RNA–Protein interactions for RNA: ENST00000557659.5

CNIH1-206, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 2

Gene CNIH1, Length 856 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-206ENST00000557659 CHD1O14646 1710 aa19.45■□□□□ 0.7
CNIH1-206ENST00000557659 CHMP7Q8WUX9 453 aaPredicted RBP19.43■□□□□ 0.7
CNIH1-206ENST00000557659 FHAD1B1AJZ9 1412 aa19.42■□□□□ 0.7
CNIH1-206ENST00000557659 FBLN2P98095 1184 aa19.41■□□□□ 0.7
CNIH1-206ENST00000557659 ADAMTS12P58397 1594 aa19.4■□□□□ 0.7
CNIH1-206ENST00000557659 CUL7Q14999 1698 aa19.38■□□□□ 0.69
CNIH1-206ENST00000557659 ZBTB22O15209 634 aa19.36■□□□□ 0.69
CNIH1-206ENST00000557659 GRIN2AQ12879 1464 aa19.34■□□□□ 0.69
CNIH1-206ENST00000557659 IGF1RP08069 1367 aa19.32■□□□□ 0.68
CNIH1-206ENST00000557659 RNF216Q9NWF9 866 aaPredicted RBP19.32■□□□□ 0.68
CNIH1-206ENST00000557659 EEA1Q15075 1411 aa19.26■□□□□ 0.67
CNIH1-206ENST00000557659 CLASP1Q7Z460 1538 aa19.26■□□□□ 0.67
CNIH1-206ENST00000557659 NUP160Q12769 1436 aa19.25■□□□□ 0.67
CNIH1-206ENST00000557659 CARMIL1Q5VZK9 1371 aa19.24■□□□□ 0.67
CNIH1-206ENST00000557659 DMRT2Q9Y5R5 561 aa19.2■□□□□ 0.66
CNIH1-206ENST00000557659 CEP170Q5SW79 1584 aa19.19■□□□□ 0.66
CNIH1-206ENST00000557659 RAPGEF2Q9Y4G8 1499 aa19.17■□□□□ 0.66
CNIH1-206ENST00000557659 ARHGEF11O15085 1522 aa19.16■□□□□ 0.66
CNIH1-206ENST00000557659 RUSC2Q8N2Y8 1516 aa19.15■□□□□ 0.66
CNIH1-206ENST00000557659 RIMBP3CA6NJZ7 1639 aa19.14■□□□□ 0.65
CNIH1-206ENST00000557659 RIMBP3BA6NNM3 1639 aa19.14■□□□□ 0.65
CNIH1-206ENST00000557659 RIMBP3Q9UFD9 1639 aa19.14■□□□□ 0.65
CNIH1-206ENST00000557659 KIAA0586Q9BVV6 1533 aa19.12■□□□□ 0.65
CNIH1-206ENST00000557659 HOXD11P31277 338 aaPredicted RBP19.12■□□□□ 0.65
CNIH1-206ENST00000557659 SHROOM2Q13796 1616 aa19.11■□□□□ 0.65
CNIH1-206ENST00000557659 PRXQ9BXM0 1461 aa19.1■□□□□ 0.65
CNIH1-206ENST00000557659 JPH4Q96JJ6 628 aa19.03■□□□□ 0.64
CNIH1-206ENST00000557659 IQGAP2Q13576 1575 aa19.02■□□□□ 0.64
CNIH1-206ENST00000557659 FOXD4L1Q9NU39 408 aa19.02■□□□□ 0.64
CNIH1-206ENST00000557659 CTTNBP2Q8WZ74 1663 aa18.99■□□□□ 0.63
CNIH1-206ENST00000557659 PRG4Q92954 1404 aaPredicted RBP18.99■□□□□ 0.63
CNIH1-206ENST00000557659 ARAP1Q96P48 1450 aa18.98■□□□□ 0.63
CNIH1-206ENST00000557659 KIF21BO75037 1637 aa18.98■□□□□ 0.63
CNIH1-206ENST00000557659 CARMIL2Q6F5E8 1435 aa18.96■□□□□ 0.63
CNIH1-206ENST00000557659 CYB5RLQ6IPT4 315 aa18.93■□□□□ 0.62
CNIH1-206ENST00000557659 UGGT2Q9NYU1 1516 aa18.92■□□□□ 0.62
CNIH1-206ENST00000557659 FAM9AQ8IZU1 332 aaPredicted RBP18.91■□□□□ 0.62
CNIH1-206ENST00000557659 GOLGA3Q08378 1498 aa18.9■□□□□ 0.62
CNIH1-206ENST00000557659 ERCC6L2Q5T890 1561 aa18.89■□□□□ 0.61
CNIH1-206ENST00000557659 TNIKQ9UKE5 1360 aa18.84■□□□□ 0.61
CNIH1-206ENST00000557659 DISP1Q96F81 1524 aa18.82■□□□□ 0.6
CNIH1-206ENST00000557659 KIAA0556O60303 1618 aa18.82■□□□□ 0.6
CNIH1-206ENST00000557659 PTPRGP23470 1445 aa18.8■□□□□ 0.6
CNIH1-206ENST00000557659 SLC4A2P04920 1241 aa18.78■□□□□ 0.6
CNIH1-206ENST00000557659 UBTFP17480 764 aaKnown RBP18.76■□□□□ 0.59
CNIH1-206ENST00000557659 EFCAB5A4FU69 1503 aa18.74■□□□□ 0.59
CNIH1-206ENST00000557659 SAMD9Q5K651 1589 aa18.73■□□□□ 0.59
CNIH1-206ENST00000557659 NPM1P06748 294 aaKnown RBP eCLIP18.71■□□□□ 0.59
CNIH1-206ENST00000557659 UHRF1BP1LA0JNW5 1464 aa18.71■□□□□ 0.59
CNIH1-206ENST00000557659 UACAQ9BZF9 1416 aa18.69■□□□□ 0.58
CNIH1-206ENST00000557659 ADCY10Q96PN6 1610 aa18.67■□□□□ 0.58
CNIH1-206ENST00000557659 ABCC2Q92887 1545 aa18.66■□□□□ 0.58
CNIH1-206ENST00000557659 MAPKBP1O60336 1514 aa18.63■□□□□ 0.57
CNIH1-206ENST00000557659 ABCA8O94911 1581 aa18.6■□□□□ 0.57
CNIH1-206ENST00000557659 TTBK1Q5TCY1 1321 aaPredicted RBP18.6■□□□□ 0.57
CNIH1-206ENST00000557659 KDM5BQ9UGL1 1544 aa18.59■□□□□ 0.57
CNIH1-206ENST00000557659 FMN1Q68DA7 1419 aa18.57■□□□□ 0.56
CNIH1-206ENST00000557659 P3H3Q8IVL6 736 aa18.56■□□□□ 0.56
CNIH1-206ENST00000557659 PLB1Q6P1J6 1458 aa18.56■□□□□ 0.56
CNIH1-206ENST00000557659 RANGAP1P46060 587 aaPredicted RBP18.55■□□□□ 0.56
CNIH1-206ENST00000557659 FHOD3Q2V2M9 1422 aa18.55■□□□□ 0.56
CNIH1-206ENST00000557659 ARHGAP35Q9NRY4 1499 aa18.54■□□□□ 0.56
CNIH1-206ENST00000557659 RAPGEF6Q8TEU7 1601 aa18.54■□□□□ 0.56
CNIH1-206ENST00000557659 TRHP20396 242 aaPredicted RBP18.53■□□□□ 0.56
CNIH1-206ENST00000557659 ZCCHC11Q5TAX3 1644 aaKnown RBP18.51■□□□□ 0.55
CNIH1-206ENST00000557659 CLIP1P30622 1438 aa18.49■□□□□ 0.55
CNIH1-206ENST00000557659 ABCC10Q5T3U5 1492 aa18.49■□□□□ 0.55
CNIH1-206ENST00000557659 ASXL2Q76L83 1435 aa18.47■□□□□ 0.55
CNIH1-206ENST00000557659 DIP2BQ9P265 1576 aa18.44■□□□□ 0.54
CNIH1-206ENST00000557659 HECW1Q76N89 1606 aa18.44■□□□□ 0.54
CNIH1-206ENST00000557659 NUP153P49790 1475 aaKnown RBP18.43■□□□□ 0.54
CNIH1-206ENST00000557659 WDR7Q9Y4E6 1490 aa18.43■□□□□ 0.54
CNIH1-206ENST00000557659 GLI2P10070 1586 aa18.42■□□□□ 0.54
CNIH1-206ENST00000557659 KIF13AQ9H1H9 1805 aa18.42■□□□□ 0.54
CNIH1-206ENST00000557659 ATP10BO94823 1461 aa18.42■□□□□ 0.54
CNIH1-206ENST00000557659 CEP162Q5TB80 1403 aa18.41■□□□□ 0.54
CNIH1-206ENST00000557659 MYCNP04198 464 aaPredicted RBP18.4■□□□□ 0.54
CNIH1-206ENST00000557659 FAM69CQ0P6D2 419 aa18.4■□□□□ 0.54
CNIH1-206ENST00000557659 CASKIN1Q8WXD9 1431 aa18.38■□□□□ 0.53
CNIH1-206ENST00000557659 EPRSP07814 1512 aaKnown RBP18.37■□□□□ 0.53
CNIH1-206ENST00000557659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.36■□□□□ 0.53
CNIH1-206ENST00000557659 HNRNPUL2Q1KMD3 747 aaKnown RBP18.36■□□□□ 0.53
CNIH1-206ENST00000557659 CCDC18Q5T9S5 1454 aa18.36■□□□□ 0.53
CNIH1-206ENST00000557659 FYCO1Q9BQS8 1478 aa18.36■□□□□ 0.53
CNIH1-206ENST00000557659 CDK11AQ9UQ88 783 aaPredicted RBP18.36■□□□□ 0.53
CNIH1-206ENST00000557659 LOC105371045A0A1W2PR82 267 aa18.35■□□□□ 0.53
CNIH1-206ENST00000557659 PLEKHD1A6NEE1 506 aa18.34■□□□□ 0.53
CNIH1-206ENST00000557659 CFAP43Q8NDM7 1665 aa18.31■□□□□ 0.52
CNIH1-206ENST00000557659 PCF11O94913 1555 aaKnown RBP18.31■□□□□ 0.52
CNIH1-206ENST00000557659 ATXN8OSP0DMR3 200 aa18.31■□□□□ 0.52
CNIH1-206ENST00000557659 MAP3K4Q9Y6R4 1608 aa18.31■□□□□ 0.52
CNIH1-206ENST00000557659 ATP1B4Q9UN42 357 aaPredicted RBP18.3■□□□□ 0.52
CNIH1-206ENST00000557659 TEX14Q8IWB6 1497 aa18.29■□□□□ 0.52
CNIH1-206ENST00000557659 ARID3CA6NKF2 412 aa18.27■□□□□ 0.52
CNIH1-206ENST00000557659 CDK13Q14004 1512 aaKnown RBP18.26■□□□□ 0.51
CNIH1-206ENST00000557659 ABCA9Q8IUA7 1624 aa18.26■□□□□ 0.51
CNIH1-206ENST00000557659 KCNH8Q96L42 1107 aa18.25■□□□□ 0.51
CNIH1-206ENST00000557659 CD109Q6YHK3 1445 aa18.23■□□□□ 0.51
CNIH1-206ENST00000557659 VPS8Q8N3P4 1428 aa18.23■□□□□ 0.51
CNIH1-206ENST00000557659 MAGI3Q5TCQ9 1506 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms