RNA–Protein interactions for RNA: ENST00000557510.5

NPC2-209, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 1 (best) BASIC

Gene NPC2, Length 1,029 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-209ENST00000557510 AEBP2Q6ZN18 517 aaPredicted RBP22.89■■□□□ 1.25
NPC2-209ENST00000557510 NISCHQ9Y2I1 1504 aa22.79■■□□□ 1.24
NPC2-209ENST00000557510 CHIC1Q5VXU3 224 aa22.68■■□□□ 1.22
NPC2-209ENST00000557510 ABCC9O60706 1549 aa20.47■□□□□ 0.87
NPC2-209ENST00000557510 CCDC180Q9P1Z9 1646 aa20.45■□□□□ 0.86
NPC2-209ENST00000557510 PHF23Q9BUL5 403 aaPredicted RBP20.06■□□□□ 0.8
NPC2-209ENST00000557510 RB1CC1Q8TDY2 1594 aa19.43■□□□□ 0.7
NPC2-209ENST00000557510 NACADO15069 1562 aa19.3■□□□□ 0.68
NPC2-209ENST00000557510 DNAJC5BQ9UF47 199 aa19.23■□□□□ 0.67
NPC2-209ENST00000557510 SENP3Q9H4L4 574 aaPredicted RBP19.22■□□□□ 0.67
NPC2-209ENST00000557510 DCAF8L2P0C7V8 631 aa19.2■□□□□ 0.66
NPC2-209ENST00000557510 UNC13AQ9UPW8 1703 aa19.12■□□□□ 0.65
NPC2-209ENST00000557510 PABPN1Q86U42 306 aaKnown RBP eCLIP19.05■□□□□ 0.64
NPC2-209ENST00000557510 MYO15BQ96JP2 1530 aa19.01■□□□□ 0.63
NPC2-209ENST00000557510 BICRAQ9NZM4 1560 aa18.95■□□□□ 0.62
NPC2-209ENST00000557510 ZCCHC6Q5VYS8 1495 aaKnown RBP18.9■□□□□ 0.62
NPC2-209ENST00000557510 DCAF1Q9Y4B6 1507 aa18.79■□□□□ 0.6
NPC2-209ENST00000557510 SCRIBQ14160 1630 aa18.67■□□□□ 0.58
NPC2-209ENST00000557510 SHROOM4Q9ULL8 1493 aa18.57■□□□□ 0.56
NPC2-209ENST00000557510 PLPPR3Q6T4P5 718 aa18.53■□□□□ 0.56
NPC2-209ENST00000557510 CC2D2AQ9P2K1 1620 aa18.49■□□□□ 0.55
NPC2-209ENST00000557510 EIF4G1Q04637 1599 aaKnown RBP18.44■□□□□ 0.54
NPC2-209ENST00000557510 CECR2Q9BXF3 1484 aa18.41■□□□□ 0.54
NPC2-209ENST00000557510 FOXD1Q16676 465 aa17.87■□□□□ 0.45
NPC2-209ENST00000557510 NCAPD3P42695 1498 aa17.82■□□□□ 0.44
NPC2-209ENST00000557510 SMARCA4P51532 1647 aa17.8■□□□□ 0.44
NPC2-209ENST00000557510 ATAD2BQ9ULI0 1458 aa17.79■□□□□ 0.44
NPC2-209ENST00000557510 SMARCA2P51531 1590 aa17.71■□□□□ 0.43
NPC2-209ENST00000557510 HMGXB3Q12766 1538 aa17.7■□□□□ 0.42
NPC2-209ENST00000557510 BAZ1AQ9NRL2 1556 aaPredicted RBP17.66■□□□□ 0.42
NPC2-209ENST00000557510 ERCC6Q03468 1493 aa17.62■□□□□ 0.41
NPC2-209ENST00000557510 NESP48681 1621 aa17.61■□□□□ 0.41
NPC2-209ENST00000557510 BAZ1BQ9UIG0 1483 aaKnown RBP17.6■□□□□ 0.41
NPC2-209ENST00000557510 PEG3Q9GZU2 1588 aa17.6■□□□□ 0.41
NPC2-209ENST00000557510 MROH2BQ7Z745 1585 aa17.59■□□□□ 0.41
NPC2-209ENST00000557510 CUX2O14529 1486 aa17.57■□□□□ 0.4
NPC2-209ENST00000557510 DNAJC5Q9H3Z4 198 aa17.57■□□□□ 0.4
NPC2-209ENST00000557510 PPP6R1Q9UPN7 881 aa17.57■□□□□ 0.4
NPC2-209ENST00000557510 ADRA2BP18089 450 aa17.54■□□□□ 0.4
NPC2-209ENST00000557510 THOC2Q8NI27 1593 aaKnown RBP17.42■□□□□ 0.38
NPC2-209ENST00000557510 LAMC3Q9Y6N6 1575 aa17.41■□□□□ 0.38
NPC2-209ENST00000557510 WIZO95785 1651 aa17.41■□□□□ 0.38
NPC2-209ENST00000557510 KIF21AQ7Z4S6 1674 aa17.4■□□□□ 0.38
NPC2-209ENST00000557510 PDS5BQ9NTI5 1447 aa17.28■□□□□ 0.36
NPC2-209ENST00000557510 CADPSQ9ULU8 1353 aa17.27■□□□□ 0.35
NPC2-209ENST00000557510 RSF1Q96T23 1441 aaPredicted RBP17.21■□□□□ 0.34
NPC2-209ENST00000557510 MRC2Q9UBG0 1479 aa17.18■□□□□ 0.34
NPC2-209ENST00000557510 WDR62O43379 1518 aa17.16■□□□□ 0.34
NPC2-209ENST00000557510 TOP2AP11388 1531 aaKnown RBP17.14■□□□□ 0.33
NPC2-209ENST00000557510 FANCD2Q9BXW9 1451 aa17.1■□□□□ 0.33
NPC2-209ENST00000557510 CEP164Q9UPV0 1460 aa17.1■□□□□ 0.33
NPC2-209ENST00000557510 CFTRP13569 1480 aa17.09■□□□□ 0.33
NPC2-209ENST00000557510 URB2Q14146 1524 aaKnown RBP16.99■□□□□ 0.31
NPC2-209ENST00000557510 PRDM2Q13029 1718 aa16.98■□□□□ 0.31
NPC2-209ENST00000557510 CCDC88BA6NC98 1476 aa16.95■□□□□ 0.3
NPC2-209ENST00000557510 PIAS4Q8N2W9 510 aaPredicted RBP16.89■□□□□ 0.29
NPC2-209ENST00000557510 TRIM41Q8WV44 630 aa16.82■□□□□ 0.28
NPC2-209ENST00000557510 TOPBP1Q92547 1522 aa16.8■□□□□ 0.28
NPC2-209ENST00000557510 ZNF608Q9ULD9 1512 aaPredicted RBP16.79■□□□□ 0.28
NPC2-209ENST00000557510 OSCARQ8IYS5 282 aa16.75■□□□□ 0.27
NPC2-209ENST00000557510 IFT140Q96RY7 1462 aa16.74■□□□□ 0.27
NPC2-209ENST00000557510 DNMBPQ6XZF7 1577 aa16.72■□□□□ 0.27
NPC2-209ENST00000557510 EIF4G3O43432 1585 aaKnown RBP16.69■□□□□ 0.26
NPC2-209ENST00000557510 ABCC8Q09428 1581 aa16.68■□□□□ 0.26
NPC2-209ENST00000557510 TARBP1Q13395 1621 aaKnown RBP16.67■□□□□ 0.26
NPC2-209ENST00000557510 POLA1P09884 1462 aaPredicted RBP16.62■□□□□ 0.25
NPC2-209ENST00000557510 RIMBP3CA6NJZ7 1639 aa16.62■□□□□ 0.25
NPC2-209ENST00000557510 RIMBP3BA6NNM3 1639 aa16.62■□□□□ 0.25
NPC2-209ENST00000557510 RIMBP3Q9UFD9 1639 aa16.62■□□□□ 0.25
NPC2-209ENST00000557510 AQRO60306 1485 aaKnown RBP eCLIP16.61■□□□□ 0.25
NPC2-209ENST00000557510 CHD1O14646 1710 aa16.59■□□□□ 0.25
NPC2-209ENST00000557510 RAD54L2Q9Y4B4 1467 aa16.59■□□□□ 0.25
NPC2-209ENST00000557510 KCNA4P22459 653 aa16.56■□□□□ 0.24
NPC2-209ENST00000557510 ARHGEF11O15085 1522 aa16.55■□□□□ 0.24
NPC2-209ENST00000557510 CUX1P39880 1505 aa16.53■□□□□ 0.24
NPC2-209ENST00000557510 FGD5Q6ZNL6 1462 aa16.52■□□□□ 0.23
NPC2-209ENST00000557510 TDRD9Q8NDG6 1382 aaKnown RBP16.51■□□□□ 0.23
NPC2-209ENST00000557510 SOGA1O94964 1423 aa16.51■□□□□ 0.23
NPC2-209ENST00000557510 FBLN2P98095 1184 aa16.46■□□□□ 0.23
NPC2-209ENST00000557510 WDR97A6NE52 1622 aa16.45■□□□□ 0.22
NPC2-209ENST00000557510 SNAPC4Q5SXM2 1469 aa16.44■□□□□ 0.22
NPC2-209ENST00000557510 SUPT5HO00267 1087 aaKnown RBP16.44■□□□□ 0.22
NPC2-209ENST00000557510 PPP4R3CPQ6ZMV5 832 aa16.43■□□□□ 0.22
NPC2-209ENST00000557510 CYB5RLQ6IPT4 315 aa16.4■□□□□ 0.22
NPC2-209ENST00000557510 ARAP1Q96P48 1450 aa16.4■□□□□ 0.22
NPC2-209ENST00000557510 PBRM1Q86U86 1689 aa16.37■□□□□ 0.21
NPC2-209ENST00000557510 CLASP1Q7Z460 1538 aa16.37■□□□□ 0.21
NPC2-209ENST00000557510 GRIN2BQ13224 1484 aa16.36■□□□□ 0.21
NPC2-209ENST00000557510 MAGI1Q96QZ7 1491 aaPredicted RBP16.36■□□□□ 0.21
NPC2-209ENST00000557510 ABCA5Q8WWZ7 1642 aa16.33■□□□□ 0.2
NPC2-209ENST00000557510 SYNJ2O15056 1496 aa16.32■□□□□ 0.2
NPC2-209ENST00000557510 GAPVD1Q14C86 1478 aa16.32■□□□□ 0.2
NPC2-209ENST00000557510 CHMP7Q8WUX9 453 aaPredicted RBP16.32■□□□□ 0.2
NPC2-209ENST00000557510 SYNJ1O43426 1573 aa16.31■□□□□ 0.2
NPC2-209ENST00000557510 ABCA10Q8WWZ4 1543 aa16.31■□□□□ 0.2
NPC2-209ENST00000557510 BIVM-ERCC5R4GMW8 1640 aa16.25■□□□□ 0.19
NPC2-209ENST00000557510 TOP2BQ02880 1626 aa16.24■□□□□ 0.19
NPC2-209ENST00000557510 WRNQ14191 1432 aaPredicted RBP eCLIP16.21■□□□□ 0.19
NPC2-209ENST00000557510 MSH5O43196 834 aa16.21■□□□□ 0.19
NPC2-209ENST00000557510 ADAMTS12P58397 1594 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms