RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 KIAA0586Q9BVV6 1533 aa20.64■□□□□ 0.9
SMAD3-205ENST00000558428 ARAP1Q96P48 1450 aa20.63■□□□□ 0.89
SMAD3-205ENST00000558428 CSRNP3Q8WYN3 585 aa20.63■□□□□ 0.89
SMAD3-205ENST00000558428 PRXQ9BXM0 1461 aa20.62■□□□□ 0.89
SMAD3-205ENST00000558428 JPH4Q96JJ6 628 aa20.62■□□□□ 0.89
SMAD3-205ENST00000558428 CYB5RLQ6IPT4 315 aa20.61■□□□□ 0.89
SMAD3-205ENST00000558428 FAM9AQ8IZU1 332 aaPredicted RBP20.61■□□□□ 0.89
SMAD3-205ENST00000558428 ERCC6L2Q5T890 1561 aa20.6■□□□□ 0.89
SMAD3-205ENST00000558428 PRG4Q92954 1404 aaPredicted RBP20.58■□□□□ 0.88
SMAD3-205ENST00000558428 IQGAP2Q13576 1575 aa20.55■□□□□ 0.88
SMAD3-205ENST00000558428 CTTNBP2Q8WZ74 1663 aa20.52■□□□□ 0.88
SMAD3-205ENST00000558428 KIF21BO75037 1637 aa20.45■□□□□ 0.87
SMAD3-205ENST00000558428 CARMIL2Q6F5E8 1435 aa20.44■□□□□ 0.86
SMAD3-205ENST00000558428 UGGT2Q9NYU1 1516 aa20.43■□□□□ 0.86
SMAD3-205ENST00000558428 DISP1Q96F81 1524 aa20.38■□□□□ 0.85
SMAD3-205ENST00000558428 TNIKQ9UKE5 1360 aa20.36■□□□□ 0.85
SMAD3-205ENST00000558428 KIAA0556O60303 1618 aa20.36■□□□□ 0.85
SMAD3-205ENST00000558428 EHMT2Q96KQ7 1210 aa20.36■□□□□ 0.85
SMAD3-205ENST00000558428 TTBK1Q5TCY1 1321 aaPredicted RBP20.35■□□□□ 0.85
SMAD3-205ENST00000558428 GOLGA3Q08378 1498 aa20.34■□□□□ 0.85
SMAD3-205ENST00000558428 PTPRGP23470 1445 aa20.34■□□□□ 0.85
SMAD3-205ENST00000558428 UBTFP17480 764 aaKnown RBP20.3■□□□□ 0.84
SMAD3-205ENST00000558428 RANGAP1P46060 587 aaPredicted RBP20.26■□□□□ 0.83
SMAD3-205ENST00000558428 ADCY10Q96PN6 1610 aa20.26■□□□□ 0.83
SMAD3-205ENST00000558428 SAMD9Q5K651 1589 aa20.24■□□□□ 0.83
SMAD3-205ENST00000558428 P3H3Q8IVL6 736 aa20.23■□□□□ 0.83
SMAD3-205ENST00000558428 UACAQ9BZF9 1416 aa20.2■□□□□ 0.82
SMAD3-205ENST00000558428 NPM1P06748 294 aaKnown RBP eCLIP20.2■□□□□ 0.82
SMAD3-205ENST00000558428 TRHP20396 242 aaPredicted RBP20.18■□□□□ 0.82
SMAD3-205ENST00000558428 UHRF1BP1LA0JNW5 1464 aa20.17■□□□□ 0.82
SMAD3-205ENST00000558428 ABCC2Q92887 1545 aa20.17■□□□□ 0.82
SMAD3-205ENST00000558428 EFCAB5A4FU69 1503 aa20.16■□□□□ 0.82
SMAD3-205ENST00000558428 PLB1Q6P1J6 1458 aa20.14■□□□□ 0.81
SMAD3-205ENST00000558428 FHOD3Q2V2M9 1422 aa20.13■□□□□ 0.81
SMAD3-205ENST00000558428 ABCA8O94911 1581 aa20.12■□□□□ 0.81
SMAD3-205ENST00000558428 MAPKBP1O60336 1514 aa20.11■□□□□ 0.81
SMAD3-205ENST00000558428 KDM5BQ9UGL1 1544 aa20.07■□□□□ 0.8
SMAD3-205ENST00000558428 ARHGAP35Q9NRY4 1499 aa20.06■□□□□ 0.8
SMAD3-205ENST00000558428 ZCCHC11Q5TAX3 1644 aaKnown RBP20.06■□□□□ 0.8
SMAD3-205ENST00000558428 RAPGEF6Q8TEU7 1601 aa20.05■□□□□ 0.8
SMAD3-205ENST00000558428 KIF13AQ9H1H9 1805 aa20.03■□□□□ 0.8
SMAD3-205ENST00000558428 ASXL2Q76L83 1435 aa20.02■□□□□ 0.79
SMAD3-205ENST00000558428 ABCC10Q5T3U5 1492 aa20.01■□□□□ 0.79
SMAD3-205ENST00000558428 ARID3CA6NKF2 412 aa19.99■□□□□ 0.79
SMAD3-205ENST00000558428 DIP2BQ9P265 1576 aa19.99■□□□□ 0.79
SMAD3-205ENST00000558428 LOC105371045A0A1W2PR82 267 aa19.98■□□□□ 0.79
SMAD3-205ENST00000558428 FAM69CQ0P6D2 419 aa19.98■□□□□ 0.79
SMAD3-205ENST00000558428 CLIP1P30622 1438 aa19.98■□□□□ 0.79
SMAD3-205ENST00000558428 FMN1Q68DA7 1419 aa19.97■□□□□ 0.79
SMAD3-205ENST00000558428 ATP10BO94823 1461 aa19.95■□□□□ 0.78
SMAD3-205ENST00000558428 NUP153P49790 1475 aaKnown RBP19.95■□□□□ 0.78
SMAD3-205ENST00000558428 WDR7Q9Y4E6 1490 aa19.92■□□□□ 0.78
SMAD3-205ENST00000558428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.91■□□□□ 0.78
SMAD3-205ENST00000558428 HNRNPUL2Q1KMD3 747 aaKnown RBP19.91■□□□□ 0.78
SMAD3-205ENST00000558428 CEP162Q5TB80 1403 aa19.91■□□□□ 0.78
SMAD3-205ENST00000558428 EPRSP07814 1512 aaKnown RBP19.9■□□□□ 0.78
SMAD3-205ENST00000558428 ATP1B4Q9UN42 357 aaPredicted RBP19.89■□□□□ 0.77
SMAD3-205ENST00000558428 HECW1Q76N89 1606 aa19.88■□□□□ 0.77
SMAD3-205ENST00000558428 GLI2P10070 1586 aa19.88■□□□□ 0.77
SMAD3-205ENST00000558428 TSPOAP1O95153 1857 aa19.88■□□□□ 0.77
SMAD3-205ENST00000558428 KCNH8Q96L42 1107 aa19.85■□□□□ 0.77
SMAD3-205ENST00000558428 PCF11O94913 1555 aaKnown RBP19.84■□□□□ 0.77
SMAD3-205ENST00000558428 CDK13Q14004 1512 aaKnown RBP19.83■□□□□ 0.77
SMAD3-205ENST00000558428 CASKIN1Q8WXD9 1431 aa19.82■□□□□ 0.76
SMAD3-205ENST00000558428 MAP3K4Q9Y6R4 1608 aa19.8■□□□□ 0.76
SMAD3-205ENST00000558428 PLEKHD1A6NEE1 506 aa19.8■□□□□ 0.76
SMAD3-205ENST00000558428 LRRIQ1Q96JM4 1722 aa19.79■□□□□ 0.76
SMAD3-205ENST00000558428 FYCO1Q9BQS8 1478 aa19.78■□□□□ 0.76
SMAD3-205ENST00000558428 PPRC1Q5VV67 1664 aaKnown RBP19.78■□□□□ 0.76
SMAD3-205ENST00000558428 CFAP43Q8NDM7 1665 aa19.77■□□□□ 0.76
SMAD3-205ENST00000558428 CCDC18Q5T9S5 1454 aa19.74■□□□□ 0.75
SMAD3-205ENST00000558428 CD109Q6YHK3 1445 aa19.74■□□□□ 0.75
SMAD3-205ENST00000558428 CDK11AQ9UQ88 783 aaPredicted RBP19.73■□□□□ 0.75
SMAD3-205ENST00000558428 ABCA9Q8IUA7 1624 aa19.73■□□□□ 0.75
SMAD3-205ENST00000558428 TEX14Q8IWB6 1497 aa19.71■□□□□ 0.75
SMAD3-205ENST00000558428 MAGI3Q5TCQ9 1506 aa19.68■□□□□ 0.74
SMAD3-205ENST00000558428 KDM6BO15054 1643 aa19.67■□□□□ 0.74
SMAD3-205ENST00000558428 TROQ12816 1431 aaPredicted RBP19.67■□□□□ 0.74
SMAD3-205ENST00000558428 VPS8Q8N3P4 1428 aa19.66■□□□□ 0.74
SMAD3-205ENST00000558428 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.66■□□□□ 0.74
SMAD3-205ENST00000558428 TTC37Q6PGP7 1564 aa19.64■□□□□ 0.73
SMAD3-205ENST00000558428 KIF14Q15058 1648 aa19.63■□□□□ 0.73
SMAD3-205ENST00000558428 MYO5CQ9NQX4 1742 aa19.56■□□□□ 0.72
SMAD3-205ENST00000558428 COL17A1Q9UMD9 1497 aaPredicted RBP19.56■□□□□ 0.72
SMAD3-205ENST00000558428 MTUS2Q5JR59 1369 aa19.56■□□□□ 0.72
SMAD3-205ENST00000558428 NEO1Q92859 1461 aa19.54■□□□□ 0.72
SMAD3-205ENST00000558428 PHLDB1Q86UU1 1377 aa19.54■□□□□ 0.72
SMAD3-205ENST00000558428 FANCAO15360 1455 aa19.54■□□□□ 0.72
SMAD3-205ENST00000558428 CFAP74Q9C0B2 1584 aa19.53■□□□□ 0.72
SMAD3-205ENST00000558428 PLCH2O75038 1416 aa19.53■□□□□ 0.72
SMAD3-205ENST00000558428 TIAM1Q13009 1591 aa19.53■□□□□ 0.72
SMAD3-205ENST00000558428 EHBP1L1Q8N3D4 1523 aa19.52■□□□□ 0.72
SMAD3-205ENST00000558428 ARAP3Q8WWN8 1544 aa19.51■□□□□ 0.71
SMAD3-205ENST00000558428 AKNAQ7Z591 1439 aa19.5■□□□□ 0.71
SMAD3-205ENST00000558428 ARHGAP5Q13017 1502 aa19.48■□□□□ 0.71
SMAD3-205ENST00000558428 CDC42BPBQ9Y5S2 1711 aa19.48■□□□□ 0.71
SMAD3-205ENST00000558428 PREX2Q70Z35 1606 aa19.47■□□□□ 0.71
SMAD3-205ENST00000558428 CDC42BPAQ5VT25 1732 aa19.47■□□□□ 0.71
SMAD3-205ENST00000558428 MAP3K1Q13233 1512 aa19.46■□□□□ 0.71
SMAD3-205ENST00000558428 EFCAB2Q5VUJ9 269 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms