RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 ARAP1Q96P48 1450 aa14.95□□□□□ -0.02
SPG11-207ENST00000558138 JPH4Q96JJ6 628 aa14.93□□□□□ -0.02
SPG11-207ENST00000558138 EEA1Q15075 1411 aa14.92□□□□□ -0.02
SPG11-207ENST00000558138 KIAA0586Q9BVV6 1533 aa14.92□□□□□ -0.02
SPG11-207ENST00000558138 PRG4Q92954 1404 aaPredicted RBP14.92□□□□□ -0.02
SPG11-207ENST00000558138 CSRNP3Q8WYN3 585 aa14.91□□□□□ -0.02
SPG11-207ENST00000558138 SHROOM2Q13796 1616 aa14.91□□□□□ -0.02
SPG11-207ENST00000558138 ERCC6L2Q5T890 1561 aa14.9□□□□□ -0.02
SPG11-207ENST00000558138 IQGAP2Q13576 1575 aa14.87□□□□□ -0.03
SPG11-207ENST00000558138 TTBK1Q5TCY1 1321 aaPredicted RBP14.87□□□□□ -0.03
SPG11-207ENST00000558138 PRXQ9BXM0 1461 aa14.85□□□□□ -0.03
SPG11-207ENST00000558138 CTTNBP2Q8WZ74 1663 aa14.84□□□□□ -0.03
SPG11-207ENST00000558138 EHMT2Q96KQ7 1210 aa14.84□□□□□ -0.03
SPG11-207ENST00000558138 CARMIL2Q6F5E8 1435 aa14.83□□□□□ -0.04
SPG11-207ENST00000558138 TRHP20396 242 aaPredicted RBP14.77□□□□□ -0.05
SPG11-207ENST00000558138 RANGAP1P46060 587 aaPredicted RBP14.77□□□□□ -0.05
SPG11-207ENST00000558138 KIF21BO75037 1637 aa14.75□□□□□ -0.05
SPG11-207ENST00000558138 PTPRGP23470 1445 aa14.75□□□□□ -0.05
SPG11-207ENST00000558138 TNIKQ9UKE5 1360 aa14.74□□□□□ -0.05
SPG11-207ENST00000558138 NPM1P06748 294 aaKnown RBP eCLIP14.74□□□□□ -0.05
SPG11-207ENST00000558138 UBTFP17480 764 aaKnown RBP14.74□□□□□ -0.05
SPG11-207ENST00000558138 UGGT2Q9NYU1 1516 aa14.74□□□□□ -0.05
SPG11-207ENST00000558138 GOLGA3Q08378 1498 aa14.73□□□□□ -0.05
SPG11-207ENST00000558138 KIAA0556O60303 1618 aa14.73□□□□□ -0.05
SPG11-207ENST00000558138 DISP1Q96F81 1524 aa14.71□□□□□ -0.06
SPG11-207ENST00000558138 P3H3Q8IVL6 736 aa14.69□□□□□ -0.06
SPG11-207ENST00000558138 ADCY10Q96PN6 1610 aa14.66□□□□□ -0.06
SPG11-207ENST00000558138 UACAQ9BZF9 1416 aa14.63□□□□□ -0.07
SPG11-207ENST00000558138 ABCC2Q92887 1545 aa14.6□□□□□ -0.07
SPG11-207ENST00000558138 SAMD9Q5K651 1589 aa14.6□□□□□ -0.07
SPG11-207ENST00000558138 FHOD3Q2V2M9 1422 aa14.58□□□□□ -0.08
SPG11-207ENST00000558138 UHRF1BP1LA0JNW5 1464 aa14.57□□□□□ -0.08
SPG11-207ENST00000558138 PLB1Q6P1J6 1458 aa14.57□□□□□ -0.08
SPG11-207ENST00000558138 EFCAB5A4FU69 1503 aa14.57□□□□□ -0.08
SPG11-207ENST00000558138 ARID3CA6NKF2 412 aa14.56□□□□□ -0.08
SPG11-207ENST00000558138 MAPKBP1O60336 1514 aa14.55□□□□□ -0.08
SPG11-207ENST00000558138 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.54□□□□□ -0.08
SPG11-207ENST00000558138 FAM69CQ0P6D2 419 aa14.54□□□□□ -0.08
SPG11-207ENST00000558138 HNRNPUL2Q1KMD3 747 aaKnown RBP14.54□□□□□ -0.08
SPG11-207ENST00000558138 ZCCHC11Q5TAX3 1644 aaKnown RBP14.53□□□□□ -0.08
SPG11-207ENST00000558138 ABCA8O94911 1581 aa14.52□□□□□ -0.08
SPG11-207ENST00000558138 ATP1B4Q9UN42 357 aaPredicted RBP14.52□□□□□ -0.09
SPG11-207ENST00000558138 RAPGEF6Q8TEU7 1601 aa14.51□□□□□ -0.09
SPG11-207ENST00000558138 ASXL2Q76L83 1435 aa14.5□□□□□ -0.09
SPG11-207ENST00000558138 KDM5BQ9UGL1 1544 aa14.5□□□□□ -0.09
SPG11-207ENST00000558138 ABCC10Q5T3U5 1492 aa14.49□□□□□ -0.09
SPG11-207ENST00000558138 KIF13AQ9H1H9 1805 aa14.48□□□□□ -0.09
SPG11-207ENST00000558138 DIP2BQ9P265 1576 aa14.47□□□□□ -0.09
SPG11-207ENST00000558138 ARHGAP35Q9NRY4 1499 aa14.47□□□□□ -0.09
SPG11-207ENST00000558138 FMN1Q68DA7 1419 aa14.46□□□□□ -0.09
SPG11-207ENST00000558138 CLIP1P30622 1438 aa14.44□□□□□ -0.1
SPG11-207ENST00000558138 KCNH8Q96L42 1107 aa14.44□□□□□ -0.1
SPG11-207ENST00000558138 TSPOAP1O95153 1857 aa14.44□□□□□ -0.1
SPG11-207ENST00000558138 WDR7Q9Y4E6 1490 aa14.44□□□□□ -0.1
SPG11-207ENST00000558138 LOC105371045A0A1W2PR82 267 aa14.41□□□□□ -0.1
SPG11-207ENST00000558138 ATP10BO94823 1461 aa14.41□□□□□ -0.1
SPG11-207ENST00000558138 NUP153P49790 1475 aaKnown RBP14.41□□□□□ -0.1
SPG11-207ENST00000558138 HECW1Q76N89 1606 aa14.41□□□□□ -0.1
SPG11-207ENST00000558138 EPRSP07814 1512 aaKnown RBP14.41□□□□□ -0.1
SPG11-207ENST00000558138 PLEKHD1A6NEE1 506 aa14.37□□□□□ -0.11
SPG11-207ENST00000558138 CEP162Q5TB80 1403 aa14.37□□□□□ -0.11
SPG11-207ENST00000558138 GLI2P10070 1586 aa14.37□□□□□ -0.11
SPG11-207ENST00000558138 CDK13Q14004 1512 aaKnown RBP14.36□□□□□ -0.11
SPG11-207ENST00000558138 PCF11O94913 1555 aaKnown RBP14.34□□□□□ -0.11
SPG11-207ENST00000558138 CDK11AQ9UQ88 783 aaPredicted RBP14.34□□□□□ -0.11
SPG11-207ENST00000558138 TEX14Q8IWB6 1497 aa14.32□□□□□ -0.12
SPG11-207ENST00000558138 MAP3K4Q9Y6R4 1608 aa14.32□□□□□ -0.12
SPG11-207ENST00000558138 CD109Q6YHK3 1445 aa14.32□□□□□ -0.12
SPG11-207ENST00000558138 CFAP43Q8NDM7 1665 aa14.31□□□□□ -0.12
SPG11-207ENST00000558138 CASKIN1Q8WXD9 1431 aa14.31□□□□□ -0.12
SPG11-207ENST00000558138 KDM6BO15054 1643 aa14.3□□□□□ -0.12
SPG11-207ENST00000558138 FYCO1Q9BQS8 1478 aa14.3□□□□□ -0.12
SPG11-207ENST00000558138 CCDC18Q5T9S5 1454 aa14.29□□□□□ -0.12
SPG11-207ENST00000558138 PPRC1Q5VV67 1664 aaKnown RBP14.27□□□□□ -0.12
SPG11-207ENST00000558138 ABCA9Q8IUA7 1624 aa14.26□□□□□ -0.13
SPG11-207ENST00000558138 LRRIQ1Q96JM4 1722 aa14.25□□□□□ -0.13
SPG11-207ENST00000558138 MAGI3Q5TCQ9 1506 aa14.24□□□□□ -0.13
SPG11-207ENST00000558138 KIF14Q15058 1648 aa14.23□□□□□ -0.13
SPG11-207ENST00000558138 TROQ12816 1431 aaPredicted RBP14.22□□□□□ -0.13
SPG11-207ENST00000558138 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.21□□□□□ -0.13
SPG11-207ENST00000558138 TTC37Q6PGP7 1564 aa14.21□□□□□ -0.14
SPG11-207ENST00000558138 VPS8Q8N3P4 1428 aa14.19□□□□□ -0.14
SPG11-207ENST00000558138 MTUS2Q5JR59 1369 aa14.19□□□□□ -0.14
SPG11-207ENST00000558138 CFAP74Q9C0B2 1584 aa14.17□□□□□ -0.14
SPG11-207ENST00000558138 APLP2Q06481 763 aa14.17□□□□□ -0.14
SPG11-207ENST00000558138 MYO5CQ9NQX4 1742 aa14.17□□□□□ -0.14
SPG11-207ENST00000558138 FANCAO15360 1455 aa14.16□□□□□ -0.14
SPG11-207ENST00000558138 NEO1Q92859 1461 aa14.15□□□□□ -0.14
SPG11-207ENST00000558138 ARHGAP5Q13017 1502 aa14.15□□□□□ -0.14
SPG11-207ENST00000558138 PHLDB1Q86UU1 1377 aa14.14□□□□□ -0.15
SPG11-207ENST00000558138 PLCH2O75038 1416 aa14.13□□□□□ -0.15
SPG11-207ENST00000558138 EHBP1L1Q8N3D4 1523 aa14.12□□□□□ -0.15
SPG11-207ENST00000558138 EFCAB2Q5VUJ9 269 aa14.12□□□□□ -0.15
SPG11-207ENST00000558138 AKNAQ7Z591 1439 aa14.12□□□□□ -0.15
SPG11-207ENST00000558138 COL17A1Q9UMD9 1497 aaPredicted RBP14.12□□□□□ -0.15
SPG11-207ENST00000558138 ARAP3Q8WWN8 1544 aa14.1□□□□□ -0.15
SPG11-207ENST00000558138 TIAM1Q13009 1591 aa14.1□□□□□ -0.15
SPG11-207ENST00000558138 MYT1LQ9UL68 1186 aa14.1□□□□□ -0.15
SPG11-207ENST00000558138 ZNF777Q9ULD5 760 aaPredicted RBP14.1□□□□□ -0.15
SPG11-207ENST00000558138 ADGRL1O94910 1474 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms