RNA–Protein interactions for RNA: ENST00000558207.5

ACAN-203, Transcript of aggrecan, humanhuman

TSL 1 (best) BASIC

Gene ACAN, Length 4,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAN-203ENST00000558207 NISCHQ9Y2I1 1504 aa22.3■■□□□ 1.16
ACAN-203ENST00000558207 DCAF8L2P0C7V8 631 aa20.98■□□□□ 0.95
ACAN-203ENST00000558207 SHROOM4Q9ULL8 1493 aa20.3■□□□□ 0.84
ACAN-203ENST00000558207 SUPT5HO00267 1087 aaKnown RBP20.01■□□□□ 0.79
ACAN-203ENST00000558207 EHMT2Q96KQ7 1210 aa19.07■□□□□ 0.64
ACAN-203ENST00000558207 ABCC9O60706 1549 aa18.97■□□□□ 0.63
ACAN-203ENST00000558207 FAM9AQ8IZU1 332 aaPredicted RBP18.76■□□□□ 0.59
ACAN-203ENST00000558207 ZCCHC6Q5VYS8 1495 aaKnown RBP18.57■□□□□ 0.56
ACAN-203ENST00000558207 PABPN1Q86U42 306 aaKnown RBP eCLIP18.53■□□□□ 0.56
ACAN-203ENST00000558207 CCDC180Q9P1Z9 1646 aa18.52■□□□□ 0.56
ACAN-203ENST00000558207 TRIM41Q8WV44 630 aa18.43■□□□□ 0.54
ACAN-203ENST00000558207 CHIC1Q5VXU3 224 aa18.37■□□□□ 0.53
ACAN-203ENST00000558207 TTBK1Q5TCY1 1321 aaPredicted RBP18.28■□□□□ 0.52
ACAN-203ENST00000558207 SCRIBQ14160 1630 aa18.28■□□□□ 0.52
ACAN-203ENST00000558207 LOC105371045A0A1W2PR82 267 aa18.25■□□□□ 0.51
ACAN-203ENST00000558207 RANGAP1P46060 587 aaPredicted RBP18.22■□□□□ 0.51
ACAN-203ENST00000558207 PCGF6Q9BYE7 350 aa18.17■□□□□ 0.5
ACAN-203ENST00000558207 PPARGC1BQ86YN6 1023 aaKnown RBP18.07■□□□□ 0.48
ACAN-203ENST00000558207 UBTFP17480 764 aaKnown RBP17.94■□□□□ 0.46
ACAN-203ENST00000558207 APLP2Q06481 763 aa17.74■□□□□ 0.43
ACAN-203ENST00000558207 RSF1Q96T23 1441 aaPredicted RBP17.73■□□□□ 0.43
ACAN-203ENST00000558207 RB1CC1Q8TDY2 1594 aa17.72■□□□□ 0.43
ACAN-203ENST00000558207 CECR2Q9BXF3 1484 aa17.72■□□□□ 0.43
ACAN-203ENST00000558207 DCAF1Q9Y4B6 1507 aa17.71■□□□□ 0.43
ACAN-203ENST00000558207 NACADO15069 1562 aa17.69■□□□□ 0.42
ACAN-203ENST00000558207 ATP1B4Q9UN42 357 aaPredicted RBP17.67■□□□□ 0.42
ACAN-203ENST00000558207 MYO15BQ96JP2 1530 aa17.59■□□□□ 0.41
ACAN-203ENST00000558207 TRIM26Q12899 539 aaPredicted RBP17.45■□□□□ 0.38
ACAN-203ENST00000558207 MROH2BQ7Z745 1585 aa17.44■□□□□ 0.38
ACAN-203ENST00000558207 CCER1Q8TC90 406 aaPredicted RBP17.43■□□□□ 0.38
ACAN-203ENST00000558207 ITGAEP38570 1179 aa17.32■□□□□ 0.36
ACAN-203ENST00000558207 CSRNP3Q8WYN3 585 aa17.31■□□□□ 0.36
ACAN-203ENST00000558207 HNRNPUL2Q1KMD3 747 aaKnown RBP17.3■□□□□ 0.36
ACAN-203ENST00000558207 BAZ1AQ9NRL2 1556 aaPredicted RBP17.26■□□□□ 0.35
ACAN-203ENST00000558207 HRCP23327 699 aa17.25■□□□□ 0.35
ACAN-203ENST00000558207 WIZO95785 1651 aa17.24■□□□□ 0.35
ACAN-203ENST00000558207 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.22■□□□□ 0.35
ACAN-203ENST00000558207 P3H3Q8IVL6 736 aa17.18■□□□□ 0.34
ACAN-203ENST00000558207 BAZ1BQ9UIG0 1483 aaKnown RBP17.18■□□□□ 0.34
ACAN-203ENST00000558207 CCDC88BA6NC98 1476 aa17.11■□□□□ 0.33
ACAN-203ENST00000558207 ABCC8Q09428 1581 aa17.07■□□□□ 0.32
ACAN-203ENST00000558207 FBLN2P98095 1184 aa17.05■□□□□ 0.32
ACAN-203ENST00000558207 ARID3CA6NKF2 412 aa17.04■□□□□ 0.32
ACAN-203ENST00000558207 ZEB1P37275 1124 aaPredicted RBP17.03■□□□□ 0.32
ACAN-203ENST00000558207 WRNQ14191 1432 aaPredicted RBP eCLIP17.02■□□□□ 0.32
ACAN-203ENST00000558207 SOGA1O94964 1423 aa17■□□□□ 0.31
ACAN-203ENST00000558207 SMARCA4P51532 1647 aa16.95■□□□□ 0.3
ACAN-203ENST00000558207 FAM50AQ14320 339 aaKnown RBP16.91■□□□□ 0.3
ACAN-203ENST00000558207 ATAD2BQ9ULI0 1458 aa16.89■□□□□ 0.29
ACAN-203ENST00000558207 TOP2AP11388 1531 aaKnown RBP16.88■□□□□ 0.29
ACAN-203ENST00000558207 CEP162Q5TB80 1403 aa16.81■□□□□ 0.28
ACAN-203ENST00000558207 SMARCA2P51531 1590 aa16.79■□□□□ 0.28
ACAN-203ENST00000558207 YTHDC1Q96MU7 727 aaKnown RBP16.78■□□□□ 0.28
ACAN-203ENST00000558207 RUSC2Q8N2Y8 1516 aa16.77■□□□□ 0.28
ACAN-203ENST00000558207 CLIP1P30622 1438 aa16.76■□□□□ 0.27
ACAN-203ENST00000558207 GOLGA3Q08378 1498 aa16.71■□□□□ 0.27
ACAN-203ENST00000558207 BICRAQ9NZM4 1560 aa16.69■□□□□ 0.26
ACAN-203ENST00000558207 NEUROD1Q13562 356 aa16.66■□□□□ 0.26
ACAN-203ENST00000558207 EEA1Q15075 1411 aa16.65■□□□□ 0.26
ACAN-203ENST00000558207 KIF27Q86VH2 1401 aa16.65■□□□□ 0.26
ACAN-203ENST00000558207 TNIKQ9UKE5 1360 aa16.65■□□□□ 0.26
ACAN-203ENST00000558207 CUX2O14529 1486 aa16.63■□□□□ 0.25
ACAN-203ENST00000558207 DNAJC5BQ9UF47 199 aa16.63■□□□□ 0.25
ACAN-203ENST00000558207 MYT1LQ9UL68 1186 aa16.63■□□□□ 0.25
ACAN-203ENST00000558207 EIF4G1Q04637 1599 aaKnown RBP16.61■□□□□ 0.25
ACAN-203ENST00000558207 CEP164Q9UPV0 1460 aa16.6■□□□□ 0.25
ACAN-203ENST00000558207 CADPSQ9ULU8 1353 aa16.58■□□□□ 0.25
ACAN-203ENST00000558207 CNGB1Q14028 1251 aaPredicted RBP16.57■□□□□ 0.24
ACAN-203ENST00000558207 TRIM52Q96A61 297 aa16.57■□□□□ 0.24
ACAN-203ENST00000558207 TDRD9Q8NDG6 1382 aaKnown RBP16.57■□□□□ 0.24
ACAN-203ENST00000558207 UNC13AQ9UPW8 1703 aa16.57■□□□□ 0.24
ACAN-203ENST00000558207 ZNF777Q9ULD5 760 aaPredicted RBP16.55■□□□□ 0.24
ACAN-203ENST00000558207 CHMP7Q8WUX9 453 aaPredicted RBP16.54■□□□□ 0.24
ACAN-203ENST00000558207 CARMIL1Q5VZK9 1371 aa16.51■□□□□ 0.23
ACAN-203ENST00000558207 DIEXFQ68CQ4 756 aaKnown RBP16.51■□□□□ 0.23
ACAN-203ENST00000558207 POLR3GLQ9BT43 218 aa16.5■□□□□ 0.23
ACAN-203ENST00000558207 CHIC2Q9UKJ5 165 aa16.5■□□□□ 0.23
ACAN-203ENST00000558207 RAPGEF2Q9Y4G8 1499 aa16.5■□□□□ 0.23
ACAN-203ENST00000558207 NCAPD3P42695 1498 aa16.48■□□□□ 0.23
ACAN-203ENST00000558207 ERCC6Q03468 1493 aa16.48■□□□□ 0.23
ACAN-203ENST00000558207 KANK4Q5T7N3 995 aaPredicted RBP16.46■□□□□ 0.23
ACAN-203ENST00000558207 NESP48681 1621 aa16.43■□□□□ 0.22
ACAN-203ENST00000558207 CENPBP07199 599 aaPredicted RBP16.42■□□□□ 0.22
ACAN-203ENST00000558207 FANCD2Q9BXW9 1451 aa16.41■□□□□ 0.22
ACAN-203ENST00000558207 MTUS2Q5JR59 1369 aa16.39■□□□□ 0.21
ACAN-203ENST00000558207 SYNJ1O43426 1573 aa16.38■□□□□ 0.21
ACAN-203ENST00000558207 ZNF326Q5BKZ1 582 aaKnown RBP16.37■□□□□ 0.21
ACAN-203ENST00000558207 PDS5BQ9NTI5 1447 aa16.37■□□□□ 0.21
ACAN-203ENST00000558207 CC2D2AQ9P2K1 1620 aa16.36■□□□□ 0.21
ACAN-203ENST00000558207 RAD54L2Q9Y4B4 1467 aa16.36■□□□□ 0.21
ACAN-203ENST00000558207 VPS8Q8N3P4 1428 aa16.32■□□□□ 0.2
ACAN-203ENST00000558207 RRP7BPQ9NSQ0 103 aa16.31■□□□□ 0.2
ACAN-203ENST00000558207 ZNF316A6NFI3 1004 aaPredicted RBP16.31■□□□□ 0.2
ACAN-203ENST00000558207 FGD5Q6ZNL6 1462 aa16.3■□□□□ 0.2
ACAN-203ENST00000558207 CDK11AQ9UQ88 783 aaPredicted RBP16.29■□□□□ 0.2
ACAN-203ENST00000558207 HIRIP3Q9BW71 556 aaPredicted RBP16.27■□□□□ 0.2
ACAN-203ENST00000558207 CFTRP13569 1480 aa16.27■□□□□ 0.19
ACAN-203ENST00000558207 IGF1RP08069 1367 aa16.25■□□□□ 0.19
ACAN-203ENST00000558207 KCNH8Q96L42 1107 aa16.25■□□□□ 0.19
ACAN-203ENST00000558207 FHOD3Q2V2M9 1422 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms