RNA–Protein interactions for RNA: ENST00000558207.5

ACAN-203, Transcript of aggrecan, humanhuman

TSL 1 (best) BASIC

Gene ACAN, Length 4,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAN-203ENST00000558207 CUX1P39880 1505 aa16.21■□□□□ 0.18
ACAN-203ENST00000558207 HMGXB3Q12766 1538 aa16.19■□□□□ 0.18
ACAN-203ENST00000558207 SIN3AQ96ST3 1273 aa16.16■□□□□ 0.18
ACAN-203ENST00000558207 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.14■□□□□ 0.17
ACAN-203ENST00000558207 AQRO60306 1485 aaKnown RBP eCLIP16.14■□□□□ 0.17
ACAN-203ENST00000558207 CCNB3Q8WWL7 1395 aa16.14■□□□□ 0.17
ACAN-203ENST00000558207 PEG3Q9GZU2 1588 aa16.11■□□□□ 0.17
ACAN-203ENST00000558207 PLEKHD1A6NEE1 506 aa16.1■□□□□ 0.17
ACAN-203ENST00000558207 FHAD1B1AJZ9 1412 aa16.1■□□□□ 0.17
ACAN-203ENST00000558207 CFDP1Q9UEE9 299 aaPredicted RBP16.08■□□□□ 0.16
ACAN-203ENST00000558207 TONSLQ96HA7 1378 aa16.08■□□□□ 0.16
ACAN-203ENST00000558207 DDX10Q13206 875 aaKnown RBP16.08■□□□□ 0.16
ACAN-203ENST00000558207 TOP2BQ02880 1626 aa16.08■□□□□ 0.16
ACAN-203ENST00000558207 GAPVD1Q14C86 1478 aa16.07■□□□□ 0.16
ACAN-203ENST00000558207 POLA1P09884 1462 aaPredicted RBP16.04■□□□□ 0.16
ACAN-203ENST00000558207 TSPY4P0CV99 314 aa16.04■□□□□ 0.16
ACAN-203ENST00000558207 TSPY10P0CW01 314 aa16.04■□□□□ 0.16
ACAN-203ENST00000558207 TOPBP1Q92547 1522 aa16.03■□□□□ 0.16
ACAN-203ENST00000558207 KIF21BO75037 1637 aa16.03■□□□□ 0.16
ACAN-203ENST00000558207 ARAP1Q96P48 1450 aa16.03■□□□□ 0.16
ACAN-203ENST00000558207 MIER1Q8N108 512 aa16.02■□□□□ 0.16
ACAN-203ENST00000558207 SENP3Q9H4L4 574 aaPredicted RBP16.01■□□□□ 0.15
ACAN-203ENST00000558207 SLC4A1APQ9BWU0 796 aaKnown RBP16.01■□□□□ 0.15
ACAN-203ENST00000558207 KDM2AQ9Y2K7 1162 aa16.01■□□□□ 0.15
ACAN-203ENST00000558207 NPM1P06748 294 aaKnown RBP eCLIP16■□□□□ 0.15
ACAN-203ENST00000558207 FOXD1Q16676 465 aa16■□□□□ 0.15
ACAN-203ENST00000558207 JPH4Q96JJ6 628 aa16■□□□□ 0.15
ACAN-203ENST00000558207 PRXQ9BXM0 1461 aa15.99■□□□□ 0.15
ACAN-203ENST00000558207 GTF3C3Q9Y5Q9 886 aa15.96■□□□□ 0.15
ACAN-203ENST00000558207 FMN1Q68DA7 1419 aa15.95■□□□□ 0.14
ACAN-203ENST00000558207 ARHGAP35Q9NRY4 1499 aa15.95■□□□□ 0.14
ACAN-203ENST00000558207 RAB3GAP2Q9H2M9 1393 aa15.94■□□□□ 0.14
ACAN-203ENST00000558207 ANP32CO43423 234 aa15.94■□□□□ 0.14
ACAN-203ENST00000558207 NEFLP07196 543 aa15.93■□□□□ 0.14
ACAN-203ENST00000558207 CHGAP10645 457 aaKnown RBP15.93■□□□□ 0.14
ACAN-203ENST00000558207 PELP1Q8IZL8 1130 aaKnown RBP15.92■□□□□ 0.14
ACAN-203ENST00000558207 PLPPR3Q6T4P5 718 aa15.92■□□□□ 0.14
ACAN-203ENST00000558207 RGL3Q3MIN7 710 aa15.91■□□□□ 0.14
ACAN-203ENST00000558207 BCANQ96GW7 911 aa15.88■□□□□ 0.13
ACAN-203ENST00000558207 SETD5Q9C0A6 1442 aa15.87■□□□□ 0.13
ACAN-203ENST00000558207 URB2Q14146 1524 aaKnown RBP15.87■□□□□ 0.13
ACAN-203ENST00000558207 PHLDB1Q86UU1 1377 aa15.86■□□□□ 0.13
ACAN-203ENST00000558207 DNMBPQ6XZF7 1577 aa15.85■□□□□ 0.13
ACAN-203ENST00000558207 SENP3-EIF4A1A0A087X0R7 540 aa15.85■□□□□ 0.13
ACAN-203ENST00000558207 CARMIL2Q6F5E8 1435 aa15.84■□□□□ 0.13
ACAN-203ENST00000558207 ZNF644Q9H582 1327 aaPredicted RBP15.84■□□□□ 0.13
ACAN-203ENST00000558207 ERICH3Q5RHP9 1530 aa15.84■□□□□ 0.13
ACAN-203ENST00000558207 ACIN1Q9UKV3 1341 aaKnown RBP15.84■□□□□ 0.13
ACAN-203ENST00000558207 MRC2Q9UBG0 1479 aa15.83■□□□□ 0.12
ACAN-203ENST00000558207 HNRNPMP52272 730 aaKnown RBP eCLIP15.82■□□□□ 0.12
ACAN-203ENST00000558207 ZNF608Q9ULD9 1512 aaPredicted RBP15.78■□□□□ 0.12
ACAN-203ENST00000558207 DHX57Q6P158 1386 aaKnown RBP15.78■□□□□ 0.12
ACAN-203ENST00000558207 GRIN2BQ13224 1484 aa15.78■□□□□ 0.12
ACAN-203ENST00000558207 LAMC3Q9Y6N6 1575 aa15.77■□□□□ 0.12
ACAN-203ENST00000558207 ABCA10Q8WWZ4 1543 aa15.77■□□□□ 0.11
ACAN-203ENST00000558207 BIVM-ERCC5R4GMW8 1640 aa15.75■□□□□ 0.11
ACAN-203ENST00000558207 LRRC9Q6ZRR7 1453 aa15.74■□□□□ 0.11
ACAN-203ENST00000558207 SNAPC4Q5SXM2 1469 aa15.74■□□□□ 0.11
ACAN-203ENST00000558207 FAM9BQ8IZU0 186 aa15.73■□□□□ 0.11
ACAN-203ENST00000558207 EIF4G2P78344 907 aaKnown RBP eCLIP15.72■□□□□ 0.11
ACAN-203ENST00000558207 MPHOSPH9Q99550 1183 aa15.72■□□□□ 0.11
ACAN-203ENST00000558207 PTPRGP23470 1445 aa15.72■□□□□ 0.11
ACAN-203ENST00000558207 PKD2Q13563 968 aa15.72■□□□□ 0.11
ACAN-203ENST00000558207 SALL2Q9Y467 1007 aaPredicted RBP15.71■□□□□ 0.1
ACAN-203ENST00000558207 CLSPNQ9HAW4 1339 aa15.69■□□□□ 0.1
ACAN-203ENST00000558207 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
ACAN-203ENST00000558207 IFT140Q96RY7 1462 aa15.68■□□□□ 0.1
ACAN-203ENST00000558207 PRDM2Q13029 1718 aa15.67■□□□□ 0.1
ACAN-203ENST00000558207 CASKIN1Q8WXD9 1431 aa15.67■□□□□ 0.1
ACAN-203ENST00000558207 HNRNPUQ00839 825 aaKnown RBP eCLIP15.67■□□□□ 0.1
ACAN-203ENST00000558207 CCDC18Q5T9S5 1454 aa15.66■□□□□ 0.1
ACAN-203ENST00000558207 FGD6Q6ZV73 1430 aa15.66■□□□□ 0.1
ACAN-203ENST00000558207 DCAF11Q8TEB1 546 aa15.65■□□□□ 0.1
ACAN-203ENST00000558207 STAG3Q9UJ98 1225 aa15.65■□□□□ 0.1
ACAN-203ENST00000558207 NUP155O75694 1391 aa15.63■□□□□ 0.09
ACAN-203ENST00000558207 NCOA2Q15596 1464 aa15.63■□□□□ 0.09
ACAN-203ENST00000558207 L3MBTL2Q969R5 705 aa15.62■□□□□ 0.09
ACAN-203ENST00000558207 CYB5RLQ6IPT4 315 aa15.61■□□□□ 0.09
ACAN-203ENST00000558207 CARD11Q9BXL7 1154 aa15.61■□□□□ 0.09
ACAN-203ENST00000558207 PPP1R15AO75807 674 aaPredicted RBP15.61■□□□□ 0.09
ACAN-203ENST00000558207 ESF1Q9H501 851 aaKnown RBP15.61■□□□□ 0.09
ACAN-203ENST00000558207 CDK13Q14004 1512 aaKnown RBP15.6■□□□□ 0.09
ACAN-203ENST00000558207 GGT6Q6P531 493 aa15.6■□□□□ 0.09
ACAN-203ENST00000558207 MYOM3Q5VTT5 1437 aa15.59■□□□□ 0.09
ACAN-203ENST00000558207 PRG4Q92954 1404 aaPredicted RBP15.59■□□□□ 0.09
ACAN-203ENST00000558207 MRS2Q9HD23 443 aa15.59■□□□□ 0.09
ACAN-203ENST00000558207 MLECQ14165 292 aa15.59■□□□□ 0.09
ACAN-203ENST00000558207 PCF11O94913 1555 aaKnown RBP15.58■□□□□ 0.09
ACAN-203ENST00000558207 HSPA5P11021 654 aaKnown RBP15.58■□□□□ 0.09
ACAN-203ENST00000558207 EFCAB2Q5VUJ9 269 aa15.58■□□□□ 0.09
ACAN-203ENST00000558207 TIAM1Q13009 1591 aa15.58■□□□□ 0.08
ACAN-203ENST00000558207 FYCO1Q9BQS8 1478 aa15.58■□□□□ 0.08
ACAN-203ENST00000558207 RRBP1Q9P2E9 1410 aaKnown RBP15.57■□□□□ 0.08
ACAN-203ENST00000558207 IRX6P78412 446 aaPredicted RBP15.55■□□□□ 0.08
ACAN-203ENST00000558207 ANKRD30AQ9BXX3 1397 aa15.55■□□□□ 0.08
ACAN-203ENST00000558207 OSCARQ8IYS5 282 aa15.54■□□□□ 0.08
ACAN-203ENST00000558207 KIF21AQ7Z4S6 1674 aa15.54■□□□□ 0.08
ACAN-203ENST00000558207 FKBP8Q14318 412 aa15.53■□□□□ 0.08
ACAN-203ENST00000558207 PLB1Q6P1J6 1458 aa15.53■□□□□ 0.08
ACAN-203ENST00000558207 KIF3BO15066 747 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms