RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 CYB5RLQ6IPT4 315 aa15.26■□□□□ 0.03
SNRPA1-206ENST00000558059 GRIN2AQ12879 1464 aa15.26■□□□□ 0.03
SNRPA1-206ENST00000558059 FHAD1B1AJZ9 1412 aa15.26■□□□□ 0.03
SNRPA1-206ENST00000558059 ARAP1Q96P48 1450 aa15.25■□□□□ 0.03
SNRPA1-206ENST00000558059 NUP160Q12769 1436 aa15.21■□□□□ 0.03
SNRPA1-206ENST00000558059 CEP170Q5SW79 1584 aa15.19■□□□□ 0.02
SNRPA1-206ENST00000558059 KIF27Q86VH2 1401 aa15.17■□□□□ 0.02
SNRPA1-206ENST00000558059 IGF1RP08069 1367 aa15.17■□□□□ 0.02
SNRPA1-206ENST00000558059 SCAF1Q9H7N4 1312 aaKnown RBP15.13■□□□□ 0.01
SNRPA1-206ENST00000558059 ERCC6L2Q5T890 1561 aa15.11■□□□□ 0.01
SNRPA1-206ENST00000558059 SHROOM2Q13796 1616 aa15.11■□□□□ 0.01
SNRPA1-206ENST00000558059 CUL7Q14999 1698 aa15.09■□□□□ 0.01
SNRPA1-206ENST00000558059 JPH4Q96JJ6 628 aa15.07■□□□□ 0
SNRPA1-206ENST00000558059 CARMIL1Q5VZK9 1371 aa15.06■□□□□ 0
SNRPA1-206ENST00000558059 RUSC2Q8N2Y8 1516 aa15.05■□□□□ -0
SNRPA1-206ENST00000558059 PRG4Q92954 1404 aaPredicted RBP15.03■□□□□ -0
SNRPA1-206ENST00000558059 KIAA0586Q9BVV6 1533 aa15.02□□□□□ -0.01
SNRPA1-206ENST00000558059 TRHP20396 242 aaPredicted RBP14.98□□□□□ -0.01
SNRPA1-206ENST00000558059 RAPGEF2Q9Y4G8 1499 aa14.94□□□□□ -0.02
SNRPA1-206ENST00000558059 IQGAP2Q13576 1575 aa14.9□□□□□ -0.02
SNRPA1-206ENST00000558059 PRXQ9BXM0 1461 aa14.86□□□□□ -0.03
SNRPA1-206ENST00000558059 CARMIL2Q6F5E8 1435 aa14.84□□□□□ -0.03
SNRPA1-206ENST00000558059 ADCY10Q96PN6 1610 aa14.84□□□□□ -0.03
SNRPA1-206ENST00000558059 PTPRGP23470 1445 aa14.83□□□□□ -0.03
SNRPA1-206ENST00000558059 TNIKQ9UKE5 1360 aa14.83□□□□□ -0.04
SNRPA1-206ENST00000558059 DISP1Q96F81 1524 aa14.82□□□□□ -0.04
SNRPA1-206ENST00000558059 UGGT2Q9NYU1 1516 aa14.82□□□□□ -0.04
SNRPA1-206ENST00000558059 CSRNP3Q8WYN3 585 aa14.81□□□□□ -0.04
SNRPA1-206ENST00000558059 CTTNBP2Q8WZ74 1663 aa14.8□□□□□ -0.04
SNRPA1-206ENST00000558059 NPM1P06748 294 aaKnown RBP eCLIP14.79□□□□□ -0.04
SNRPA1-206ENST00000558059 TTBK1Q5TCY1 1321 aaPredicted RBP14.79□□□□□ -0.04
SNRPA1-206ENST00000558059 KIF13AQ9H1H9 1805 aa14.78□□□□□ -0.04
SNRPA1-206ENST00000558059 MAPKBP1O60336 1514 aa14.76□□□□□ -0.05
SNRPA1-206ENST00000558059 EEA1Q15075 1411 aa14.75□□□□□ -0.05
SNRPA1-206ENST00000558059 KIAA0556O60303 1618 aa14.75□□□□□ -0.05
SNRPA1-206ENST00000558059 UHRF1BP1LA0JNW5 1464 aa14.73□□□□□ -0.05
SNRPA1-206ENST00000558059 ABCC10Q5T3U5 1492 aa14.73□□□□□ -0.05
SNRPA1-206ENST00000558059 CACNB1Q02641 598 aaPredicted RBP14.72□□□□□ -0.05
SNRPA1-206ENST00000558059 UACAQ9BZF9 1416 aa14.72□□□□□ -0.05
SNRPA1-206ENST00000558059 ABCC2Q92887 1545 aa14.71□□□□□ -0.05
SNRPA1-206ENST00000558059 FAM69CQ0P6D2 419 aa14.71□□□□□ -0.05
SNRPA1-206ENST00000558059 FAM9AQ8IZU1 332 aaPredicted RBP14.71□□□□□ -0.05
SNRPA1-206ENST00000558059 GOLGA3Q08378 1498 aa14.7□□□□□ -0.06
SNRPA1-206ENST00000558059 PPP4R3CPQ6ZMV5 832 aa14.7□□□□□ -0.06
SNRPA1-206ENST00000558059 DIP2BQ9P265 1576 aa14.69□□□□□ -0.06
SNRPA1-206ENST00000558059 HOXD11P31277 338 aaPredicted RBP14.67□□□□□ -0.06
SNRPA1-206ENST00000558059 KDM5BQ9UGL1 1544 aa14.66□□□□□ -0.06
SNRPA1-206ENST00000558059 ASXL2Q76L83 1435 aa14.65□□□□□ -0.06
SNRPA1-206ENST00000558059 PLB1Q6P1J6 1458 aa14.64□□□□□ -0.07
SNRPA1-206ENST00000558059 KIF21BO75037 1637 aa14.63□□□□□ -0.07
SNRPA1-206ENST00000558059 ABCA8O94911 1581 aa14.63□□□□□ -0.07
SNRPA1-206ENST00000558059 P3H3Q8IVL6 736 aa14.62□□□□□ -0.07
SNRPA1-206ENST00000558059 ZCCHC11Q5TAX3 1644 aaKnown RBP14.62□□□□□ -0.07
SNRPA1-206ENST00000558059 TSPOAP1O95153 1857 aa14.61□□□□□ -0.07
SNRPA1-206ENST00000558059 SAMD9Q5K651 1589 aa14.61□□□□□ -0.07
SNRPA1-206ENST00000558059 DCAF8L1A6NGE4 600 aa14.6□□□□□ -0.07
SNRPA1-206ENST00000558059 GLI2P10070 1586 aa14.59□□□□□ -0.07
SNRPA1-206ENST00000558059 EPRSP07814 1512 aaKnown RBP14.56□□□□□ -0.08
SNRPA1-206ENST00000558059 RANGAP1P46060 587 aaPredicted RBP14.56□□□□□ -0.08
SNRPA1-206ENST00000558059 PPRC1Q5VV67 1664 aaKnown RBP14.54□□□□□ -0.08
SNRPA1-206ENST00000558059 WDR7Q9Y4E6 1490 aa14.53□□□□□ -0.08
SNRPA1-206ENST00000558059 EHMT2Q96KQ7 1210 aa14.53□□□□□ -0.08
SNRPA1-206ENST00000558059 FHOD3Q2V2M9 1422 aa14.52□□□□□ -0.08
SNRPA1-206ENST00000558059 UBTFP17480 764 aaKnown RBP14.52□□□□□ -0.09
SNRPA1-206ENST00000558059 RNF39Q9H2S5 420 aa14.52□□□□□ -0.09
SNRPA1-206ENST00000558059 ATP10BO94823 1461 aa14.51□□□□□ -0.09
SNRPA1-206ENST00000558059 MAP3K4Q9Y6R4 1608 aa14.51□□□□□ -0.09
SNRPA1-206ENST00000558059 ARID3CA6NKF2 412 aa14.5□□□□□ -0.09
SNRPA1-206ENST00000558059 CNKSR2Q8WXI2 1034 aa14.5□□□□□ -0.09
SNRPA1-206ENST00000558059 RAPGEF6Q8TEU7 1601 aa14.5□□□□□ -0.09
SNRPA1-206ENST00000558059 KDM6BO15054 1643 aa14.49□□□□□ -0.09
SNRPA1-206ENST00000558059 EFCAB5A4FU69 1503 aa14.49□□□□□ -0.09
SNRPA1-206ENST00000558059 KCNH8Q96L42 1107 aa14.48□□□□□ -0.09
SNRPA1-206ENST00000558059 NUP153P49790 1475 aaKnown RBP14.46□□□□□ -0.09
SNRPA1-206ENST00000558059 RNF216Q9NWF9 866 aaPredicted RBP14.45□□□□□ -0.1
SNRPA1-206ENST00000558059 CFAP43Q8NDM7 1665 aa14.44□□□□□ -0.1
SNRPA1-206ENST00000558059 CD109Q6YHK3 1445 aa14.43□□□□□ -0.1
SNRPA1-206ENST00000558059 TEX14Q8IWB6 1497 aa14.43□□□□□ -0.1
SNRPA1-206ENST00000558059 ARHGAP35Q9NRY4 1499 aa14.43□□□□□ -0.1
SNRPA1-206ENST00000558059 COL17A1Q9UMD9 1497 aaPredicted RBP14.43□□□□□ -0.1
SNRPA1-206ENST00000558059 MAGI3Q5TCQ9 1506 aa14.41□□□□□ -0.1
SNRPA1-206ENST00000558059 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.4□□□□□ -0.1
SNRPA1-206ENST00000558059 HNRNPUL2Q1KMD3 747 aaKnown RBP14.4□□□□□ -0.1
SNRPA1-206ENST00000558059 ABCA9Q8IUA7 1624 aa14.37□□□□□ -0.11
SNRPA1-206ENST00000558059 FMN1Q68DA7 1419 aa14.36□□□□□ -0.11
SNRPA1-206ENST00000558059 PLEKHD1A6NEE1 506 aa14.36□□□□□ -0.11
SNRPA1-206ENST00000558059 CDK13Q14004 1512 aaKnown RBP14.33□□□□□ -0.12
SNRPA1-206ENST00000558059 ATP1B4Q9UN42 357 aaPredicted RBP14.31□□□□□ -0.12
SNRPA1-206ENST00000558059 HECW1Q76N89 1606 aa14.3□□□□□ -0.12
SNRPA1-206ENST00000558059 KDM4FA0A1W2PPD8 638 aa14.3□□□□□ -0.12
SNRPA1-206ENST00000558059 ARAP3Q8WWN8 1544 aa14.3□□□□□ -0.12
SNRPA1-206ENST00000558059 PHLDB1Q86UU1 1377 aa14.28□□□□□ -0.12
SNRPA1-206ENST00000558059 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.28□□□□□ -0.12
SNRPA1-206ENST00000558059 LRRIQ1Q96JM4 1722 aa14.28□□□□□ -0.12
SNRPA1-206ENST00000558059 NEO1Q92859 1461 aa14.27□□□□□ -0.12
SNRPA1-206ENST00000558059 C1QBPQ07021 282 aaKnown RBP14.27□□□□□ -0.13
SNRPA1-206ENST00000558059 CLIP1P30622 1438 aa14.26□□□□□ -0.13
SNRPA1-206ENST00000558059 TTC37Q6PGP7 1564 aa14.26□□□□□ -0.13
SNRPA1-206ENST00000558059 CASKIN1Q8WXD9 1431 aa14.25□□□□□ -0.13
SNRPA1-206ENST00000558059 CDK11AQ9UQ88 783 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms