aa30.69■■■□□ 2.5
RNF213-206ENST00000558488 CUX1P39880 1505 aa30.64■■■□□ 2.5
RNF213-206ENST00000558488 TOPBP1Q92547 1522 aa30.63■■■□□ 2.49
RNF213-206ENST00000558488 TOP2BQ02880 1626 aa30.6■■■□□ 2.49
RNF213-206ENST00000558488 BIVM-ERCC5R4GMW8 1640 aa30.6■■■□□ 2.49
RNF213-206ENST00000558488 SYNJ1O43426 1573 aa30.58■■■□□ 2.49
RNF213-206ENST00000558488 ARHGEF11O15085 1522 aa30.55■■■□□ 2.48
RNF213-206ENST00000558488 ZNF608Q9ULD9 1512 aaPredicted RBP30.51■■■□□ 2.47
RNF213-206ENST00000558488 CHIC1Q5VXU3 224 aa30.44■■■□□ 2.46
RNF213-206ENST00000558488 FGD5Q6ZNL6 1462 aa30.43■■■□□ 2.46
RNF213-206ENST00000558488 POLA1P09884 1462 aaPredicted RBP30.41■■■□□ 2.46
RNF213-206ENST00000558488 CYB5RLQ6IPT4 315 aa30.34■■■□□ 2.45
RNF213-206ENST00000558488 IFT140Q96RY7 1462 aa30.31■■■□□ 2.44
RNF213-206ENST00000558488 SOGA1O94964 1423 aa30.28■■■□□ 2.44
RNF213-206ENST00000558488 CHD1O14646 1710 aa30.25■■■□□ 2.43
RNF213-206ENST00000558488 EIF4G3O43432 1585 aaKnown RBP30.25■■■□□ 2.43
RNF213-206ENST00000558488 TARBP1Q13395 1621 aaKnown RBP30.25■■■□□ 2.43
RNF213-206ENST00000558488 ARAP1Q96P48 1450 aa30.24■■■□□ 2.43
RNF213-206ENST00000558488 ABCA10Q8WWZ4 1543 aa30.22■■■□□ 2.43
RNF213-206ENST00000558488 RAD54L2Q9Y4B4 1467 aa30.2■■■□□ 2.43
RNF213-206ENST00000558488 WDR97A6NE52 1622 aa30.19■■■□□ 2.42
RNF213-206ENST00000558488 TRHP20396 242 aaPredicted RBP30.19■■■□□ 2.42
RNF213-206ENST00000558488 AQRO60306 1485 aaKnown RBP eCLIP30.09■■■□□ 2.41
RNF213-206ENST00000558488 KIF27Q86VH2 1401 aa30.04■■■□□ 2.4
RNF213-206ENST00000558488 ABCA5Q8WWZ7 1642 aa30.04■■■□□ 2.4
RNF213-206ENST00000558488 EEA1Q15075 1411 aa29.99■■■□□ 2.39
RNF213-206ENST00000558488 TDRD9Q8NDG6 1382 aaKnown RBP29.97■■■□□ 2.39
RNF213-206ENST00000558488 GAPVD1Q14C86 1478 aa29.96■■■□□ 2.39
RNF213-206ENST00000558488 FBLN2P98095 1184 aa29.95■■■□□ 2.39
RNF213-206ENST00000558488 GRIN2BQ13224 1484 aa29.89■■■□□ 2.38
RNF213-206ENST00000558488 ERICH3Q5RHP9 1530 aa29.89■■■□□ 2.38
RNF213-206ENST00000558488 RUSC2Q8N2Y8 1516 aa29.86■■■□□ 2.37
RNF213-206ENST00000558488 PBRM1Q86U86 1689 aa29.85■■■□□ 2.37
RNF213-206ENST00000558488 AEBP2Q6ZN18 517 aaPredicted RBP29.82■■■□□ 2.36
RNF213-206ENST00000558488 CLASP1Q7Z460 1538 aa29.81■■■□□ 2.36
RNF213-206ENST00000558488 IGF1RP08069 1367 aa29.77■■■□□ 2.36
RNF213-206ENST00000558488 MAGI1Q96QZ7 1491 aaPredicted RBP29.77■■■□□ 2.36
RNF213-206ENST00000558488 CUL7Q14999 1698 aa29.75■■■□□ 2.35
RNF213-206ENST00000558488 SNAPC4Q5SXM2 1469 aa29.72■■■□□ 2.35
RNF213-206ENST00000558488 CSRNP3Q8WYN3 585 aa29.71■■■□□ 2.35
RNF213-206ENST00000558488 ADAMTS12P58397 1594 aa29.7■■■□□ 2.35
RNF213-206ENST00000558488 FHAD1B1AJZ9 1412 aa29.67■■■□□ 2.34
RNF213-206ENST00000558488 PRXQ9BXM0 1461 aa29.64■■■□□ 2.34
RNF213-206ENST00000558488 CARMIL1Q5VZK9 1371 aa29.63■■■□□ 2.33
RNF213-206ENST00000558488 FAM9AQ8IZU1 332 aaPredicted RBP29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms