RNA–Protein interactions for RNA: ENST00000557510.5

NPC2-209, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 1 (best) BASIC

Gene NPC2, Length 1,029 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-209ENST00000557510 TRHP20396 242 aaPredicted RBP16.19■□□□□ 0.18
NPC2-209ENST00000557510 GRIN2AQ12879 1464 aa16.18■□□□□ 0.18
NPC2-209ENST00000557510 CEP170Q5SW79 1584 aa16.17■□□□□ 0.18
NPC2-209ENST00000557510 ERCC6L2Q5T890 1561 aa16.17■□□□□ 0.18
NPC2-209ENST00000557510 NUP160Q12769 1436 aa16.12■□□□□ 0.17
NPC2-209ENST00000557510 FHAD1B1AJZ9 1412 aa16.1■□□□□ 0.17
NPC2-209ENST00000557510 ERICH3Q5RHP9 1530 aa16.09■□□□□ 0.17
NPC2-209ENST00000557510 SHROOM2Q13796 1616 aa16.08■□□□□ 0.17
NPC2-209ENST00000557510 NCBP3Q53F19 620 aaKnown RBP16.02■□□□□ 0.16
NPC2-209ENST00000557510 RUSC2Q8N2Y8 1516 aa15.97■□□□□ 0.15
NPC2-209ENST00000557510 PRG4Q92954 1404 aaPredicted RBP15.96■□□□□ 0.15
NPC2-209ENST00000557510 JPH4Q96JJ6 628 aa15.92■□□□□ 0.14
NPC2-209ENST00000557510 IGF1RP08069 1367 aa15.9■□□□□ 0.14
NPC2-209ENST00000557510 KIF13AQ9H1H9 1805 aa15.9■□□□□ 0.14
NPC2-209ENST00000557510 NPM3O75607 178 aaKnown RBP15.9■□□□□ 0.14
NPC2-209ENST00000557510 SCAF1Q9H7N4 1312 aaKnown RBP15.9■□□□□ 0.14
NPC2-209ENST00000557510 KIF27Q86VH2 1401 aa15.88■□□□□ 0.13
NPC2-209ENST00000557510 CUL7Q14999 1698 aa15.87■□□□□ 0.13
NPC2-209ENST00000557510 CNKSR2Q8WXI2 1034 aa15.84■□□□□ 0.13
NPC2-209ENST00000557510 KIAA0586Q9BVV6 1533 aa15.84■□□□□ 0.13
NPC2-209ENST00000557510 ADCY10Q96PN6 1610 aa15.83■□□□□ 0.12
NPC2-209ENST00000557510 MAPK8IP2Q13387 824 aaPredicted RBP15.82■□□□□ 0.12
NPC2-209ENST00000557510 EHMT2Q96KQ7 1210 aa15.82■□□□□ 0.12
NPC2-209ENST00000557510 CARMIL1Q5VZK9 1371 aa15.77■□□□□ 0.12
NPC2-209ENST00000557510 SLC4A1APQ9BWU0 796 aaKnown RBP15.77■□□□□ 0.12
NPC2-209ENST00000557510 MAPKBP1O60336 1514 aa15.75■□□□□ 0.11
NPC2-209ENST00000557510 ABCC10Q5T3U5 1492 aa15.74■□□□□ 0.11
NPC2-209ENST00000557510 DIP2BQ9P265 1576 aa15.74■□□□□ 0.11
NPC2-209ENST00000557510 FAM69CQ0P6D2 419 aa15.71■□□□□ 0.11
NPC2-209ENST00000557510 IQGAP2Q13576 1575 aa15.7■□□□□ 0.1
NPC2-209ENST00000557510 NPM1P06748 294 aaKnown RBP eCLIP15.7■□□□□ 0.1
NPC2-209ENST00000557510 TTBK1Q5TCY1 1321 aaPredicted RBP15.69■□□□□ 0.1
NPC2-209ENST00000557510 PTPRGP23470 1445 aa15.68■□□□□ 0.1
NPC2-209ENST00000557510 TSPOAP1O95153 1857 aa15.68■□□□□ 0.1
NPC2-209ENST00000557510 TNIKQ9UKE5 1360 aa15.65■□□□□ 0.1
NPC2-209ENST00000557510 DISP1Q96F81 1524 aa15.65■□□□□ 0.1
NPC2-209ENST00000557510 CARMIL2Q6F5E8 1435 aa15.64■□□□□ 0.09
NPC2-209ENST00000557510 RAPGEF2Q9Y4G8 1499 aa15.64■□□□□ 0.09
NPC2-209ENST00000557510 ABCC2Q92887 1545 aa15.62■□□□□ 0.09
NPC2-209ENST00000557510 UGGT2Q9NYU1 1516 aa15.6■□□□□ 0.09
NPC2-209ENST00000557510 KDM6BO15054 1643 aa15.58■□□□□ 0.09
NPC2-209ENST00000557510 KIAA0556O60303 1618 aa15.58■□□□□ 0.09
NPC2-209ENST00000557510 ASXL2Q76L83 1435 aa15.58■□□□□ 0.08
NPC2-209ENST00000557510 UHRF1BP1LA0JNW5 1464 aa15.58■□□□□ 0.08
NPC2-209ENST00000557510 PPRC1Q5VV67 1664 aaKnown RBP15.57■□□□□ 0.08
NPC2-209ENST00000557510 UACAQ9BZF9 1416 aa15.57■□□□□ 0.08
NPC2-209ENST00000557510 CTTNBP2Q8WZ74 1663 aa15.57■□□□□ 0.08
NPC2-209ENST00000557510 ZCCHC11Q5TAX3 1644 aaKnown RBP15.54■□□□□ 0.08
NPC2-209ENST00000557510 PLB1Q6P1J6 1458 aa15.53■□□□□ 0.08
NPC2-209ENST00000557510 GLI2P10070 1586 aa15.53■□□□□ 0.08
NPC2-209ENST00000557510 KDM5BQ9UGL1 1544 aa15.53■□□□□ 0.08
NPC2-209ENST00000557510 CSRNP3Q8WYN3 585 aa15.51■□□□□ 0.07
NPC2-209ENST00000557510 PRXQ9BXM0 1461 aa15.5■□□□□ 0.07
NPC2-209ENST00000557510 EPRSP07814 1512 aaKnown RBP15.49■□□□□ 0.07
NPC2-209ENST00000557510 MAP3K4Q9Y6R4 1608 aa15.48■□□□□ 0.07
NPC2-209ENST00000557510 KDM4FA0A1W2PPD8 638 aa15.45■□□□□ 0.06
NPC2-209ENST00000557510 DMRT2Q9Y5R5 561 aa15.45■□□□□ 0.06
NPC2-209ENST00000557510 COL17A1Q9UMD9 1497 aaPredicted RBP15.45■□□□□ 0.06
NPC2-209ENST00000557510 ABCA8O94911 1581 aa15.45■□□□□ 0.06
NPC2-209ENST00000557510 RNF216Q9NWF9 866 aaPredicted RBP15.44■□□□□ 0.06
NPC2-209ENST00000557510 GOLGA3Q08378 1498 aa15.42■□□□□ 0.06
NPC2-209ENST00000557510 WDR7Q9Y4E6 1490 aa15.41■□□□□ 0.06
NPC2-209ENST00000557510 TEX14Q8IWB6 1497 aa15.36■□□□□ 0.05
NPC2-209ENST00000557510 P3H3Q8IVL6 736 aa15.35■□□□□ 0.05
NPC2-209ENST00000557510 CFAP43Q8NDM7 1665 aa15.35■□□□□ 0.05
NPC2-209ENST00000557510 ARID3CA6NKF2 412 aa15.34■□□□□ 0.05
NPC2-209ENST00000557510 SAMD9Q5K651 1589 aa15.33■□□□□ 0.05
NPC2-209ENST00000557510 KCNH8Q96L42 1107 aa15.33■□□□□ 0.04
NPC2-209ENST00000557510 ADGRL1O94910 1474 aa15.32■□□□□ 0.04
NPC2-209ENST00000557510 CD109Q6YHK3 1445 aa15.31■□□□□ 0.04
NPC2-209ENST00000557510 ZBTB22O15209 634 aa15.3■□□□□ 0.04
NPC2-209ENST00000557510 ATP10BO94823 1461 aa15.3■□□□□ 0.04
NPC2-209ENST00000557510 HOXD11P31277 338 aaPredicted RBP15.3■□□□□ 0.04
NPC2-209ENST00000557510 MAGI3Q5TCQ9 1506 aa15.3■□□□□ 0.04
NPC2-209ENST00000557510 RAPGEF6Q8TEU7 1601 aa15.27■□□□□ 0.03
NPC2-209ENST00000557510 FAM9AQ8IZU1 332 aaPredicted RBP15.25■□□□□ 0.03
NPC2-209ENST00000557510 RANGAP1P46060 587 aaPredicted RBP15.24■□□□□ 0.03
NPC2-209ENST00000557510 ABCA9Q8IUA7 1624 aa15.23■□□□□ 0.03
NPC2-209ENST00000557510 EEA1Q15075 1411 aa15.23■□□□□ 0.03
NPC2-209ENST00000557510 FHOD3Q2V2M9 1422 aa15.23■□□□□ 0.03
NPC2-209ENST00000557510 NUP153P49790 1475 aaKnown RBP15.22■□□□□ 0.03
NPC2-209ENST00000557510 POTEDQ86YR6 584 aa15.21■□□□□ 0.03
NPC2-209ENST00000557510 KIF21BO75037 1637 aa15.21■□□□□ 0.02
NPC2-209ENST00000557510 ARAP3Q8WWN8 1544 aa15.18■□□□□ 0.02
NPC2-209ENST00000557510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.15■□□□□ 0.02
NPC2-209ENST00000557510 HNRNPUL2Q1KMD3 747 aaKnown RBP15.15■□□□□ 0.02
NPC2-209ENST00000557510 FRMPD1Q5SYB0 1578 aa15.14■□□□□ 0.01
NPC2-209ENST00000557510 EFCAB5A4FU69 1503 aa15.13■□□□□ 0.01
NPC2-209ENST00000557510 HECW2Q9P2P5 1572 aa15.13■□□□□ 0.01
NPC2-209ENST00000557510 RAPGEF3O95398 923 aa15.11■□□□□ 0.01
NPC2-209ENST00000557510 NEO1Q92859 1461 aa15.11■□□□□ 0.01
NPC2-209ENST00000557510 CDK13Q14004 1512 aaKnown RBP15.09■□□□□ 0.01
NPC2-209ENST00000557510 TTC37Q6PGP7 1564 aa15.09■□□□□ 0.01
NPC2-209ENST00000557510 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.08■□□□□ 0.01
NPC2-209ENST00000557510 PHLDB1Q86UU1 1377 aa15.08■□□□□ 0
NPC2-209ENST00000557510 RICTORQ6R327 1708 aa15.06■□□□□ 0
NPC2-209ENST00000557510 ADAMTSL3P82987 1691 aa15.06■□□□□ 0
NPC2-209ENST00000557510 PLEKHD1A6NEE1 506 aa15.05■□□□□ -0
NPC2-209ENST00000557510 FOXD4L1Q9NU39 408 aa15.05■□□□□ -0
NPC2-209ENST00000557510 ARHGAP35Q9NRY4 1499 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms